Nucleotide Global Alignment
Description
- Query:
- TRCN0000468435
- Subject:
- XR_001755169.2
- Aligned Length:
- 2653
- Identities:
- 861
- Gaps:
- 1692
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAGTGGCAGGAACTTGGCTCACTGCAACCTCCGCTTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGTAGCTGGGATTACAGGCGCACGTCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGGCGTGAGCCACCGTGCCCGGCCGGGAGGTCACTTTAAGGAGGGCTGTCCAACTGCAAGGAGCCGCAAGCA 296
Query 1 ------------------------------------------------------------------ATGAAGCC 8
|||||.||
Sbjct 297 GGAAGTGAAACCACAGCACTTCAAAAAAAGAGGGAGACTGGGACAAGCGTATCTAAGAGGCTGAACATGAATCC 370
Query 9 TCACTTCAGAAACACAGTGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACCCATCCTTT 82
.||..|||||||..|..|||||||.|||||||||||||||||||.|.||||||||.|.||...|||||||||.|
Sbjct 371 ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT 444
Query 83 CTCGTCGGA-ATACCGTCTGGCTGTGCTACGAAGTGAAAACAAA---GGGTCCCTCAAGGCCCCGTTTGGACGC 152
.|.|||||| .|||..| |||||||||||.||||||||||.||| |||.|.|||||..|.||.||.||||.|
Sbjct 445 ATGGTCGGAGCTACACT-TGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACAC 517
Query 153 AAAGATCTTTCGAGGCC------------------------------------AGGTGTATTCCCAGCCTGAGC 190
|..|.|||||||||||| |||||||||.||.|..||||.
Sbjct 518 AGGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGA 591
Query 191 ACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCAGATCACC 264
||||||||||||||||||||.|.|||||||||||||||||||..|||||||||.|||.|.|.||||||||||||
Sbjct 592 ACCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACC 665
Query 265 TGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCTGTCTGAGCACCCCAATGT 338
|||||||||||.||||.||||||||.|..||||||||.||||.||.||.|||||.||.||||||||||||||||
Sbjct 666 TGGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGT 739
Query 339 CACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGCAGGCTGA 412
|||||||||||||||.|||||||||||||||||||||.||||.|||||||..||..|||.||||..|||||||.
Sbjct 740 CACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTCAGGCTGC 813
Query 413 GTCAGGCAGGGGCCCGTGTGAAGATTATGGACGATGA------------------------------------- 449
.|.||||||||||||||||||||||.||||||.||||
Sbjct 814 ATAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGGTGAGAGGTGCAGGGGTCAGGGGAGCATGACGGGG 887
Query 450 -------------------------------------------------------------------------- 449
Sbjct 888 AGGAACAGCCTCAGAGATGGATGGATCTGCAATGCCATGGCTGGGGGTGTTCCAGGGCAGCCTGCAGGGGTGGG 961
Query 450 -------------------------------------------------------------------------- 449
Sbjct 962 GCTGGCACTGATTGCAACTGACAGCCAGGAGACCAGGCCTGGGAGGGCAGGCCCAGGGTCAGGGGAGAGCCTGA 1035
Query 450 ----------------------AGAATTTGCATACTGCTGGGAAAACTTTGTGTACAGTGAAGGTCAGCCATTC 501
|||.||||||||||||||||||||||||||||.||.||||||||||||||||
Sbjct 1036 GTGCTTCCCACCTCTTCATCTCAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAATGAAGGTCAGCCATTC 1109
Query 502 ATGCCTTGGTACAAATTCGATGACAATTATGCATTCCTGCACCGCACGCTAAAGGAGATTCTCAGAAACCCGAT 575
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1110 ATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGATTCT------------ 1171
Query 576 GGAGGCAATGTATCCACACATATTCTACTTCCACTTTAAAAACCTACGCAAAGCCTATGGTCGGAACGAAAGCT 649
Sbjct 1172 -------------------------------------------------------------------------- 1171
Query 650 GGCTGTGCTTCACCATGGAAGTTGTAAAGCACCACTCACCTATCTCCTGGAAGAGGGGCGTCTTCCGAAACCAG 723
|||
Sbjct 1172 -----------------------------------------------------------------------CAG 1174
Query 724 GTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGACATACTGTCTCCTAA 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1175 GTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGACATACTGTCTCCTAA 1248
Query 798 CACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGGAGGTGGCCGAGTTCC 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249 CACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGGAGGTGGCCGAGTTCC 1322
Query 872 TGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTACTACTTCTGGGATACAGATTACCAG 945
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1323 TGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTACTTCTGGGATACAGATTACCAG 1396
Query 946 GAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGCCTCCGTGGAGATCATGGGCTACAAAGATTTTAAATATTGTTG 1019
|||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||..||.||||||
Sbjct 1397 GAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCTACAAAGATTTTGTATCTTGTTG 1470
Query 1020 GGAAAACTTTGTGTACAATGATGATGAGCCATTCAAGCCTTGGAAAGGACTAAAATACAACTTTCTATTCCTGG 1093
|.|||||||||||||||.|||||||||||||||||||||||||||.||||||.||..||||||||.|.|.|||.
Sbjct 1471 GAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTACAAACCAACTTTCGACTTCTGA 1544
Query 1094 ACAGCAAGCTGCAGGAGATTCTCGAG------------------------------------------------ 1119
|.||.|.|||.|.||||||||||.||
Sbjct 1545 AAAGAAGGCTACGGGAGATTCTCCAGTGAGGGGTCTCCCTGGGCCTCATGGTCTGTCTCTTCTAGCCTCCTGCT 1618
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1619 CATGCTGCACGGGCCTCCCCTCCATCCTGCACCAGCTGTGCTTTTGCCTGGTCATCCTGAGCCCCTCCTGGCCT 1692
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1693 CAGGGCCATTCCATAGTGCCCCCCTGCCTCACCACCTCCTCCCCGCTCTCCCAGGCTCTTCTTGTAGAGGCTCT 1766
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1767 CCATCCACCTCCCCAGTCCTGTTCCCCCAGCCTGGGTGCCCCTAACTTGACTCTTCCCATCTCCCCAGCATAAC 1840
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1841 CAAATCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTGTCGCCCAGACTAGAGTGCAATGGCTGG 1914
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1915 ATCTCAGCTCACTGCAAACTCTGCTTACTGGGTTCAAGTGATTCTCCTGTCTCAGCTTCTGAGTAGCTGGGATT 1988
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1989 ACAGATGCCTGCCACCACGCCCAGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTTAGTAGTGACTG 2062
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2063 GGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCATCTCTGTCTCCCAAAGT 2136
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2137 GCTGGGATTACGGGCGTGAGCCACCCGGCTCGGCCGCACAACCAAATCTTATTAAACTCAATCTAGTCTGGCCC 2210
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2211 TGGTGACTCACGCCTTTCGGAGGCAGAGGTGGGAGAATCGCTTGAGCCCAGAAGTTTGAGACCAGCCTGGGCCA 2284
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2285 CACGACAAAGCCCCATTTCTACAAAAAAAAATACCAAAAAAAAGCCAGATGTGGTGGCATGCACCTGTAGTTTA 2358
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2359 AGCTACTTGGGAGGATGAAGTGGGAGGACTGCTTGAGCCGGGGAGGTGGAGGCTGGAGTAAACTGAGATCGCGC 2432
Query 1120 --------------------------------------------------------------- 1119
Sbjct 2433 CACAGAACTCCAGTTTGAGCAACAGATCAAGACCCTGCCTGAAAATAAATCAATAAATACACT 2495
