Nucleotide Global Alignment
Description
- Query:
- TRCN0000467565
- Subject:
- XR_001752493.1
- Aligned Length:
- 2563
- Identities:
- 1380
- Gaps:
- 1168
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTAGAAATGGCTGTGGCTACTCTTCGGCAGTCAGTGGAGGAAGTGAAAAAAAACACGGGGTCACAGGTATTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGAAAACTCAAACTGTTTTTCCTCTACTCTGATACCACAAGAATCATCAGCACAGAGGAAGACTTCTGTGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAATGTGGTGGGAGAGGGAGGTTTTCACCAGCACATGAGCAGTCAGTTCTGCCGCAGACTCGGCGGGTGTCCTT 222
Query 1 -------------------------------------------------------ATGCTGCCACTGGGCTCAG 19
|||||||||||||||||||
Sbjct 223 CGGTTCAGTTCCAACACCGCCTGCCTGGAGAGAGGTCAGACCACAGGCGGCCACCATGCTGCCACTGGGCTCAG 296
Query 20 AGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTG 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTG 370
Query 94 CAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGGA 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGGA 444
Query 168 CTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAGG 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAGG 518
Query 242 CCAGGGAGTGGGAGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGCG 315
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCAGGGAGTGGGAAGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGCG 592
Query 316 CTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGA 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGA 666
Query 390 GCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGA 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGA 740
Query 464 CACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGAA 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGAA 814
Query 538 TCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGA 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGA 888
Query 612 GCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTGC 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTGC 962
Query 686 AGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGATCTGGAG 759
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 963 AGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAG 1036
Query 760 GCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGA 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGA 1110
Query 834 GGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGA 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGA 1184
Query 908 AGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTC 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTC 1258
Query 982 GAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACT 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACT 1332
Query 1056 TCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCA 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCA 1406
Query 1130 GAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGAC 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGAC 1480
Query 1204 ATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCT 1277
||||||
Sbjct 1481 ATTGAA-------------------------------------------------------------------- 1486
Query 1278 GGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAGG 1351
Sbjct 1487 -------------------------------------------------------------------------- 1486
Query 1352 GTCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTG 1425
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1487 ---------------------AGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTG 1539
Query 1426 GTGCTGAAGGCCATGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGG 1499
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1540 GTGCTGAAGGCCGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGG 1613
Query 1500 GGCACAGATGC------------------TTCTCAGGCAG--------CATGAAGAAGAAATAAGTAA------ 1541
|||||||| || ||.| |||.|| |||.||..| |.|||.||||
Sbjct 1614 GGCACAGA-GCACACCTCGGTTTTACACATTGT-AGGGAGACAGGAGACATCAATCA-ACATATGTAAGATGAA 1684
Query 1542 -AGACTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATG 1614
||...||||||| |.|||.||
Sbjct 1685 CAGTGGTTCCATC--------TGCAGAGG--------------------------------------------- 1705
Query 1615 AGGAAAGAAATGGAGGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAA 1688
Sbjct 1706 -------------------------------------------------------------------------- 1705
Query 1689 CCAGCCTGACCCAGAGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAA 1762
Sbjct 1706 -------------------------------------------------------------------------- 1705
Query 1763 CTCTAAAGCATAAGTTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCT 1836
Sbjct 1706 -------------------------------------------------------------------------- 1705
Query 1837 CATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGG 1910
Sbjct 1706 -------------------------------------------------------------------------- 1705
Query 1911 AGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGA 1984
Sbjct 1706 -------------------------------------------------------------------------- 1705
Query 1985 AGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTG 2058
Sbjct 1706 -------------------------------------------------------------------------- 1705
Query 2059 GAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAA 2132
Sbjct 1706 -------------------------------------------------------------------------- 1705
Query 2133 GCAGGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGC 2206
Sbjct 1706 -------------------------------------------------------------------------- 1705
Query 2207 CCCCAGCCTCGGACGCCGTGGCCCTTGGGAGAGAGGTGGGTGACCGC 2253
Sbjct 1706 ----------------------------------------------- 1705
