Nucleotide Global Alignment
Description
- Query:
- TRCN0000469079
- Subject:
- XR_001737468.1
- Aligned Length:
- 3052
- Identities:
- 1684
- Gaps:
- 1295
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGCATTTCCGTCGCCGGGAGGAAGGGGTGTGTGTTTCGCCTGCGCAGTGGTCCTGGCCACCGGCTCGCGGCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGAGGCTGCTCCCAGCCGCGCCCGAGTCAGACTCGGGTGGGGGTCCCGGCGGCGGTAGCGGCGGCGGCGGTG 148
Query 1 -----ATGTCGTGGCTCTTCGGCATTAACAAGGGCCCCAAGGGTGAAGACGCGGGGCCGCCGCCGCCTTTGCCG 69
||||||||||||||||||.||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 149 CGAGCATGTCGTGGCTCTTCGGCGTTAACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCG 222
Query 70 CCCGCGCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGCTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAG 143
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 223 CCCGCGCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGTTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAG 296
Query 144 CAACTTCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTATGCCAAGG 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 297 CAACTTCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTACGCCAAGG 370
Query 218 ACGCCCTGAATCTGGCACAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAG 291
|.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGCCCTGAATCTGGCGCAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAG 444
Query 292 GCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGA 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGA 518
Query 366 GACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGC 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGC 592
Query 440 AGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGA 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGA 666
Query 514 GCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGAGGCCCGGGCGCG 587
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 667 GCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCG 740
Query 588 CGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCGAGCACCGTCAGA 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 741 CGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGA 814
Query 662 CCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACTGGGAC 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 815 CCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGAC 888
Query 736 AAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAATGCCAC-GCTTG 808
|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|| || .|
Sbjct 889 AAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGC-CG 961
Query 809 TCGCCGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTT 882
||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 962 TCACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTG 1035
Query 883 GAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCTGGAGGGTGTTGT 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1036 GAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGT 1109
Query 957 GCTCAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGAACCGCAGCC 1030
|||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||..|||
Sbjct 1110 GCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGAACCGGGGCC 1183
Query 1031 TGTACAGGAACATCCTGATGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCAC 1104
||||||||.||||||||.||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 TGTACAGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCAC 1257
Query 1105 TCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCA 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 TCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCA 1331
Query 1179 CAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTC 1252
||||||||||||||||||||||||||||||||||||||||||||||||..||||||||||.|||||||||||||
Sbjct 1332 CAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACGCCTTCCTTC 1405
Query 1253 GGAAGCGAGCCACCGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAG 1326
|||||||||||||.|||.||||||||.||||||||||.|||||||||||||||||||||||||.||.||||||.
Sbjct 1406 GGAAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCACATGGGCCAA 1479
Query 1327 CACAGCAACAA--------------------------------------------------------------- 1337
|||||||||||
Sbjct 1480 CACAGCAACAACCCCAGTCACGTGTCACACGGAGGATCAAGTCCTGCTGGTCGGCCGTGGCTGACTCTTCAGGC 1553
Query 1338 -------------------------------------------------------------------------- 1337
Sbjct 1554 ACGTTGGGCTCCTGGGTCAGCTGCTGCCGTTCGACGCTCCCTGGAGCCCTGACTCAGGTCCTTCCCAGAGAGGC 1627
Query 1338 -------------------------------------------------------------------------- 1337
Sbjct 1628 AAGGCTGGGGCCCTGCTGAGCCTCTGCTGAACCCGGGCCCCCGAGGTCCTGCTTCTGGCTCGCATGGCCATAAT 1701
Query 1338 -------------------------------------------------------------------------- 1337
Sbjct 1702 CTTGACAGGGACTCTGGGTCCCGCATCCCTGCTCCCAGCACAGCGGGGCTCAGGTAGCAGGAGGGAGTGGTGTT 1775
Query 1338 -------------------------------------------------------------------------- 1337
Sbjct 1776 CCCGGCACTGCCTATCAGGCTGGGCGAGGGTCAGCGGGGAAGTACCACACAGGGCAAGAACAGAGGCCCGAGAA 1849
Query 1338 -------------------------------------------------------------------------- 1337
Sbjct 1850 GCCGGGCGGGGGGCAGCTGGGCGTGGTGGGGCAGGCAGGCGGGTGACCAGGGCTGTGGCTGCGTTCTCCCCATG 1923
Query 1338 -------------------------------------------------------------------------- 1337
Sbjct 1924 TTTCCTGTGCTCACAAGCTGCCGCTTTAGATTCTCCCAAAAAGTCTCCCCGAGGGGGCTGAGGAGCCCCCGTTG 1997
Query 1338 ----------------------------------------------------------GTTCATGCTGGTCCTG 1353
.|||||||||||||||
Sbjct 1998 CCCTCGGGGCATCTCAGCTGGCAGCCCCAGCGTTTCCTTCCCCATCCCTGTCCTACAGATTCATGCTGGTCCTG 2071
Query 1354 GCCAGCAACCAACCAGAGCAGTTCGACTGGGCCATCAATGACCGCATCAATGAGATGGTCCACTTCGACCTGCC 1427
||||||||.|..||.||||||||||||||.||||||||...||||||..|.|.|||||||||||||||||||||
Sbjct 2072 GCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCATCAACAGCCGCATTGACGTGATGGTCCACTTCGACCTGCC 2145
Query 1428 AGGGCAGGAGGAACGGGAGCGCCTGGTGAGAATGTATTTTGACAAGTATGTTCTTAAGCCGGCCACAGAAGGAA 1501
...|||||||||.||||||||||||||||||.||.||||||||||.|.||||||||||||||||||||||||||
Sbjct 2146 GCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGCATTTTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAA 2219
Query 1502 AGCAGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATG 1575
|.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 AACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATG 2293
Query 1576 TCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCGTATGCCTCCGAGGACGGGGTCCTGAC 1649
|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||.|||||||||||||.||
Sbjct 2294 TCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGACGGGGTCCTCAC 2367
Query 1650 CGAGGCCATGATGGACACCCGCGTGCAAGATGCTGTCCAGCAGCACCAGCAGAAGATGTGCTGGCTGAAGGCGG 1723
.|||||||||||||||.||.|.|||||||||||||||||||||.|||..|||||||||.|||||||||||||||
Sbjct 2368 TGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGG 2441
Query 1724 AAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCC--------------------------------------- 1758
|.|||||||||||.||||.|||||.|.|||.||||
Sbjct 2442 AGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGAGTCCAAGGCGAGACCCTCACCTCATGGAGCCTGGCC 2515
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2516 ACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGATGGGGACTGGGCTGTG 2589
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2590 CCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGGCGGTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTGT 2663
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2664 AGGCACTGGCTAGGGAGGGGCAGGCCTCCTTCCTGCCCCTCGAGACACTCTTGGGAGATGCATTTTCCGTCTGG 2737
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2738 CTCACAGGGGGAGGGTGAGGCTTTGTACCCCAGCCCCTGCCCAGGCCACTGTGAGGGTGGGTGCTGGCTGAGCC 2811
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2812 CCTGGGGCAGAAGGAGTGGGGCAGGCGGGGTCTTTGTTCTCGGCTCCCACAGCAGAGCCAGGTGAGGGGGGGCC 2885
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2886 TGCCAGGACTAGACAGAAGTGGGGCGGCCTGAACCCTGCTTCCAGCCATGGCCAGGGGCCACGGAACCCGGCAG 2959
Query 1759 -------------------------------------------------------------------------- 1758
Sbjct 2960 GGGTGTCTGAGGCCGCCCTGTCAGCTGGCCGGTCCAAGCCTGTGGCTGGAGCTGGTGTGTGTTTATCTAATAAA 3033
Query 1759 ------------------ 1758
Sbjct 3034 GTCCCACAGGTGCCTCAC 3051
