Nucleotide Global Alignment
Description
- Query:
- TRCN0000468959
- Subject:
- NR_135756.2
- Aligned Length:
- 5720
- Identities:
- 247
- Gaps:
- 5445
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGAAATGGACCAATT 74
Query 1 -----------------------------------------------ATGGCGTCCGAACTTTGTAAGACGATC 27
|||||||||||||||||||||||||||
Sbjct 75 TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATC 148
Query 28 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 222
Query 102 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTG------- 168
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGATACCTG 296
Query 169 ---CCAGAAAACCTTGCT-------CAGAAG-----------CTTCCAAACCT------TGTGGAACTGA-AGA 214
.||.|.|||.|.|.| |.|||| |||..|||.|| |.||||.||.| .||
Sbjct 297 CACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGA 370
Query 215 CAACTG--TTAG---TTTTGTG----------------------GCTT-------------------------- 235
||| || |||| ||.|.|| ||||
Sbjct 371 CAA-TGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAAC 443
Query 236 --ACTGC---TGCTCCACCCAGTGTCTGCAGACTTTTGACC-----------TGCTGAGT-------------- 279
||||| |.||.|..|||||..|| .|||.|.|||| ||.|..||
Sbjct 444 CAACTGCAATTCCTACCTCCAGTACCT---CACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCT 514
Query 280 -------------------------------------------------------------------------- 279
Sbjct 515 GCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGA 588
Query 280 -------------------------------------------------------------------------- 279
Sbjct 589 TCTCGAGAACTACAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAA 662
Query 280 -------------------------------------------------------------------------- 279
Sbjct 663 AGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGC 736
Query 280 -------------------------------------------------------------------------- 279
Sbjct 737 AGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAA 810
Query 280 -------------------------------------------------------------------------- 279
Sbjct 811 TTGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATT 884
Query 280 -------------------------------------------------------------------------- 279
Sbjct 885 ACCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCA 958
Query 280 -------------------------------------------------------------------------- 279
Sbjct 959 TCGTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGT 1032
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1033 TTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCT 1106
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1107 CAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGC 1180
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1181 GGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAG 1254
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1255 TTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTT 1328
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1329 TACAGAAACCATTTAGATTGATGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTG 1402
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1403 ACTTGATCATCTAGCCAGATTCCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTT 1476
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1477 GCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGA 1550
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1551 GGAGTTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGA 1624
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1625 GGCTCCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCT 1698
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1699 ACAGTGTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTT 1772
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1773 TTTTAAAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAG 1846
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1847 AATTTGAGGAATATTTGAAGCTTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGA 1920
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1921 AAGGGGGAGAAAACACACATTGAAATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATACTG 1994
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1995 ACTTTGAAATATTTTTGTCACATGTGAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAG 2068
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2069 ACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGG 2142
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2143 GTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATT 2216
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2217 TTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCG 2290
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2291 CACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACA 2364
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2365 GGATGATTCAAAGTACAGCCCGTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTC 2438
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2439 GTTTCTTGTATACTTAGCTTACTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTT 2512
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2513 CGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAG 2586
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2587 TCACGTATTTGCTCTTCCTTTCAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTG 2660
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2661 TGAAGTGATTCTTTTTTTAAAATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAA 2734
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2735 GAATTTGCTTGGTAGAAAAATTATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATT 2808
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2809 AGCTGCCCTGACTTTATAATGCTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGAT 2882
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2883 CTTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCG 2956
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2957 TGTGTTCCCACTGTATCTGCACTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAAC 3030
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3031 ATTTCAAAGGCTTATAGTAAAATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAAT 3104
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3105 TGAAGTTTAACATAACCTCTACATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCT 3178
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3179 TCAGGCCTAAGTGACTGCTACCTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCT 3252
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3253 ACAATCATATGTCATGGAATGGAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGA 3326
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3327 TACATTAGTTTTACCTTGTTTGAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGA 3400
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3401 ACTACGGTGTGTTAAACAACAGCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTA 3474
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3475 CAGCACCTGAACTTAATTGATGAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTAT 3548
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3549 GCTGGATTTATCGATGTCATTCTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTA 3622
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3623 CATGCTATATATTTGAATTGTGTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCT 3696
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3697 TGAGCAACAGTTACACTAGGTAGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAA 3770
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3771 GTATCATCTCTGTTCAGGTAAGTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGAT 3844
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3845 AGCCTCATGAGCATAGGCCTTCCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTT 3918
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3919 CTTCAGTATGTCCAATTGTTATCATACCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTT 3992
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3993 CAGTTAATACATGTTTTGAGCACATTCTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGC 4066
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4067 TTGGGTGGAGGATCCACTCTGGCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGA 4140
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4141 AAAGTGAGGTGTACATTAAACATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGAC 4214
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4215 TAGTGTAATGTACCTCTCACTTCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAA 4288
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4289 AAAGGCTTCAATACCAGTTGGCTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTC 4362
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4363 TGTGGGGACTTTCAAAGCCAATTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAG 4436
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4437 AAATTCTAATCTTTGCTATAAAGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAG 4510
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4511 ATGATTTATGAACATGGATTTCTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTC 4584
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4585 ATTTCACAGACTCATAAACACACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTT 4658
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4659 ATTATGCCTTCATTTTTGTGGTTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAA 4732
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4733 CTCAGTGAATATCTTGCCTTTTCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTAT 4806
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4807 GTCTATCTAAAAATCAAGTCTCGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAG 4880
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4881 ATCATCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAA 4954
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4955 ATTAGCCAGGCGTGGTGGCGCGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACC 5028
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5029 CGGCAGGAAGAGGTTGCATTGAGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTC 5102
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5103 TCAAAAAAAAATCATTCAAGTTTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATC 5176
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5177 TGAAAGTGATGCCGGTGTCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAA 5250
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5251 GAGCTTGCTTCACAGCCTTTGAAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGC 5324
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5325 AGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGG 5398
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5399 GTTAGCCAGACTTTTTTCCACTCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTC 5472
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5473 TTATTGTGATTTTTGAGTCTAAATGATCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAA 5546
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5547 ATTATGGCAACATTCATTTGGAGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACT 5620
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5621 GCAGTTTATAGAATAATTGAGCTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGA 5694
Query 280 ---------------------- 279
Sbjct 5695 AATGGCTGAATCTCGATACGAA 5716
