Nucleotide Global Alignment

Description

• Query: TRCN0000468359
• Subject: XM_017003771.1
• Aligned Length: 1097
• Identities: 371
• Gaps: 700

Alignment

Query    1  ATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAAATGCCCGCGTCCTCCGGGGGATTCT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAAATGCCCGCGTCCTCCGGGGGATTCT  74

Query   75  CGCAGGAGCCACAGCTAACAAGGCTTCTCATAACAGGACCCGGGCCCTGCAAAGCCACAGCTCCCCAGAGGGCA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGCAGGAGCCACAGCTAACAAGGCTTCTCATAACAGGACCCGGGCCCTGCAAAGCCACAGCTCCCCAGAGGGCA  148

Query  149  AGGAGGAACCTGAACCCCTATCCCCGGAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGAGGAACCTGAACCCCTATCCCCGGAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCT  222

Query  223  GTGGGACTGGCCTGG----GCC----------------------------------------------------  240
            |||||||||||||||    |||                                                    
Sbjct  223  GTGGGACTGGCCTGGTACAGCCTGTACACCCGCACCTGGCTCGGGTACCTCTTCTACCGACAGCAGCTGCGCAG  296

Query  241  --------ATCG------------------------------------------------------GCTTCCCT  252
                    ||||                                                      ||||||| 
Sbjct  297  GGCTCGGAATCGCTACCCTAAAGGCCACTCGAAAACCCAGCCCCGCCTCTTCAATGGAGTGAAGGTGCTTCCC-  369

Query  253  TGTGGTATCC---TCCTCT---------------------TCATCCTCACCAAG--------------------  282
                  ||||   ||||||                     |||||..||||.||                    
Sbjct  370  ------ATCCCTGTCCTCTCGGACAACTACAGCTACCTCATCATCGACACCCAGGCCCAGCTGGCTGTGGCTGT  437

Query  283  ----------------CGGGAAGTG------------GACAAGGA----------------------CCGTGT-  305
                            ||||..|||            ||.|||||                      |.|||| 
Sbjct  438  GGACCCTTCAGACCCTCGGGCTGTGCAGGCTTCCATTGAAAAGGAAGGGGTCACCTTGGTCGCCATTCTGTGTA  511

Query  306  ----GAAGCA----GA------TGAAGG----------CT----CGGCAGAACATGCGG--TTGTCCAACACGG  349
                .|||||    ||      ||.|||          ||    ||||.|.||   |||  .||||        
Sbjct  512  CTCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCGGCAC---CGGGACTGTC--------  574

Query  350  GCGAGTATGAGAGCCAGAGGTTCAG---GGCTT--CCTCCCAGAGTGCCCCGTCCCCT----------GATGTT  408
            |.|.|||.|.|||||     .||||   |||.|  |||.||    |..|||.||||||          ||||| 
Sbjct  575  GGGTGTACGGGAGCC-----CTCAGGACGGCATCCCCTACC----TCACCCATCCCCTGTGTCATCAAGATGT-  638

Query  409  GGGTCTG--------GGGTGCAGACC------------------------------------------------  426
             ||||.|        ||.|.||||.|                                                
Sbjct  639  -GGTCAGCGTGGGACGGCTTCAGATCCGGGCCCTGGCTACACCTGGCCACACACAAGGCCATCTGGTCTACCTA  711

Query  427  --------------------------------------------------------------------------  426
                                                                                      
Sbjct  712  CTGGATGGGGAGCCCTACAAGGGTCCCTCCTGCCTCTTCTCAGGGGACCTGCTCTTCCTCTCTGGCTGTGGTCA  785

Query  427  --------------------------------------------------------------------------  426
                                                                                      
Sbjct  786  TGAGTATGCAGAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCCGAGAACCTGGCCCGGGAGAGGAAGATGC  859

Query  427  --------------------------------------------------------------------------  426
                                                                                      
Sbjct  860  AGTGGGTGCAGCGGCAGCGGCTGGAGCGCAAGGGCACGTGCCCATCTACCCTGGGAGAGGAGCGCTCCTACAAC  933

Query  427  --------------------------------------------------------------------------  426
                                                                                      
Sbjct  934  CCGTTCCTGAGAACCCACTGCCTGGCGCTACAGGAGGCTCTGGGGCCGGGGCCGGGCCCCACTGGGGATGATGA  1007

Query  427  -------------------------------------------------------------  426
                                                                         
Sbjct 1008  CTACTCCCGGGCCCAGCTCCTGGAAGAGCTCCGCCGGCTGAAGGATATGCACAAGAGCAAG  1068