Nucleotide Global Alignment

Description

Query:
TRCN0000467195
Subject:
XR_001751185.1
Aligned Length:
3520
Identities:
1851
Gaps:
1669

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAAAAACAGGAAGTGCCTACGGAGGCCGGGCCGGCAGCGGCGGCCGGGCATGAAGCCGGGCGGCTACGGGATCG  74

Query    1  ---------------------------------ATGAGCGACATAGTGGAGAAGACGCTGACGGCGCTGCCGGG  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGGGCGGCGGCGGCATCGCGGGCGGCGGCGGCGATGAGCGACATAGTGGAGAAGACGCTGACGGCGCTGCCGGG  148

Query   42  ACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTCGAGGCTGGGCAGCC  115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTCGAGGCTGGGCAGCC  222

Query  116  TTGTCCGCGGCATCACAGCCCTCACCTCCAAGCACGAAGAAGAAAAATTAATCCAGCAGGAACTGAGTAGTCTG  189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTGTCCGCGGCATCACAGCCCTCACCTCCAAGCACGAAGAAGAAAAATTAATCCAGCAGGAACTGAGTAGTCTG  296

Query  190  AAAGCGACTGTTTCTGCTCCTACTACAACACTGAAAATGATGAAGGAATGTATGGTGAGACTTATATATTGTGA  263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAAGCGACTGTTTCTGCTCCTACTACAACACTGAAAATGATGAAGGAATGTATGGTGAGACTTATATATTGTGA  370

Query  264  AATGCTTGGATATGATGCTTCCTTTGGCTATATTCATGCAATCAAGTTAGCCCAACAAGGAAACCTCTTAGAAA  337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATGCTTGGATATGATGCTTCCTTTGGCTATATTCATGCAATCAAGTTAGCCCAACAAGGAAACCTCTTAGAAA  444

Query  338  AAAGAGTAGGTTATTTGGCTGTTTCCTTATTTCTACATGAAAGTCATGAATTATTGCTTCTCCTTGTGAATACA  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAAGAGTAGGTTATTTGGCTGTTTCCTTATTTCTACATGAAAGTCATGAATTATTGCTTCTCCTTGTGAATACA  518

Query  412  GTTGTAAAGGATCTGCAGAGCACTAACCTAGTAGAAGTGTGTATGGCACTGACTGTTGTTAGCCAGATTTTCCC  485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTTGTAAAGGATCTGCAGAGCACTAACCTAGTAGAAGTGTGTATGGCACTGACTGTTGTTAGCCAGATTTTCCC  592

Query  486  CTGCGAAATGATTCCAGCTGTTCTTCCATTAATAGAAGATAAACTTCAACATTCTAAGGAGATTGTACGAAGAA  559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGCGAAATGATTCCAGCTGTTCTTCCATTAATAGAAGATAAACTTCAACATTCTAAGGAGATTGTACGAAGAA  666

Query  560  AAGCTGTTCTGGCATTATACAAATTCCATCTCATTGCTCCTAATCAAGTACAACATATTCATATTAAGTTTCGG  633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGCTGTTCTGGCATTATACAAATTCCATCTCATTGCTCCTAATCAAGTACAACATATTCATATTAAGTTTCGG  740

Query  634  AAAGCACTTTGTGACAGAGATGTTGGGGTCATGGCTGCCTCCTTGCATATATATCTTAGAATGATTAAGGAGAA  707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAAGCACTTTGTGACAGAGATGTTGGGGTCATGGCTGCCTCCTTGCATATATATCTTAGAATGATTAAGGAGAA  814

Query  708  TTCATCTGGATATAAAGACTTGACTGGGAGTTTTGTAACCATTTTGAAGCAAGTAGTTGGAGGAAAGCTCCCAG  781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTCATCTGGATATAAAGACTTGACTGGGAGTTTTGTAACCATTTTGAAGCAAGTAGTTGGAGGAAAGCTCCCAG  888

Query  782  TAGAATTCAATTACCACAGTGTGCCAGCACCATGGTTACAAATTCAGCTCTTGAGAATACTGGGACTTCTAGGA  855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TAGAATTCAATTACCACAGTGTGCCAGCACCATGGTTACAAATTCAGCTCTTGAGAATACTGGGACTTCTAGGA  962

Query  856  AAAGATGATCAAAGGACAAGTGAATTAATGTATGATGTTCTTGATGAATCCTTACGAAGAGCTGAGTTAAATCA  929
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AAAGATGATCAAAGGACAAGTGAATTAATGTATGATGTTCTTGATGAATCCTTACGAAGAGCTGAGTTAAATCA  1036

Query  930  CAATGTCACATATGCTATTTTGTTTGAATGTGTGCATACAGTCTATTCTATTTATCCTAAATCGGAATTACTTG  1003
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CAATGTCACATATGCTATTTTGTTTGAATGTGTGCATACAGTCTATTCTATTTATCCTAAATCGGAATTACTTG  1110

Query 1004  AGAAGGCTGCCAAGTGCATTGGAAAATTTGTTCTGTCACCTAAAATAAATCTAAAATATTTAGGACTGAAGGCT  1077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGAAGGCTGCCAAGTGCATTGGAAAATTTGTTCTGTCACCTAAAATAAATCTAAAATATTTAGGACTGAAGGCT  1184

Query 1078  CTTACCTATGTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGATCA  1151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CTTACCTATGTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGATCA  1258

Query 1152  TCCTGATCCCATTATTAAAAGAGAGACTCTGGAACTTCTTTACAGAATTACTAATGCACAGAATATAACAGTTA  1225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCCTGATCCCATTATTAAAAGAGAGACTCTGGAACTTCTTTACAGAATTACTAATGCACAGAATATAACAGTTA  1332

Query 1226  TTGTCCAGAAAATGCTTGAATATTTACATCAGAGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATA  1299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TTGTCCAGAAAATGCTTGAATATTTACATCAGAGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATA  1406

Query 1300  GCAGAGCTGGCTGAGAA--ATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCTGTGTTTTCAGTA  1371
            |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCAGAGCTGGCTGAGAAACATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCTGTGTTTTCAGTA  1480

Query 1372  GGAGGAGATGTAATGCATCCTGATATTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAAC  1445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GGAGGAGATGTAATGCATCCTGATATTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAAC  1554

Query 1446  AGAAGATCAGCAATTAAGACTCTATGCAGTTCAGTCTTATCTCACTTTACTGGATATGGAAAATGTGTTCTATC  1519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AGAAGATCAGCAATTAAGACTCTATGCAGTTCAGTCTTATCTCACTTTACTGGATATGGAAAATGTGTTCTATC  1628

Query 1520  CACAGAGATTTCTTCAAGTTATGAGTTGGGTATTAGGGGAATATTCCTACCTCTTAGATAAGGAAACGCCAGAG  1593
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CACAGAGATTTCTTCAAGTTATGAGTTGGGTATTAGGGGAATATTCCTACCTCTTAGATAAGGAAACGCCAGAG  1702

Query 1594  GAAGTTATAGCTAAGCTCTACAAGTTACTTATGAATGACTCTGTGTCTTCAGAAACAAAAGCCTGGTTAATTGC  1667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GAAGTTATAGCTAAGCTCTACAAGTTACTTATGAATGACTCTGTGTCTTCAGAAACAAAAGCCTGGTTAATTGC  1776

Query 1668  TGCTGTGACCAAATTGACATCTCAGGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATAT  1741
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TGCTGTGACCAAATTGACATCTCAGGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATAT  1850

Query 1742  CTTTGGATACTTGTATGAGACAACATGCATTTGAATTAAAACATTTGCATGAGAATGTGGAACTTATGAAGAGC  1815
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CTTTGGATACTTGTATGAGACAACATGCATTTGAATTAAAACATTTGCATGAGAATGTGGAACTTATGAAGAGC  1924

Query 1816  TTGCTTCCAGTTGACAGGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTGTGGC  1889
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct 1925  TTGCTTCCAGTTGACAGGAGTTGTGAAGACTTGGTG--------------------------------------  1960

Query 1890  TGAAGGACTCAGTCAGGGTGCAGCGCCTTACAAACCTCCCCATCAACGCCAGGAGGAAAAGCTTTCTCAGGAAA  1963
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 1964  AAGTTCTCAATTTTGAACCATATGGACTCTCCTTTTCTTCATCTGGCTTCACTGGACGACAGTCTCCTGCTGGC  2037
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2038  ATTTCTCTTGGTTCAGATGTATCTGGGAATAGTGCTGAGACAGGACTGAAAGAGACAAATAGCTTGAAGCTGGA  2111
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2112  AGGTATAAAGAAATTGTGGGGGAAAGAAGGCTATCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAAGTGGAG  2185
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2186  CTCTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAGATCAAGCTATAACTAAAAAGGATCAATCTCAAGTT  2259
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2260  CTTACCCAATCTAAAGAGGAGAAAGAAAAGCAGCTGCTGGCATCATCATTATTTGTTGGTCTAGGATCAGAAAG  2333
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2334  TACAATCAACCTGCTGGGAAAAGCAGATACTGTCTCTCACAAGTTCAGAAGGAAATCAAAAGTCAAAGAAGCTA  2407
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2408  AAAGTGGCGAAACAACCAGTACTCATAATATGACCTGTTCTTCCTTTAGTTCTTTGTCAAATGTGGCATATGAA  2481
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2482  GATGATTATTATTCGAATACTTTGCACGATACAGGAGACAAGGAATTAAAGAAATTTTCTCTCACTTCAGAACT  2555
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2556  TTTGGATTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCTGTCTACACCTTCAT  2629
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2630  TGTTTGCTAATAACAACATGGAAATTTTTCACCCTCCTCAATCTACTGCAGCCTCAGTTGCCAAGGAAAGCTCT  2703
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2704  TTAGCTTCATCTTTTTTGGAAGAAACTACTGAATACATACACTCAAATGCTATGGAAGTCTGTAATAATGAAAC  2777
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2778  TATATCAGTGTCTTCTTATAAAATTTGGAAAGATGATTGTTTATTGATGGTCTGGTCAGTCACTAATAAGAGTG  2851
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2852  GTTTGGAATTGAAAAGTGCTGACTTAGAAATTTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAACCTGGATGC  2925
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 2926  TGTTTGCCTGTAATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCTTTTACAGA  2999
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 3000  AGGAAATCTTACTGGTTTTATTAGTTATCATATGATGGATACTCATTCTGCTCAGCTGGAATTTTCTGTAAACT  3073
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 3074  TATCACTATTAGATTTCATTAGACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCA  3147
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 3148  AATGATGTGAAACAAAATGTAAAAATGTCAGAATCTCAAGCTGCACTTCCTTCTGCACTAAAGACTCTGCAACA  3221
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 3222  GAAACTAAGACTCCATATTATTGAGATTATAGGCAATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCC  3295
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 3296  CCTGCTTACTGCATTGCCGAGTTCATGCAGATGTATTAGCCCTGTGGTTCAGATCCTCCTGTTCTACTCTTCCT  3369
                                                                                      
Sbjct 1961  --------------------------------------------------------------------------  1960

Query 3370  GACTATTTACTGTATCAGTGTCAAAAGGTGATGGAGGGATCC  3411
                                                      
Sbjct 1961  ------------------------------------------  1960

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