Nucleotide Global Alignment

Description

Query:
TRCN0000469320
Subject:
NM_028279.3
Aligned Length:
2236
Identities:
814
Gaps:
1301

Alignment

Query    1  ATGGC--------GGAATCCAGGGGCCGTCTGTACCTTTGG-ATGTGCTTGGCTGCTGCGCTGGCATCTTTC--  63
            |||||        ||.|||         ||.||..|||.|| ||||||.|..|.||.|.||||||.||.|||  
Sbjct    1  ATGGCAAGGCCTAGGCATC---------TCCGTGGCTTGGGAATGTGCATTACCGCGGTGCTGGCCTCCTTCAT  65

Query   64  --CTGATGGGATTTATGGTGGGCTGGTTTATTAAGCCTCTCAAAGAAACAACCACTTCTG-TGCGCTATCATCA  134
              ||    ||.||||..|||||||||||||||||||||||||||||||||||.||||||| || |.||||||||
Sbjct   66  CGCT----GGCTTTACTGTGGGCTGGTTTATTAAGCCTCTCAAAGAAACAACTACTTCTGCTG-GTTATCATCA  134

Query  135  AAGTATACGGTGGAAACTGGTATCCGAAATGAAAGCTGAAAACATCAAATCATTTCTTCGTTCTTTTACAAAGC  208
            ||||||||....||||||..||||.||||||||||||||||||||.|.|||||||||||||||.||||||||.|
Sbjct  135  AAGTATACAACAGAAACTCCTATCTGAAATGAAAGCTGAAAACATTAGATCATTTCTTCGTTCCTTTACAAAAC  208

Query  209  TTCCTCATCTGGCAGGAACAGAACAAAATTT-CTTGCTTGCCAAGAAAATCCAAACCCAGTGGAAGAAATTTGG  281
            ||||.||||||||||||||.||||||||||| ||| ||||||||||||||||||||.|||||||||||||||||
Sbjct  209  TTCCCCATCTGGCAGGAACGGAACAAAATTTACTT-CTTGCCAAGAAAATCCAAACACAGTGGAAGAAATTTGG  281

Query  282  ACTAGATTCAGCCAAGTTGGTTCATTATGATGTCCTCTTATCTTACCCCAATGAGACAAATGCCAACTATATAT  355
            |.||||||||||.||..||||||||||.|||||.|||||.|||||.||.||||||||.|||||.||||||.|||
Sbjct  282  ATTAGATTCAGCTAACCTGGTTCATTACGATGTTCTCTTGTCTTATCCAAATGAGACCAATGCAAACTATGTAT  355

Query  356  CGATTGTGGATGAACATGAAACTGAGATTTTCAAAACATCATACCTTGAACCACCACCAGATGGCTATGAGAAT  429
            |.|||||||||||.||||.|..|||||||||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct  356  CCATTGTGGATGAGCATGGAGTTGAGATTTTTAAAACATCATACCTTGAACCACCACCAGATGGATATGAGAAT  429

Query  430  GTTACAAATATTGTGCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGGAGATCTTGTATATGTGAA  503
            ||||||||.||..|.||||||||.|||||.||.||||||...||||||||.||||||||.|||||.|||||.||
Sbjct  430  GTTACAAACATCATACCACCATACAATGCGTTTTCAGCCAGCGGCATGCCGGAGGGAGAGCTTGTGTATGTCAA  503

Query  504  CTATGCTCGCACTGAAGACTTTTTCAAACTAGAAAGAGAGATGGGCATCAACTGTACTGGGAAGATTGTTATTG  577
            |||.|||||.|||||.|||||.|||||||||||||||||.|||..|||||||||.|||||.|||||||||||.|
Sbjct  504  CTACGCTCGTACTGAGGACTTCTTCAAACTAGAAAGAGAAATGAACATCAACTGCACTGGCAAGATTGTTATCG  577

Query  578  CAAGATATGGAAAAATCTTCAGAGGAAATAAAGTTAAAAATGCCATGTTAGCAGGAGCCATAGGAATCATCTTG  651
            ||||||||||.||.|||||.||||||||.|||||.||||||||||||.||||.||.|||||.||||||||..||
Sbjct  578  CAAGATATGGGAAGATCTTTAGAGGAAACAAAGTCAAAAATGCCATGCTAGCTGGGGCCATGGGAATCATTCTG  651

Query  652  TACTCAGATCCAGCTGACTACTTTGCTCCTGAGGTACAGCCATATCCCAAAGGATGGAATCTTCCTGGAACTGC  725
            |||||.||||||||||||||||||||.|||||.||.|||||||||||||||||||||||.|||||||||.||||
Sbjct  652  TACTCTGATCCAGCTGACTACTTTGCCCCTGATGTGCAGCCATATCCCAAAGGATGGAACCTTCCTGGAGCTGC  725

Query  726  AGCCCAGAGAGGAAATGTGTTAAATTTGAATGGTGCTGGTGACCCACTCACTCCAGGCTATCCAGCAAAAGAAT  799
            |||.||||||||||||||.||||||.|||||||.||.|||||||||||||||||||||||||||||.|||||||
Sbjct  726  AGCTCAGAGAGGAAATGTCTTAAATCTGAATGGGGCAGGTGACCCACTCACTCCAGGCTATCCAGCTAAAGAAT  799

Query  800  ACACTTTCAGACTTGATGTTGAAGAAGGAGTGGGAATCCCCCGAATACCTGTACATCCCATTGGATATAATGAT  873
            ||||.|||||||||..|||||||||||.||||||.||.||....||||||||||||||.|||||||||||||||
Sbjct  800  ACACCTTCAGACTTCCTGTTGAAGAAGCAGTGGGGATTCCAAACATACCTGTACATCCTATTGGATATAATGAT  873

Query  874  GCAGAAATATTATTACG--------------------------------------------GTAT-------AG  896
            |||||.|.|.|||||||                                            ||.|       ||
Sbjct  874  GCAGAGAGACTATTACGCAACTTGGGAGGAGCTGCTCCACCAGACAAAAGCTGGAAGGGAAGTCTAAATGTCAG  947

Query  897  TT------TT--------CTT--------GT----------------------TGGAT----ATGAGATTAAGA  922
            ||      ||        |||        ||                      ||.||    ||.|.|||||.|
Sbjct  948  TTACAATATTGGGCCTGGCTTTACAGGAAGTGAATATTCCAGGAACATTAGAATGCATGTTAATAACATTAACA  1021

Query  923  ---------------------TATTTTGCACTA-------GT-------------------TGTCTATTTTC--  947
                                 ||.||.|.||||       ||                   |||| |||.||  
Sbjct 1022  AAATCACAAGAATTTACAATGTAATTGGAACTATCAGAGGGTCTACAGAACCTGACAGGTATGTC-ATTCTCGG  1094

Query  948  ---TCAT-------------------------------------------------------------------  951
               ||||                                                                   
Sbjct 1095  AGGTCATCGTGACTCCTGGGTGTTTGGAGGGATTGACCCTACCACTGGGACAGCAGTTTTGCAAGAGATTGCGC  1168

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1169  GAAGTTTTGGGAAACTTGTGAATGGAGGTTGGAGACCTAGGAGAACTATCATTTTTGCCAGCTGGGATGCAGAG  1242

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1243  GAGTTTGGGCTGCTGGGGTCAACTGAATGGGCTGAAGAGAATGCAAAGCTCCTACAGGAGAGAAGCATTGCTTA  1316

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1317  CATCAACTCAGATTCTGCTATAGAAGGTAATTACACTCTTCGAGTTGATTGTACTCCTCTTCTAAACCAGCTGG  1390

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1391  TTTACAAAGTGGCAAGAGAGATCTCCAGTCCTGATGATGGTTTTGAAAGTAAATCACTTTATGAAAGCTGGCTG  1464

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1465  GAAAAAGACCCTTCACCTGAAAATAAAGAGTGTCCTAGAATCAATAAGCTTGGATCTGGGAGTGATTTTGAGGC  1538

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1539  TTACTTCCAAAGACTTGGAATTGCTTCAGGCAGAGCTCGCTACACTAAGAACAAGAAAACAGATAAATACAGTA  1612

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1613  GCTATCCTGTATATCATACCATCTATGAGACGTTTGAATTAGTACAGAACTTTTATGACCCCACATTTAAAAAG  1686

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1687  CAACTGTCTGTGGCTCAGTTACGAGGAGCATTGGTATATGAGCTTGCAGACTCTGTGGTCATTCCTTTCAACAT  1760

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1761  TCAAGACTATGCAAAAGCCTTGAAAAACTATGCAGCAAGTATTTTCAACATATCCAAGAAACACGACCAGCAAT  1834

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1835  TGAGAAACCATGCAGTGTCATTTGATCCCTTATTTTCTGCTGTGAAAAACTTTTCGGAGGCTGCTTCAGATTTT  1908

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1909  CACAGAAGACTTACACAAGTTGATCTTAATAATCCTATTGCAGTGAGAATTATGAATGACCAGCAGATGCTTCT  1982

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1983  TGAAAGAGCATTCATAGATCCTCTTGGTTTACCTGGGAGGAAGTTCTACAGGCACATCATCTTTGCTCCAAGCA  2056

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 2057  GCCACAACAAATATGCCGGAGAATCATTCCCTGGGATTTATGATGCCATGTTTGATATTGAAAATAAGGCAGAC  2130

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 2131  CCTTCCTTGGCCTGGGCAGAAGTGAAGAAACATATTTCTATTGCAGCTTTTACAATTCAGGCAGCAGCGGGGAC  2204

Query  952  ----------------  951
                            
Sbjct 2205  ACTGACCAATGTGTTA  2220

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