Nucleotide Global Alignment
Description
- Query:
- TRCN0000468295
- Subject:
- XR_001780073.1
- Aligned Length:
- 6684
- Identities:
- 408
- Gaps:
- 6246
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCTCTCGCCGCTGGCCCGGCTCGGCGCTCGCGGAGCTTCGCAGCCGCCGGGCGGGGGGAGGAGGCGGGGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGGGACGGAGATCTGGGGCTCGGAGCCGGCCGCCGCTGCGCTCCGCTTCGCTGTGGGGCTCGGTGTGTCGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGGGGGGCGGGGGGGCTCCGCTATGGAGGCAAATGGGAGCCCAGGCACCTCGGGCAGCGCCAACGACTCCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCACGACCCCGGTAAAATGTTTATCGGTGGACTGAGCTGGCAGACCTCACCAGATAGCCTTAGAGACTATTTTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAAATTTGGAGAAATTAGAGAATGTATGGTCATGAGAGATCCCACAACGAAACGCTCCAGAGGCTTCGGTTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCACCTTCGCAGACCCAGCAAGTGTAGATAAAGTATTAGGTCAGCCCCACCATGAGTTAGATTCCAAGACGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGACCCAAAAGTTGCATTTCCTCGTCGAGCGCAACCTAAGAGTCAAGAGCAGGGAGGCTCCTGGAAACGCACAT 518
Query 1 --------------------------------------ATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGG 36
|||||||||||||||||||||||.||.|||||.||.
Sbjct 519 GGACCACGGTCCAAGCTCGGGCTGCCTCAGGTGACCAGATGGTCACAAGAACAAAGAAAATCTTCGTAGGAGGA 592
Query 37 TTATCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCT 110
||.|||||.||||||||||||||||||||||||||.|||||||||||||||||||||||.||.|||||.|||||
Sbjct 593 TTGTCTGCAAACACAGTAGTGGAAGATGTAAAGCAGTATTTCGAGCAGTTTGGCAAGGTAGAGGATGCGATGCT 666
Query 111 GATGTTTGATAAAACTACCAACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGA 184
||||||.||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||
Sbjct 667 GATGTTCGACAAAACCACCAACAGGCACAGAGGGTTTGGCTTTGTCACCTTTGAGAATGAAGACGTTGTGGAGA 740
Query 185 AAGTCTGTGAGATTCATTTCCATGAAATCAATAATAAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTC 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGTCTGTGAGATTCATTTCCATGAAATCAATAATAAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTC 814
Query 259 ATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATGGACGCGTTCATGCTTGGCATGGG 332
|||||||||||||||||||||||||||||||||||.|||||.|||||||||||.||||||||||||||||||||
Sbjct 815 ATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGGCTGCCATACACCATGGATGCGTTCATGCTTGGCATGGG 888
Query 333 GATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTATGGCTATC 406
|||||||||.||.||||||||.|||||.|||||||||.|.||||||||||||||||||||.|||||||||||.|
Sbjct 889 GATGCTGGGCTACCCCAACTTTGTGGCAACCTATGGCAGAGGCTACCCCGGATTTGCTCCTAGCTATGGCTACC 962
Query 407 AGTTCCCAG-ACTATTTGCCGGTTTCACAAGACATAATTTTTAT-CAAC------------------------- 453
||||||||| .||||| || ||| ||||..|| |||.
Sbjct 963 AGTTCCCAGCCCTATT----------AC----CAT-ATTTAAATGCAAGCTTCCCGGCGGCAGCTTATGGACCA 1021
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1022 GTGGCAGCGGCAGCTGTGGCAGCGGCTCGAGGATCAGGACCTGCACACGTCCTCTCAGACACTCTTCTGAGCAC 1095
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1096 GCTCAGCAGGAAGTCCTGAATAGCTACAGTGCTCAACCGAATTTTGGCGCGCCCGCTTCCCCGGCAGGCTCCAA 1169
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1170 CCCGGCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCC 1243
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1244 AGGACTCCGGAGTGGGGAATTACATAAGCGCGGCCAGCCCACAGCCGGGCTCCGGCTTCGGCCACGGCATAGCT 1317
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1318 GGACCTTTGATTGCAACGGCCTTTACAAATGGATACCACTGAGCAGGCGCTTCCATTGCCGTCTCACTATGAGA 1391
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1392 GCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTGTTTAGGTGACGTCCTCAGACCT 1465
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1466 GGACCCCCACCAGCCTCACTCCTCATCCCAACCAGAGGTGGCACACTTGGATTGAGGGTTGACACATCTCATCT 1539
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1540 CACCCATCGGCTACCTGCTGTAATATAAGACAACAGCTTTTAAACGTGTATATAATCCATGATTTTGGTTTGGT 1613
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1614 TCTGTTTGTTTTCCTTGGTGGTCCCCCTCTCCCTCTTCCCTTCTCCTTTTAAATCTCCCTCAATCACATTTGGT 1687
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1688 AGTGATTTTTGACTTAGTCTGGTAGTCACCCAGCTTAATATCTAGTTAAAGCTAACCATAGTATACTTGTTATA 1761
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1762 TATTAAGGAGTTTTTTTTCTTTTTTTTTGTTTTCTTTTTTCCTTTAAAGAGAATTTTTGTTTTGTTTTGATTCT 1835
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1836 GTTCTCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCATTTTTGGTACCAGTTCTGAGACTGTAAGAC 1909
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1910 TTTTCATCTGGGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACTCTAT 1983
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1984 TTTGTGTTGTAGAAGTGACATACAGTTGGCTGCTTAACAGACTCTCTAGCCGTTCATTTTTGTGACGTCTCTTT 2057
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2058 GTTAACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAG 2131
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2132 TGCTTTTTCTTTTCTTCTGTTCAAAGAGGTCATATTACAAGGTTTTTTGAAATTGTGAATTCTAAAAAACAAAA 2205
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2206 AACAAACAAAAAAATGTTGTAAATATAATTCCATTAACTACATAGAAACTATTAAGGAAGAGAGAATCAAAAAA 2279
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2280 TATTTTTGTGAGGGAGTTGATCCTGGGCAGTTAGGTACCCTGGAAGGAGGGGAGGGAACCTCGATGAAGCCAGT 2353
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2354 ACAACAACAGAAGAGCCCCCCCAGCTGCCAGGGCACCCCAGACCCCCACTCTTCACTGTTGGTGTGATAGACCT 2427
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2428 AAGAACCACATTAGCACCCTGCCAGCCTACCAGCCTCTCTGTGCACAGCTTCTAATGTTATGATCTAGCTAGAT 2501
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2502 TTTTATTTAAAATATGAAAAACTGCTTTTCCCAAGACGTTTTTTAAAAGGAAAAAAAGCTACAATTTTAATATT 2575
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2576 TGACATATTTAAAGTTTCAAAGCACACTTGTTTTGGCTTAGGGGAGGGGCAGGGTGGGGTCATTCTTTTTCAGT 2649
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2650 CTTAATTTTTAAATATCTGATCATTTTATATTGTCCGATCATTTCAGCACCTCCAAAGGGTCCTAGGATATTCT 2723
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2724 GCCTCTCTCTTCACCCTGTCCCCAGACGGGGGAACCCGTGGGTCAGGCGTGGATAAGCCTGCGAGAATACACCC 2797
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2798 TTTCTCCATTCACTTTCTATTTACAAATTAGGAAAGCAACCTTTCAGTTTATATATATATTTTTTTTCCTTTTT 2871
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2872 GATACCTCAGTGCTGCAAGTATCATCAGAGAGGCTATGGAAGAGTTTTGTGTTTTGTTTTTTGTTTTGTTTTTT 2945
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2946 TTTTTAATTTATTGTAGATGTAAACAGAATTTTAAAAATAAAATATAAACATCACTGCACTGTGACTGGTGGGG 3019
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3020 AAAACTGACAGCTTCCTGTTTGTACACATTTGACATTGGCTGTTATAATATATGGTCCTCAGTTGGGGAAGACA 3093
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3094 CTTAGAATGAAGGATGTTTTTTAATTTAACTTTTTTTTTTTTTTAAAGAAAAATATCAGTAATAGGTCGGCAAC 3167
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3168 AGCAGCCGTAGGAAGTACAACTTAGGGTAGCATTAAAGCATACTGTAGTGTGGATATATTTTTTTTCTTTTTTA 3241
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3242 AAATGTGATATTGACATTTTATTAATATTTTTTAAATTGTTACGTTTATAAATTTGGTACTTAAGGCACAGCCA 3315
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3316 GTGTGAGGCACTGAACGCGACATTTATTACAATGAGCTGCTGCACTCCTACTTTTATAAATTTTACTAACAAGT 3389
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3390 AGACTAATGTAGACATTCACAGACGGGATAGCGCAGAAGCATCTTCACACGACAAGTCTCCAAAAAAAAAAAGC 3463
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3464 TAATTCAGAGAGGGCGGGAGGAAGCCTGTTCCCGTTCTAATTAAGTGCAACCTTGTTTTATCTTATTGTTTTAT 3537
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3538 TTTTTAAGAAAGGAAATCATGTTCTTTTTTTATATCTCTATATATAAGATACAGAGTTGTTTGGTAAGGTTTGG 3611
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3612 GGTGTTTTTTGTTTTGTTTTGTTTTAAGTTTCCAAACAACCAAACTAAGAAAAATGCTGGATGCTTTTAGAATA 3685
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3686 CAAAACTTACTCAAGTCATAAAATAACAAAATAGAACTTTTACTTTAAGAAACAACAACAAAGAGAGAGAGAGA 3759
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3760 CTCGATTCCCAGCAAGTCAGTGTCTCACAAGGGCACTGGCTAATTACTCTTCTGTCCGCGTTGCTGATGTCCTG 3833
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3834 TCCCCAGCCCCTGTCCATCTCCCCCACACTCCCATCACCTCATAGAACGCTCTTTGTTGATCATTGTCTGTTAA 3907
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3908 TAATGTATAAAATGGCTATCTTGTAAGTGTGCTGTCTTGGTACTAGTGTAGTGACTTTTTTTCTCCTCTTCTAG 3981
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3982 TACATATTGATAGGTATAATGTAATTAAGGTTTTAAAAAAAATAGACATAGTTATTCAGATTAGGACCAGTAAG 4055
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4056 GATAGAACTTTCTCTTATTTATGAAAAGAAAAAAAATGCTAATAATTTGGGGGCAGTTTTTTCCTTTTTTTTTT 4129
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4130 TTTCCAAGTTCAAATTTACTTTTATTTTTGCTGATTTGATGTGGTTTCAACTAACCCAAGGTCTCACAATGTTC 4203
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4204 AAATGGCGGCTGACTCTACAGCATTCTGTAGGTCCCTGCCCCCCTAGCTGAAGGGGTGTGCCATACTACCTTAA 4277
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4278 ATGCAAACACTAGATATGCAAAACTGGATTTTTTTAATTTATTTTTTAAAAGAGGGAGGTGTGGTATATTAAAA 4351
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4352 TGATTTTACTAAGAGAAAAAAAATATTTTTTTAAGGATGCTCAGAAGAAATTGATAATCTGTGTGAATATGTTT 4425
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4426 TAGATGTTTATATACATTTTGAAGAGACCCAGTAGCCCATAGCACAAATCTTGTGAACATCTGATATGTTTTCA 4499
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4500 AGTGGCTACCTAGGATAAGGTTCATCATTAGTACCCCCACCCCCACCCCACCGCCATCTAGAAGTCCATCTTAA 4573
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4574 ACAATTTTTTGTAAATTCTTTCAGCACTGGTGTCCATCTTTGTCTTTGTTTCAGTTAAGCTCAATAGCGAATGT 4647
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4648 GGGACCCCCTCCTCTGACCTTCCCTGGGGGAGAAACCCTCTTGGCTAATGGCTCTTCCCTGGCATTATCAATAA 4721
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4722 CCACCCGGGGACTCTCTGGCTTTCAGATCCATCTGCCTGAGACCCCAAGGTCCTCTCCTCCCTAGAGGGGAGGT 4795
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4796 GGAGCAGCAGTTGACTCCTGGTTCCCTCCCTATTTCAGCCTGGATGTGGGGCTGGTGGAGATGCCTCCACCCCA 4869
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4870 GGAGCCTCTGCATATGTGGTTCGTGGCCTTCTTCTCACCCATTGGGAAAACCAAACAGCCTCACACTCTGTCCC 4943
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4944 CATCGCTCATTGGCTTAACTCAAGTGAGACCCCAACTGGGCCTTTGCGTTTTGTTTTTGTTTTTTTTTAAATCC 5017
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5018 TTCATGACCATTCTCTTAATTTGAACTCGTAGCTTGGGCTTTAAGGTAGCATGGCTCGATTGCTGTCGACTTAA 5091
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5092 TGTTCCACTGCACAGCAATTCACGGCCAGTGAATGTTACACACATCTTGCTAGACTAGTATAAAAATCATTGGG 5165
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5166 TAATTGTTGGTTCTAATGACCTGAAAGGTGTTCAGTTTGTGGGTTTTTTTTGGGGGGGGCTGCTTGGGGGGTTG 5239
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5240 TTTTTCCTTCTTTGTTTTTTTTTAATTTGAGAATTTAGGGGGATAATTTTTGGGGGGGGGTTCCAAATAAAAAA 5313
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5314 ATAGAAAGCTATTTTGATCTTTAGTGCAAACTAGGGACGTAGCCTCCATCACCACAACCACACCGCTTCGCTCT 5387
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5388 GCCATCCACCCACCGCAGCAGCATCTTCAAGAATAAAGCAATATAGTTTACTACATTTTTTTTTAAAATTGAAG 5461
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5462 GTCAGCCATGCTTTCTGTATTATATTGCATATGAAATTGTTTACAAAAGAAACACTAACTCATCCTTCTCTTTA 5535
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5536 TCAGTTGAAAGTGACACACGGGACAGAGGGAAATTGGAGGGCAGGTGAGGGAGGGGAGAGGGTTTTTTTGTATT 5609
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5610 TTGGTTTGTTTGGTTTTGGTTTCTTTTCTTGAATGTGCTTTAGTAGCCAGATCCTCCAAGGAAGGCAAAAGCCA 5683
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5684 GCCAGCCAGAGAGAGAGTAGCGAAGCGGGCAGGCTGCAGGTAAGCACACTGAACAAGAGACACACTGGCAAGCT 5757
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5758 CCCCCACCTCAGCGAGAGCAGAAAGCGAACAGCTCAGCCCAGTCCTGGGCACAGACACTACACAAGGCAATGCT 5831
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5832 GGAATTGAAACAATACTTTAATACCGTTTAAGTTTGTTTCCTTTTTTTTTTTCCTCTTTTTTTTTTCTTTCACC 5905
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5906 AAGAAAAGAAAAAAGTAAACTAAAATACAAAATACAAAAACAAACAAACAAACAACAACCCATATAAATAAAAC 5979
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5980 CCACCCCTCTCTGGGAAACAACCATAATTCAAACATGGCTATTTAGTAATCAGAAGGTATTGTCTCAGACAGGA 6053
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6054 TTTCATTTCCGGGAGGCAGGGCGTGAGGGGGGAGGGGAGTGGGACTGAGAGACAGTTCCAGAGCCTCCAGGGAA 6127
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6128 GGCTTCTACTGCTAACTGCTGTATTCTGTATATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAG 6201
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6202 TAGCGTGGGCTAGCCAATCTGCCATTCATGGTGTTATAAACTCGGAATTCCATATGTAATAGGATGCAAGTCTA 6275
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6276 AGCGTTTCATGTGGACATAAATGTATCTAAATAAAACTTCCCCTAGCACTGTGGCTGACCTCACCCTTACTTTT 6349
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6350 ATACTTTAGTATGAAACTGATGAGAACTTTGGTAGTGAGTATTTTTTTTATATATATACATATATATGTATCTA 6423
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6424 TATATATATATATATCTCAAGCATCTTTCAGGTCTTTGTGTGTGGCTTTCTTAAAGCCCTGTTGTAAAAAAAAA 6497
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6498 AAAAATTACTAAGTGGATGGCAGTCTCTCACATCACAGATGTGGAAAGTATAATTTTATATTTGTATTTTCAAA 6571
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6572 TAAATAAGTTTGTGAAAGGTTTCCATCCTCTACTGTGGTCCAGAAATCAATGTGTTTGTCTGACAAAAAAAATA 6645
Query 454 ------------------------ 453
Sbjct 6646 ATAAAATAAACTGTTTTGAACAGA 6669
