Nucleotide Global Alignment
Description
- Query:
- TRCN0000469413
- Subject:
- XR_930901.3
- Aligned Length:
- 3804
- Identities:
- 1100
- Gaps:
- 2700
Alignment
Query 1 --------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 74
Query 43 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 148
Query 117 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTG 190
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 149 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG 222
Query 191 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 296
Query 265 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCGATCTACGGTTTTGGGATTTTTTTATATATACTGTA 338
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 370
Query 339 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 444
Query 413 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 518
Query 487 AAATTATTCAACAGAGTGGGACCTAATGGTGAG---AGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTT 557
||||||.|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAATTAATCAACAGAGTGGGACCTAATGGTGAGAGCAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTT 592
Query 558 GCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAG 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAG 666
Query 632 AAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCA 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCA 740
Query 706 GACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAAT 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAAT 814
Query 780 AGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCA 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCA 888
Query 854 GAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGAC 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGAC 962
Query 928 GAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAA 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAA 1036
Query 1002 AGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACAGATAAAGCATATACAGGCAGCATGC 1075
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1037 AGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGC 1110
Query 1076 TGAGGAAGCGTAACCCCCAGGGTTTAGAG--------------------------------------------- 1104
|||||||||||||||||||||||||||||
Sbjct 1111 TGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGATG 1184
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1185 GGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAACGAACATCAGC 1258
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1259 TTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCTTTGGGCCTTG 1332
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1333 AGCAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGTTCAGGTAGGA 1406
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1407 AATGCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACACTCTCAAAGT 1480
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1481 TCTCTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATATTGAGAAAAAA 1554
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1555 CATGAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTTATTTCCCTTT 1628
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1629 TTTTATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACCAGTTTCCCCA 1702
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1703 TGAATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGTGTCTGTGCCA 1776
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1777 GGGCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTGAG 1850
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1851 ATGTCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGTCTCCGGGT 1924
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1925 GCCTTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAACTGTAGCCTC 1998
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1999 CCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTCGAGGTCCTGT 2072
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2073 TTAAATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTTCATCTCTACA 2146
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2147 GCCCTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAG 2220
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2221 ACCCTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGA 2294
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2295 TGAACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGAT 2368
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2369 CTCTTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATT 2442
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2443 AGGAAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTT 2516
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2517 GTTGATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAG 2590
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2591 TTTGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAA 2664
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2665 GCACAGTTTTGCAAATTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCACTCCAAAATA 2738
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2739 GGAAAAGACAATCTTGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAG 2812
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2813 ATACTGCACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTAGGAAACTCTG 2886
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2887 GATCTCAGCCTCATCTCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAGAGGAGGAGAG 2960
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2961 GAGAGGGATGTGATGTCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGTGATGAGAGCT 3034
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3035 ATAAAGGTAGTGATGAAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGACAATGTAACA 3108
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3109 TCTTTATCTTGTGGTTAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAGCTACTAAGTG 3182
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3183 CAGTAGTGCTTTCTATAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACCTGTCGTAATC 3256
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3257 TATCTGTTCTGCCCCTCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTCAAACAAGAGC 3330
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3331 CTAGCCCTTGGCTTATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAGAGTCCCAACT 3404
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3405 CTGGGCCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCTGGAGAAGTGT 3478
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3479 AATCTGAGGGCCACTTGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAG 3552
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3553 GCCAGTGTTACTGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCATAACAGAGCC 3626
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3627 ATGGAAATGGCTATCCCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCTTTTTCTTTGA 3700
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3701 AACCAACCCTGTCACTTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAAATGTCCTGCT 3774
Query 1105 ------------------------------ 1104
Sbjct 3775 ATTTTCAGAATGGAGAAAAAAAAAAAAAAA 3804
