Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_028459.2
- Aligned Length:
- 6938
- Identities:
- 245
- Gaps:
- 6656
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACATTGCCTGAATAACTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGGTTATAAGCAATGCCTTGAAAGTTTGGGGTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAACTAATCCTGTTCAACAGTCCAGAGTATCAGAGGCTCAGGATCGATCCTATAAATGAAAGATCATTTATAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAATTATAAGGAACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTCCAGAATTAATATCAGATACATATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTCGTTAAGGGTGATCTGCCAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACCAAAACTTATTGGAGAAGAATTAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTAGAAGCAAATGATGGCTCAGGAATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAAGAAATTGACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAAACATATCTCAAGATATGACACAGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCTACTTTGAAAATCACAACTCAGAAGTAGATGAAGGAAAATTCTGATCAGCTGACATCCTCTTAATACAGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGACATGCTTCAGGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAATACCTTTAAAAAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AATTTAGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGTCCACTTTGGTAATGTGTCAAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGATGAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTAAATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGACATTTAAAATAGTTTTCTAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTTTCTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGCATTTTTCTTGGATCTTTTTGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGACTAGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTTTTTCTGTCTTGTAGGTAAGTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCTCACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTTCAGGAAAGTATCTCTACTTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGATGTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAACTGTATACCGTGTGCTCCAGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTTCTTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATTATTTTCCCACAATTCTTTTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGATGGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCATTATTTCATGACTGGTGCGTTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTAAACTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTTTAAAATGTGTGAGCATGTGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTCCCAGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCCTTATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAAGTCTCCTTCTGTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTTAATAGCAGTTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATTTTATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTCTGCTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CACATCTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAATAATTTACTAATGAAAATATG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTTAAATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGTACTTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTGGATCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTGAGATGTACAGAGAGTTTCTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGGGTCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGATGTTTTAGTTTCAGTGTTCCCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATCCCTCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCATAAGCTAAAATCCAAGAAATTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTGCACACATTTTATCAGGGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAGTTTTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAATATCTTTTATTTATGATTATAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AATAGCTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTGTGCCAATCAGTTTTCTGAAGTTTCCCTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACACAAAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAAATGTTTCAGAAGAATTATAAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACTTTAAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAAAAAGCTAAATATTTTAAGACT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GAACATTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCATGGATATTTGTTCATTACCTTTTTCCATT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GAAAAGTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACCTAATATAAAAATGAGAAAACCAATATGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATTTTAAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAAGCACTTAAGAAAATATGGCAT 3182
Query 1 ------------------------------------------------------ATGGAGTCTTGCTCTGTCAC 20
|.|||||||||||.||||.|
Sbjct 3183 GTTTGACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGAGACGGAGTCTTGCTATGTCTC 3256
Query 21 CCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTC 94
|||||||||||.|||.||||..||||||..||||||.||||.||..|.|.||.|||||||||.|||||||||.|
Sbjct 3257 CCAGGCTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCGGGTTCAAGCAATTCTCCTGCC 3330
Query 95 TCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGAC 168
|||||||||.|||||||||||||||||||.|||||||||||||.|.|||..||||||||||||||.||||||||
Sbjct 3331 TCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCCGGCAGATTTTTGTATTTTTGGTAGAGAC 3404
Query 169 TGGGTTTTACCAT-ATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAA 241
..|||||.|.||| .||||||||.|||||||||||||||||||||||||||.|||||||||||||||.||||||
Sbjct 3405 GCGGTTTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTTGGCCTCCCAA 3478
Query 242 AGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA---------TT------------------------ 282
||||.||||||||.|||..|||||||||||||||||||| ||
Sbjct 3479 AGTGTTGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACACAC 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 TGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGCAGGCAGATCCAGAAGCACTAG 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 TGAACTGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCCATTTCTTAATTGATTGGCCAG 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 TATGAAAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTATTCAAAGCTATAGTTTATACAT 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 CAGGTACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAATTCACAAGAACTGTCCTGCTA 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 AGAAGTGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATGTTTAATATTTAAACTATTGGT 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 ATCATTTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTACAGTGGTGATGCTAGTAGAAGTTTAAGC 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 CTTGGAAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGAGTAATTTATGTTTTTAAAATTCAGAATA 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 GTTAATCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAATCATGTAAATATTTCAGTAATATAAACTG 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 TTTGAAAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATTTACAATTCACAGAATATTTTA 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 TTTAAGGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTTATTCATGATGCCAAAGTAAAT 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 GAGGAAAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTAGTCCATATTGTTTAATATTAA 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 GTTGAATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGTCTGAATTTTTGATACTATTTT 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 TAAAATCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCCGAAGTGGG 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 TGGATCACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCCATCTGTACTAAAAACTACAAA 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 AATTAGCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTGAGGCAGGAGAATTGCTTGAAC 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 CCTGGCGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTGGGCGACAGAGTGAGACTCTGT 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 CTCAAAAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAAACCGGCCCATTGGACCTGTAC 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 AGATAAAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAAAATCTTAAGTAGAAAAATAAATCTTGAT 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 GTTTTAAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGGGTGCAGTGGCTCACGCCTGTA 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 ATCCCAGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAGACCAGTCTGGGCAACATG 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 GTGAAACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACACACTTGTAATCCCAGCTACTC 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 AGGAGGCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCATTCCAGCC 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 TGCCCAACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATATATATATATATATATGTGTGTATATATAT 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 ATGTATATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGCTCACGCCTGTAATCCCAAC 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 ACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACC 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 CCATCTCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGTAATCCCAGTTACTTGGGAGGC 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 TGAGGCAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCATTGCACTCTAGCC 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 TGGGCAACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATCCGGAAACGAAGAGGCGTTGGG 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 CCGCTATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGACGGAGTCTAGCTCTGCTGCCCA 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 GGCTGGAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCA 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 GCCTCCCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGCGAATATTTGTTTTTTTTAGTAGAGACGG 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 GCTTTTACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTG 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 GGATTACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTGAATTGTTTGTTGTATCGAGTC 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 CTTAAGTATGGATATATATGTGACCCTAATTAAGAACTACCAGATTGGATCAACTAATCATGTCAGCAATGTAA 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 ATAACTTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCTTTATAACCAGCATCTTTTTGC 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 TTTAAAAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATATTTTTGTTCTAATTTGCTTTC 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 ATGAGTGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTTTTTAATTTGAAGAAAATCTTT 6290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6291 GCTATTATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAACGTAACTTCTAAATTTGTCGT 6364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6365 AATTGGCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATAGACAAAGCAATGAGAAACATT 6438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6439 AGTAAAATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATAGTTCAAGGAATGTT 6512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6513 TTCTGAATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTTTTAAATGTGATTATCTAATTT 6586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6587 TTACAACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAAATATTTGAAATTCAAGTACAG 6660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6661 AAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAGGA 6734
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6735 CCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTTATTACACACACAGGCCTTCCT 6808
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6809 GTCTGGTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCTGTTGTTAGTGTGGATGTTCAA 6882
Query 283 -------------------------------------------------------- 282
Sbjct 6883 TGAGTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTCTA 6938
