Nucleotide Global Alignment
Description
- Query:
- TRCN0000468295
- Subject:
- XR_879764.1
- Aligned Length:
- 6606
- Identities:
- 405
- Gaps:
- 6168
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCTCTCGCCGCTGGCCCGGCTCGGCGCTCGCGGAGCTTCGCAGCCGCCGGGCGGGGGGAGGAGGCGGGGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGGGACGGAGATCTGGGGCTCGGAGCCGGCCGCCGCTGCGCTCCGCTTCGCTGTGGGGCTCGGTGTGTCGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGGGGGGCGGGGGGGCTCCGCTATGGAGGCAAATGGGAGCCCAGGCACCTCGGGCAGCGCCAACGACTCCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCACGACCCCGGTAAAATGTTTATCGGTGGACTGAGCTGGCAGACCTCACCAGATAGCCTTAGAGACTATTTTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAAATTTGGAGAAATTAGAGAATGTATGGTCATGAGAGATCCCACAACGAAACGCTCCAGAGGCTTCGGTTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCACCTTCGCAGACCCAGCAAGTGTAGATAAAGTATTAGGTCAGCCCCACCATGAGTTAGATTCCAAGACGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGACCCAAAAGTTGCATTTCCTCGTCGAGCGCAACCTAAGAGTCAAGAGCAGGGAGGCTCCTGGAAACGCACAT 518
Query 1 --------------------------------------ATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGG 36
|||||||||||||||||||||||.||.|||||.||.
Sbjct 519 GGACCACGGTCCAAGCTCGGGCTGCCTCAGGTGACCAGATGGTCACAAGAACAAAGAAAATCTTCGTAGGAGGA 592
Query 37 TTATCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCT 110
||.|||||.||||||||||||||||||||||||||.|||||||||||||||||||||||.||.|||||.|||||
Sbjct 593 TTGTCTGCAAACACAGTAGTGGAAGATGTAAAGCAGTATTTCGAGCAGTTTGGCAAGGTAGAGGATGCGATGCT 666
Query 111 GATGTTTGATAAAACTACCAACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGA 184
||||||.||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||
Sbjct 667 GATGTTCGACAAAACCACCAACAGGCACAGAGGGTTTGGCTTTGTCACCTTTGAGAATGAAGACGTTGTGGAGA 740
Query 185 AAGTCTGTGAGATTCATTTCCATGAAATCAATAATAAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTC 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGTCTGTGAGATTCATTTCCATGAAATCAATAATAAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTC 814
Query 259 ATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATGGACGCGTTCATGCTTGGCATGGG 332
|||||||||||||||||||||||||||||||||||.|||||.|||||||||||.||||||||||||||||||||
Sbjct 815 ATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGGCTGCCATACACCATGGATGCGTTCATGCTTGGCATGGG 888
Query 333 GATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTATGGCTATC 406
|||||||||.||.||||||||.|||||.|||||||||.|.||||||||||||||||||||.|||||||||||.|
Sbjct 889 GATGCTGGGCTACCCCAACTTTGTGGCAACCTATGGCAGAGGCTACCCCGGATTTGCTCCTAGCTATGGCTACC 962
Query 407 AGTTCCCAGACTATTTGCCGGTTTCA-CAAGACATAATTTTTATCAAC-------------------------- 453
|||||||||.| ||.||||...|| | ||||..||
Sbjct 963 AGTTCCCAGGC---TTCCCGGCGGCAGC------------TTATGGACCAGTGGCAGCGGCAGCTGTGGCAGCG 1021
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1022 GCTCGAGGATCAGGACCTGCACACGTCCTCTCAGACACTCTTCTGAGCACGCTCAGCAGGAAGGCTCCAACCCG 1095
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1096 GCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGA 1169
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1170 CTCCGGAGTGGGGAATTACATAAGCGCGGCCAGCCCACAGCCGGGCTCCGGCTTCGGCCACGGCATAGCTGGAC 1243
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1244 CTTTGATTGCAACGGCCTTTACAAATGGATACCACTGAGCAGGCGCTTCCATTGCCGTCTCACTATGAGAGCAT 1317
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1318 ACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTGTTTAGGTGACGTCCTCAGACCTGGAC 1391
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1392 CCCCACCAGCCTCACTCCTCATCCCAACCAGAGGTGGCACACTTGGATTGAGGGTTGACACATCTCATCTCACC 1465
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1466 CATCGGCTACCTGCTGTAATATAAGACAACAGCTTTTAAACGTGTATATAATCCATGATTTTGGTTTGGTTCTG 1539
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1540 TTTGTTTTCCTTGGTGGTCCCCCTCTCCCTCTTCCCTTCTCCTTTTAAATCTCCCTCAATCACATTTGGTAGTG 1613
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1614 ATTTTTGACTTAGTCTGGTAGTCACCCAGCTTAATATCTAGTTAAAGCTAACCATAGTATACTTGTTATATATT 1687
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1688 AAGGAGTTTTTTTTCTTTTTTTTTGTTTTCTTTTTTCCTTTAAAGAGAATTTTTGTTTTGTTTTGATTCTGTTC 1761
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1762 TCGCTTTTAAAGGATGCTGAGATGGTGATGTTACTCTCCATTTTTGGTACCAGTTCTGAGACTGTAAGACTTTT 1835
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1836 CATCTGGGACTTTAGCACACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACTCTATTTTG 1909
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1910 TGTTGTAGAAGTGACATACAGTTGGCTGCTTAACAGACTCTCTAGCCGTTCATTTTTGTGACGTCTCTTTGTTA 1983
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1984 ACCTAAGTATATCTATTTTCGGCAATAAGGTAAGGACGGCCGTGTTTTGAGGGTCTTCCTTTCCTATGAGTGCT 2057
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2058 TTTTCTTTTCTTCTGTTCAAAGAGGTCATATTACAAGGTTTTTTGAAATTGTGAATTCTAAAAAACAAAAAACA 2131
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2132 AACAAAAAAATGTTGTAAATATAATTCCATTAACTACATAGAAACTATTAAGGAAGAGAGAATCAAAAAATATT 2205
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2206 TTTGTGAGGGAGTTGATCCTGGGCAGTTAGGTACCCTGGAAGGAGGGGAGGGAACCTCGATGAAGCCAGTACAA 2279
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2280 CAACAGAAGAGCCCCCCCAGCTGCCAGGGCACCCCAGACCCCCACTCTTCACTGTTGGTGTGATAGACCTAAGA 2353
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2354 ACCACATTAGCACCCTGCCAGCCTACCAGCCTCTCTGTGCACAGCTTCTAATGTTATGATCTAGCTAGATTTTT 2427
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2428 ATTTAAAATATGAAAAACTGCTTTTCCCAAGACGTTTTTTAAAAGGAAAAAAAGCTACAATTTTAATATTTGAC 2501
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2502 ATATTTAAAGTTTCAAAGCACACTTGTTTTGGCTTAGGGGAGGGGCAGGGTGGGGTCATTCTTTTTCAGTCTTA 2575
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2576 ATTTTTAAATATCTGATCATTTTATATTGTCCGATCATTTCAGCACCTCCAAAGGGTCCTAGGATATTCTGCCT 2649
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2650 CTCTCTTCACCCTGTCCCCAGACGGGGGAACCCGTGGGTCAGGCGTGGATAAGCCTGCGAGAATACACCCTTTC 2723
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2724 TCCATTCACTTTCTATTTACAAATTAGGAAAGCAACCTTTCAGTTTATATATATATTTTTTTTCCTTTTTGATA 2797
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2798 CCTCAGTGCTGCAAGTATCATCAGAGAGGCTATGGAAGAGTTTTGTGTTTTGTTTTTTGTTTTGTTTTTTTTTT 2871
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2872 TAATTTATTGTAGATGTAAACAGAATTTTAAAAATAAAATATAAACATCACTGCACTGTGACTGGTGGGGAAAA 2945
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2946 CTGACAGCTTCCTGTTTGTACACATTTGACATTGGCTGTTATAATATATGGTCCTCAGTTGGGGAAGACACTTA 3019
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3020 GAATGAAGGATGTTTTTTAATTTAACTTTTTTTTTTTTTTAAAGAAAAATATCAGTAATAGGTCGGCAACAGCA 3093
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3094 GCCGTAGGAAGTACAACTTAGGGTAGCATTAAAGCATACTGTAGTGTGGATATATTTTTTTTCTTTTTTAAAAT 3167
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3168 GTGATATTGACATTTTATTAATATTTTTTAAATTGTTACGTTTATAAATTTGGTACTTAAGGCACAGCCAGTGT 3241
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3242 GAGGCACTGAACGCGACATTTATTACAATGAGCTGCTGCACTCCTACTTTTATAAATTTTACTAACAAGTAGAC 3315
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3316 TAATGTAGACATTCACAGACGGGATAGCGCAGAAGCATCTTCACACGACAAGTCTCCAAAAAAAAAAAGCTAAT 3389
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3390 TCAGAGAGGGCGGGAGGAAGCCTGTTCCCGTTCTAATTAAGTGCAACCTTGTTTTATCTTATTGTTTTATTTTT 3463
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3464 TAAGAAAGGAAATCATGTTCTTTTTTTATATCTCTATATATAAGATACAGAGTTGTTTGGTAAGGTTTGGGGTG 3537
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3538 TTTTTTGTTTTGTTTTGTTTTAAGTTTCCAAACAACCAAACTAAGAAAAATGCTGGATGCTTTTAGAATACAAA 3611
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3612 ACTTACTCAAGTCATAAAATAACAAAATAGAACTTTTACTTTAAGAAACAACAACAAAGAGAGAGAGAGACTCG 3685
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3686 ATTCCCAGCAAGTCAGTGTCTCACAAGGGCACTGGCTAATTACTCTTCTGTCCGCGTTGCTGATGTCCTGTCCC 3759
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3760 CAGCCCCTGTCCATCTCCCCCACACTCCCATCACCTCATAGAACGCTCTTTGTTGATCATTGTCTGTTAATAAT 3833
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3834 GTATAAAATGGCTATCTTGTAAGTGTGCTGTCTTGGTACTAGTGTAGTGACTTTTTTTCTCCTCTTCTAGTACA 3907
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3908 TATTGATAGGTATAATGTAATTAAGGTTTTAAAAAAAATAGACATAGTTATTCAGATTAGGACCAGTAAGGATA 3981
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3982 GAACTTTCTCTTATTTATGAAAAGAAAAAAAATGCTAATAATTTGGGGGCAGTTTTTTCCTTTTTTTTTTTTTC 4055
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4056 CAAGTTCAAATTTACTTTTATTTTTGCTGATTTGATGTGGTTTCAACTAACCCAAGGTCTCACAATGTTCAAAT 4129
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4130 GGCGGCTGACTCTACAGCATTCTGTAGGTCCCTGCCCCCCTAGCTGAAGGGGTGTGCCATACTACCTTAAATGC 4203
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4204 AAACACTAGATATGCAAAACTGGATTTTTTTAATTTATTTTTTAAAAGAGGGAGGTGTGGTATATTAAAATGAT 4277
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4278 TTTACTAAGAGAAAAAAAATATTTTTTTAAGGATGCTCAGAAGAAATTGATAATCTGTGTGAATATGTTTTAGA 4351
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4352 TGTTTATATACATTTTGAAGAGACCCAGTAGCCCATAGCACAAATCTTGTGAACATCTGATATGTTTTCAAGTG 4425
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4426 GCTACCTAGGATAAGGTTCATCATTAGTACCCCCACCCCCACCCCACCGCCATCTAGAAGTCCATCTTAAACAA 4499
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4500 TTTTTTGTAAATTCTTTCAGCACTGGTGTCCATCTTTGTCTTTGTTTCAGTTAAGCTCAATAGCGAATGTGGGA 4573
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4574 CCCCCTCCTCTGACCTTCCCTGGGGGAGAAACCCTCTTGGCTAATGGCTCTTCCCTGGCATTATCAATAACCAC 4647
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4648 CCGGGGACTCTCTGGCTTTCAGATCCATCTGCCTGAGACCCCAAGGTCCTCTCCTCCCTAGAGGGGAGGTGGAG 4721
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4722 CAGCAGTTGACTCCTGGTTCCCTCCCTATTTCAGCCTGGATGTGGGGCTGGTGGAGATGCCTCCACCCCAGGAG 4795
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4796 CCTCTGCATATGTGGTTCGTGGCCTTCTTCTCACCCATTGGGAAAACCAAACAGCCTCACACTCTGTCCCCATC 4869
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4870 GCTCATTGGCTTAACTCAAGTGAGACCCCAACTGGGCCTTTGCGTTTTGTTTTTGTTTTTTTTTAAATCCTTCA 4943
Query 454 -------------------------------------------------------------------------- 453
Sbjct 4944 TGACCATTCTCTTAATTTGAACTCGTAGCTTGGGCTTTAAGGTAGCATGGCTCGATTGCTGTCGACTTAATGTT 5017
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5018 CCACTGCACAGCAATTCACGGCCAGTGAATGTTACACACATCTTGCTAGACTAGTATAAAAATCATTGGGTAAT 5091
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5092 TGTTGGTTCTAATGACCTGAAAGGTGTTCAGTTTGTGGGTTTTTTTTGGGGGGGGCTGCTTGGGGGGTTGTTTT 5165
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5166 TCCTTCTTTGTTTTTTTTTAATTTGAGAATTTAGGGGGATAATTTTTGGGGGGGGGTTCCAAATAAAAAAATAG 5239
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5240 AAAGCTATTTTGATCTTTAGTGCAAACTAGGGACGTAGCCTCCATCACCACAACCACACCGCTTCGCTCTGCCA 5313
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5314 TCCACCCACCGCAGCAGCATCTTCAAGAATAAAGCAATATAGTTTACTACATTTTTTTTTAAAATTGAAGGTCA 5387
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5388 GCCATGCTTTCTGTATTATATTGCATATGAAATTGTTTACAAAAGAAACACTAACTCATCCTTCTCTTTATCAG 5461
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5462 TTGAAAGTGACACACGGGACAGAGGGAAATTGGAGGGCAGGTGAGGGAGGGGAGAGGGTTTTTTTGTATTTTGG 5535
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5536 TTTGTTTGGTTTTGGTTTCTTTTCTTGAATGTGCTTTAGTAGCCAGATCCTCCAAGGAAGGCAAAAGCCAGCCA 5609
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5610 GCCAGAGAGAGAGTAGCGAAGCGGGCAGGCTGCAGGTAAGCACACTGAACAAGAGACACACTGGCAAGCTCCCC 5683
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5684 CACCTCAGCGAGAGCAGAAAGCGAACAGCTCAGCCCAGTCCTGGGCACAGACACTACACAAGGCAATGCTGGAA 5757
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5758 TTGAAACAATACTTTAATACCGTTTAAGTTTGTTTCCTTTTTTTTTTTCCTCTTTTTTTTTTCTTTCACCAAGA 5831
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5832 AAAGAAAAAAGTAAACTAAAATACAAAATACAAAAACAAACAAACAAACAACAACCCATATAAATAAAACCCAC 5905
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5906 CCCTCTCTGGGAAACAACCATAATTCAAACATGGCTATTTAGTAATCAGAAGGTATTGTCTCAGACAGGATTTC 5979
Query 454 -------------------------------------------------------------------------- 453
Sbjct 5980 ATTTCCGGGAGGCAGGGCGTGAGGGGGGAGGGGAGTGGGACTGAGAGACAGTTCCAGAGCCTCCAGGGAAGGCT 6053
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6054 TCTACTGCTAACTGCTGTATTCTGTATATACTGTGCCACCCTGTGTGGAGTCTGTGAGTGTGCTCTTGAGTAGC 6127
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6128 GTGGGCTAGCCAATCTGCCATTCATGGTGTTATAAACTCGGAATTCCATATGTAATAGGATGCAAGTCTAAGCG 6201
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6202 TTTCATGTGGACATAAATGTATCTAAATAAAACTTCCCCTAGCACTGTGGCTGACCTCACCCTTACTTTTATAC 6275
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6276 TTTAGTATGAAACTGATGAGAACTTTGGTAGTGAGTATTTTTTTTATATATATACATATATATGTATCTATATA 6349
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6350 TATATATATATCTCAAGCATCTTTCAGGTCTTTGTGTGTGGCTTTCTTAAAGCCCTGTTGTAAAAAAAAAAAAA 6423
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6424 ATTACTAAGTGGATGGCAGTCTCTCACATCACAGATGTGGAAAGTATAATTTTATATTTGTATTTTCAAATAAA 6497
Query 454 -------------------------------------------------------------------------- 453
Sbjct 6498 TAAGTTTGTGAAAGGTTTCCATCCTCTACTGTGGTCCAGAAATCAATGTGTTTGTCTGACAAAAAAAATAATAA 6571
Query 454 -------------------- 453
Sbjct 6572 AATAAACTGTTTTGAACAGA 6591
