Nucleotide Global Alignment

Description

• Query: TRCN0000469079
• Subject: NM_001317238.2
• Aligned Length: 1962
• Identities: 1504
• Gaps: 360

Alignment

Query    1  ATGTCGTGGCTCTTCGGCATTAACAAGGGCCCCAAGGGTGAAGACGCGGGGCCGCCGCCGCCTTTGCCGCCCGC  74
                                                                           .|||.|  |..
Sbjct    1  ---------------------------------------------------------------ATGCAG--CTG  9

Query   75  GCAGCCCGGGGCCGAGGGCGGC------------GGGGACCGCGGCT-TGGGAGACCG-GCCGGCGCCCAAGGA  134
            |.|||||.|..||   .||.||            |||.||.|.|.|| ||     ||| |||||.||       
Sbjct   10  GAAGCCCTGAACC---TGCTGCACACACTAGTCTGGGCACGGAGTCTCTG-----CCGTGCCGGAGC-------  68

Query  135  CAAATGGAGCAACTTCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTT  208
                 .|.|||     |||        .|.|||||| ||.|.| ||||.|                        
Sbjct   69  -----TGTGCA-----GAC--------ACAGGAGCG-GCTGTC-AGGCAG------------------------  98

Query  209  ATGCCAAGGACGCCCTGAATCTGGCACAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGT-CCAAGCTC--  279
             |||||     |||||||             |||.|.||        |||.|||.|    ||| |...||||  
Sbjct   99  -TGCCA-----GCCCTGA-------------GCAAGTGC--------CAGCTGGTG----AGTGCTGTGCTCTG  141

Query  280  AAAGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGAC  353
            .|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  142  CAGGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGAC  215

Query  354  CCTGAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGG  427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  216  CCTGAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGG  289

Query  428  ACCAACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAA  501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  290  ACCAACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAA  363

Query  502  GCCATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGA  575
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  364  GCCATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGA  437

Query  576  GGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCG  649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  438  GGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCG  511

Query  650  AGCACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTG  723
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  512  AGCACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTG  585

Query  724  ACAGACTGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAA  797
            ||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  586  ACAGACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAA  659

Query  798  TGCCAC-GCTTGTCGCCGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGC  870
            |||.|| || .|||.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  660  TGCGACAGC-CGTCACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGC  732

Query  871  ATCACGGTGCTTGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCT  944
            |||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  733  ATCACGGTGCTGGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCT  806

Query  945  GGAGGGTGTTGTGCTCAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGA  1018
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  807  GGAGGGTGTTGTGCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGA  880

Query 1019  AGAACCGCAGCCTGTACAGGAACATCCTGATGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAA  1092
            |||||||..|||||||||||.||||||||.||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  881  AGAACCGGGGCCTGTACAGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAA  954

Query 1093  CTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGT  1166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  955  CTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGT  1028

Query 1167  GACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGG  1240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||||||.|
Sbjct 1029  GACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAG  1102

Query 1241  ACGCCTTCCTTCGGAAGCGAGCCACCGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTAC  1314
            |||||||||||||||||||||||||.|||.||||||||.||||||||||.||||||||||||||||||||||||
Sbjct 1103  ACGCCTTCCTTCGGAAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTAC  1176

Query 1315  CGCACGGGCCAGCACAGCAACAAGTTCATGCTGGTCCTGGCCAGCAACCAACCAGAGCAGTTCGACTGGGCCAT  1388
            |.||.||||||.|||||||||||.|||||||||||||||||||||||.|..||.||||||||||||||.|||||
Sbjct 1177  CACATGGGCCAACACAGCAACAAATTCATGCTGGTCCTGGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCAT  1250

Query 1389  CAATGACCGCATCAATGAGATGGTCCACTTCGACCTGCCAGGGCAGGAGGAACGGGAGCGCCTGGTGAGAATGT  1462
            |||...||||||..|.|.|||||||||||||||||||||...|||||||||.||||||||||||||||||.||.
Sbjct 1251  CAACAGCCGCATTGACGTGATGGTCCACTTCGACCTGCCGCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGC  1324

Query 1463  ATTTTGACAAGTATGTTCTTAAGCCGGCCACAGAAGGAAAGCAGCGCCTGAAGCTGGCCCAGTTTGACTACGGG  1536
            ||||||||||.|.|||||||||||||||||||||||||||.|.|||||||||||||||||||||||||||||||
Sbjct 1325  ATTTTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGG  1398

Query 1537  AGGAAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTG  1610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1399  AGGAAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTG  1472

Query 1611  GCAGGCCACGGCGTATGCCTCCGAGGACGGGGTCCTGACCGAGGCCATGATGGACACCCGCGTGCAAGATGCTG  1684
            ||||||||||||.|||||||||.|||||||||||||.||.|||||||||||||||.||.|.|||||||||||||
Sbjct 1473  GCAGGCCACGGCATATGCCTCCAAGGACGGGGTCCTCACTGAGGCCATGATGGACGCCTGTGTGCAAGATGCTG  1546

Query 1685  TCCAGCAGCACCAGCAGAAGATGTGCTGGCTGAAGGCGGAAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCC  1758
            ||||||||.|||..|||||||||.||||||||||||||||.|||||||||||.||||.|||||.|.|||.||||
Sbjct 1547  TCCAGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCC  1620

Query 1759  --------------------------------------------------------------------------  1758
                                                                                      
Sbjct 1621  GGAGTCCAAGGCGAGACCCTCACCTCATGGAGCCTGGCCACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTG  1694

Query 1759  --------------------------------------------------------------------------  1758
                                                                                      
Sbjct 1695  CACATTTAGGATATGCTCCTGGATGGGGACTGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTG  1768

Query 1759  --------------------------------------  1758
                                                  
Sbjct 1769  GCGGTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTG  1806