Nucleotide Global Alignment
Description
- Query:
- TRCN0000468959
- Subject:
- NR_135755.2
- Aligned Length:
- 6163
- Identities:
- 247
- Gaps:
- 5888
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGGTGAGTAGAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGCCTCGTCGGGTGATTCAAGTGGCGAGGCTCTCTGACCCGGCCCCCCGGCGGGGACGCCCCAGACGTGGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCAAAGCGTCCGGGTCGCGGCGAGTGGGACAGCGGAGCCGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCTCCCACTCTGCGGCCCGCGGCCCCTGGGACCCGAGAACCCTGATACCGGGTCCGTGAAATCCCTGCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGCTCGCTGCTTCCCAACTGTAACGATCTCAGTGGCTGGCTAACTCGGGCGAAACGGCGTGTGTTTTGCCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACTCTGCCAGTGTTTGTTACCACAGCTGAGAAAATAGCCTTTTACAAATGCTTTTAATATGTAGCTTATAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCTAATCTCCAGCGTTAGGAAATTGGAATGCGTATTCTACTAAATTGAGTACGGGGAGAAATGGACCAATTT 518
Query 1 ----------------------------------------------ATGGCGTCCGAACTTTGTAAGACGATCT 28
||||||||||||||||||||||||||||
Sbjct 519 TGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATCT 592
Query 29 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 666
Query 103 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTG-------- 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGATACCTGC 740
Query 169 --CCAGAAAACCTTGCT-------CAGAAG-----------CTTCCAAACCT------TGTGGAACTGA-AGAC 215
.||.|.|||.|.|.| |.|||| |||..|||.|| |.||||.||.| .|||
Sbjct 741 ACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGAC 814
Query 216 AACTG--TTAG---TTTTGTG----------------------GCTT--------------------------- 235
|| || |||| ||.|.|| ||||
Sbjct 815 AA-TGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACC 887
Query 236 -ACTGC---TGCTCCACCCAGTGTCTGCAGACTTTTGACC-----------TGCTGAGT--------------- 279
||||| |.||.|..|||||..|| .|||.|.|||| ||.|..||
Sbjct 888 AACTGCAATTCCTACCTCCAGTACCT---CACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTG 958
Query 280 -------------------------------------------------------------------------- 279
Sbjct 959 CCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGAT 1032
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1033 CTCGAGAACTACAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAA 1106
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1107 GTCATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCA 1180
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1181 GCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAAT 1254
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1255 TGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTA 1328
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1329 CCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCAT 1402
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1403 CGTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTT 1476
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1477 TTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTC 1550
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1551 AGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCG 1624
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1625 GGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGT 1698
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1699 TGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTT 1772
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1773 ACAGAAACCATTTAGATTGATGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGA 1846
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1847 CTTGATCATCTAGCCAGATTCCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTG 1920
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1921 CTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAG 1994
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1995 GAGTTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAG 2068
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2069 GCTCCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTA 2142
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2143 CAGTGTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTTT 2216
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2217 TTTAAAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAGA 2290
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2291 ATTTGAGGAATATTTGAAGCTTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGAA 2364
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2365 AGGGGGAGAAAACACACATTGAAATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATACTGA 2438
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2439 CTTTGAAATATTTTTGTCACATGTGAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAGA 2512
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2513 CGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGG 2586
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2587 TTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTT 2660
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2661 TTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGC 2734
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2735 ACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACAG 2808
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2809 GATGATTCAAAGTACAGCCCGTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTCG 2882
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2883 TTTCTTGTATACTTAGCTTACTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTC 2956
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2957 GACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGT 3030
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3031 CACGTATTTGCTCTTCCTTTCAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGT 3104
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3105 GAAGTGATTCTTTTTTTAAAATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAAG 3178
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3179 AATTTGCTTGGTAGAAAAATTATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATTA 3252
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3253 GCTGCCCTGACTTTATAATGCTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGATC 3326
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3327 TTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGT 3400
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3401 GTGTTCCCACTGTATCTGCACTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAACA 3474
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3475 TTTCAAAGGCTTATAGTAAAATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAATT 3548
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3549 GAAGTTTAACATAACCTCTACATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCTT 3622
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3623 CAGGCCTAAGTGACTGCTACCTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCTA 3696
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3697 CAATCATATGTCATGGAATGGAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGAT 3770
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3771 ACATTAGTTTTACCTTGTTTGAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGAA 3844
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3845 CTACGGTGTGTTAAACAACAGCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTAC 3918
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3919 AGCACCTGAACTTAATTGATGAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTATG 3992
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3993 CTGGATTTATCGATGTCATTCTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTAC 4066
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4067 ATGCTATATATTTGAATTGTGTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCTT 4140
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4141 GAGCAACAGTTACACTAGGTAGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAAG 4214
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4215 TATCATCTCTGTTCAGGTAAGTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATA 4288
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4289 GCCTCATGAGCATAGGCCTTCCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTTC 4362
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4363 TTCAGTATGTCCAATTGTTATCATACCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTTC 4436
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4437 AGTTAATACATGTTTTGAGCACATTCTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGCT 4510
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4511 TGGGTGGAGGATCCACTCTGGCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGAA 4584
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4585 AAGTGAGGTGTACATTAAACATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACT 4658
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4659 AGTGTAATGTACCTCTCACTTCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAAA 4732
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4733 AAGGCTTCAATACCAGTTGGCTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTCT 4806
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4807 GTGGGGACTTTCAAAGCCAATTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAGA 4880
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4881 AATTCTAATCTTTGCTATAAAGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAGA 4954
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4955 TGATTTATGAACATGGATTTCTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTCA 5028
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5029 TTTCACAGACTCATAAACACACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTTA 5102
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5103 TTATGCCTTCATTTTTGTGGTTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAAC 5176
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5177 TCAGTGAATATCTTGCCTTTTCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTATG 5250
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5251 TCTATCTAAAAATCAAGTCTCGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAGA 5324
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5325 TCATCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAAA 5398
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5399 TTAGCCAGGCGTGGTGGCGCGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCC 5472
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5473 GGCAGGAAGAGGTTGCATTGAGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCT 5546
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5547 CAAAAAAAAATCATTCAAGTTTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATCT 5620
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5621 GAAAGTGATGCCGGTGTCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAG 5694
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5695 AGCTTGCTTCACAGCCTTTGAAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCA 5768
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5769 GCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGGG 5842
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5843 TTAGCCAGACTTTTTTCCACTCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTCT 5916
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5917 TATTGTGATTTTTGAGTCTAAATGATCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAAA 5990
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5991 TTATGGCAACATTCATTTGGAGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACTG 6064
Query 280 -------------------------------------------------------------------------- 279
Sbjct 6065 CAGTTTATAGAATAATTGAGCTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGAA 6138
Query 280 --------------------- 279
Sbjct 6139 ATGGCTGAATCTCGATACGAA 6159
