Nucleotide Global Alignment
Description
- Query:
- TRCN0000468959
- Subject:
- XR_391360.3
- Aligned Length:
- 2855
- Identities:
- 247
- Gaps:
- 2582
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTTCGTTGCCCTGGCCCCCTTCTTCCCCGAACCCTACTCCAGTTAGCCAGGCCCGCCTCTCCGCAGGCTCCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGTAGCCCCGCCCTCCCTGTGTTTTTAGACTGCCTACCAGCGCAGCCTGAGCCGCTGAGTGCCGGTCAGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGCCGAGAATTGGACCAAATGGACCAGTTTTGACAAGATGTAGTGCGACAGCACTTCCGGTTGGACATGTTCA 222
Query 1 ---ATGGCGTCCGAACTTTGTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTA 71
|||||.||||||.|.||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||
Sbjct 223 GTCATGGCATCCGAAATCTGTAAGACGATCTCTGTGGCCAGGCTTGAAAAGCACAAGAATTTGTTCTTAAATTA 296
Query 72 TAGGAATCTGCACCATTTTCCATTGGAGTTACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGA 145
.|||||||||||||||||||||.|||||||.|||||.||||||||.||||||.||.|||||||.||||||||||
Sbjct 297 CAGGAATCTGCACCATTTTCCACTGGAGTTGCTGAAGGATGAGGGGCTGCAGCACCTGGAGAGGCTCTATATGA 370
Query 146 AAAGGAACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTG--------- 210
|||||||||||||.|||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAAGGAACTCCCTCACAACCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGTACCTTCAC 444
Query 211 --AAGACAACTGTTAGTTTTGTGGCTTACTG-------CTGCTCC--------AC-CCAGTGTCTG-----CAG 261
|| |.||| .||| |||||| ||.|.| |.|.||| || |||||||||| |||
Sbjct 445 TCAA-ATAAC--ATAG--TTGTGG-TTCCAGAAGCCATCGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAG 512
Query 262 -----------------ACTTTTGACCTG-----------CTGAGT---------------------------- 279
.|.||||.||.| |||||.
Sbjct 513 TGACAATGCCTTAGAGATCGTTTGCCCAGAAATCGGTGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAATA 586
Query 280 -------------------------------------------------------------------------- 279
Sbjct 587 ACCAGCTACAGTTCCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTAGCAATCGC 660
Query 280 -------------------------------------------------------------------------- 279
Sbjct 661 TTGCTAGCTTTACCCGAGAGGCTTCACCTGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGCAATCGGCTATG 734
Query 280 -------------------------------------------------------------------------- 279
Sbjct 735 CTGTGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCATCTTGCATCTT 808
Query 280 -------------------------------------------------------------------------- 279
Sbjct 809 TGCCCATTGATTTAGGTCGCTCCCGAGAACTGCAGTACGTGTATGTGGATAACAACATCCAGCTGAAGGGCCTG 882
Query 280 -------------------------------------------------------------------------- 279
Sbjct 883 CCCTCATACCTCTACAACAAAGTCATCGGCTGCAACGGATCTGAACTTTTTGTCTCCAATCTCATTACCCAGAA 956
Query 280 -------------------------------------------------------------------------- 279
Sbjct 957 GTCTCCTGGAGCTGCTGCACTGCCCCCTGGGGCACTGTCACCTGTGTAGTGAGCCCATGTTTACCTTCGTCTAT 1030
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1031 CCTAAGATCTTCCCCTTGAGAGAGACGCCGATGGCAGGCCTGCACCAGAGGAGGACAAGTATTGGCTTCGTGGC 1104
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1105 TTACTGCTGCTCCACCCAGTGTCTGCGGACTTTTAACCTGCTGTGTTGATAAACACTCGAGAGCCTTAGGAGCA 1178
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1179 CTGCCAGCTCAGCCACTGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGCCAGGCAG 1252
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1253 GACAGACCCTTCCATCCTGCCTGCCCTGTCCTGAGGAGGGCCGTGCTGAACTCTGGGAATGTCCTGATTGGGCT 1326
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1327 TCACAACTAAAAGGCCTTCGCTTTTCCCTCAAGTCGGAATACATCCTCCCCCAAATGAAGGACGTGTTGTCTTC 1400
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1401 TGTGTTTTTCTTTGTATGTGAGTGTGTCTCATATATAAACTTAGTCAAATGAGCTTCCCCACATCTAATTTAAA 1474
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1475 GCGAGCTGCAGTTCCCTGAAGAACTCTTAATTTGATAATAGAACCAAATTAACTGTTGGATGACATACGTTTGG 1548
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1549 TGATGATCCTGCCTTCCCCCAGAGGATGATTTCCCCTGGAGATTATTCTTAGGAGCTTCTCCATTGGAAACTTG 1622
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1623 TCACTTTCTAGAGTCTCTGCAACGCCTATGGCCTCAGCAGCCAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGC 1696
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1697 AGCTAGGCTCCTGCAGAGGCACAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTATTTCTAAGT 1770
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1771 TTTGCAACCTAGGAAGACATTTTTTGAGAGGGATTTAAAAACAAAAATGTAGACACAAATTAAATATACTTTTG 1844
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1845 TTCTAAACTACTATAGAAAAAGAAGTTTTGAATTTTTTTTTTTTTTTTTTTGCTAAGATTTTCCTATAATTGGG 1918
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1919 AAGTTTGAGGCATCTGATGCTCTGCTGTGGATGGGGCTTAGTGGTATTTACCCGGTACATGAAATTGCCTTCAT 1992
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1993 TTTCCTCTGACTTCTCCCTAGGGAAACAGAAGGAATGAACGGGTCCACATCCCACCTTTGCAAAAATCCCATGA 2066
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2067 GCTTTCCCTTGCCAGAGAGATGAGCTCTCTGGGGGGACAGCTGATTGGCTCTTCCTCTGAAAGGATGCCACCAT 2140
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2141 AATCTGTTTTACTTTCAGGTGTTCGTTGGGCTGCTTTGGGGGGGGGGTAAAAGTTCTCTGTTTACTGGTATGAT 2214
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2215 TTATGTAAGACAAGACTGAAAGGGGAATCAAGAAGGCTTGCTTGGTGGGAAAGCTATTTCCCAAAACTTTGGTT 2288
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2289 GGTGACATTTTGTTAGCCAGCCTGACTGTAATTCTAGGCTCTAACAGTGCCAAAAATCCTACATAGTTACTGAC 2362
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2363 AAGTGTGTGATCTCTTTGCAGTCACACCACCTGCTGCCTGAAAAGCAGACTCTTCCAAGTAATGGCAGAGGCAG 2436
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2437 AAAGCGGCCATGCATGCCATGTGTGGCCACTGTCCCTACTTCCTCCCGTCCCTTTCACAACTTGCTCTGTTCAG 2510
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2511 CCTTAATATTTCAAAGGCCTACAGTATAATAGGAGCTGAGCGTCTGGATCAAGTGTATCTCTTCTTTCATCCTT 2584
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2585 TCGGAAGAATGGAAGTTTCAGCACAACCCCGACATGTATATAAGCTGAAGGCAGGAAAATGTGGCCTGACACTT 2658
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2659 CACATCCGTGCTTGACTTAATTGAACGACAGGGAAACACAGGGCTGCATCTGTGTTTTGCCCTCGACCATCTTA 2732
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2733 TGTCTTAAGTGGAGCTATGAAATGTCACCCTGATACTCAGGAATTCTCATTGAGAGAAGGTGTGGGATACTTTT 2806
Query 280 ------------------------------------------- 279
Sbjct 2807 GTTCTAACTTGTTTAAATTCTTAATAAAGGTGTTTACACTCCA 2849
