Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_031765.2
- Aligned Length:
- 6300
- Identities:
- 245
- Gaps:
- 6018
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAAAGTCCATAAAACAGACCTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACGAGTGTTAGAAGCAAATGATGGCTCAGGAATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTAAGTCGCCAAGAAATTGACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAGTTCCAGAAACATATCTCAAGATATGACACAGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGGACAGAGTTCACATCCATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATGAGTGAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGGAAAAAAATAATACCTTTAAAAAATAATTTAGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATAGGGTCCACTTTGGTAATGTGTCAAAGAGATGAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAAGTGGAACAATGCGTCGGTTGTAGGACTAAATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTAAAGACATTTAAAATAGTTTTCTAAATGTTTCTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTAGGGCATTTTTCTTGGATCTTTTTGCAGACTAGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTCTTTTTCTGTCTTGTAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AACCTTTCAGGAAAGTATCTCTACTTTCCTGATGTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTTCAACTGTATACCGTGTGCTCCAGTGTTTTCTTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTCATTATTTTCCCACAATTCTTTTGAAAGATGGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGATCATTATTTCATGACTGGTGCGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CATTTTTTAAAATGTGTGAGCATGTGCTTTCCCAGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGCTTTGTTGCAACCCCTTCTTCCTGCGCCTTATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATAGTATGCAGGCAAGTCTCCTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTTGGCCTTCAATTTTAATAGCAGTTTTATTTTATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGAGTCATGGAATGTAGGTGTCTGCTTCACATCTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGAAAATAATTTACTAATGAAAATATGTTTAAATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTAAGAACAATGGAAGTCACAGTACTTAGTGGATCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTAATTGAGATGTACAGAGAGTTTCTTGCTGGGTCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AATTGATGTTTTAGTTTCAGTGTTCCCTATCCCTCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGTTCATAAGCTAAAATCCAAGAAATTTCAGCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGTGTGGCTGCACACATTTTATCAGGGAAAGTTTTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAAAAATATCTTTTATTTATGATTATAAAATAGCTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCCAATCAGTTTTCTGAAGTTTCCCTTACACAAAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTTAAAAATGTTTCAGAAGAATTATAAAACTTTAAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GATTTAAAAAGCTAAATATTTTAAGACTGAACATTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGATATTTGTTCATTACCTTTTTCCATTGAAAAGTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TAATATAAAAATGAGAAAACCAATATGCATTTTAAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGTTAAAGCACTTAAGAAAATATGGCATGTTTGACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTT 2590
Query 1 --------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTG 66
|.|||||||||||.||||.||||||||||||.|||.||||..||||||..||||||.||||.||..
Sbjct 2591 TTTTTGAGACGGAGTCTTGCTATGTCTCCCAGGCTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCA 2664
Query 67 CGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCT 140
|.|.||.|||||||||.|||||||||.||||||||||.|||||||||||||||||||.|||||||||||||.|.
Sbjct 2665 CCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCC 2738
Query 141 GGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCAT-ATTGGCCAGACTGGTCTCGAACTCCTGACCTC 213
|||..||||||||||||||.||||||||..|||||.|.||| .||||||||.||||||||||||||||||||||
Sbjct 2739 GGCAGATTTTTGTATTTTTGGTAGAGACGCGGTTTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTC 2812
Query 214 AGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA------- 280
|||||.|||||||||||||||.||||||||||.||||||||.|||..||||||||||||||||||||
Sbjct 2813 AGGTGATCCGCCTGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAG 2886
Query 281 --TT---------------------------------------------------------------------- 282
||
Sbjct 2887 AGTTTTTAAAGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTAC 2960
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2961 ATTTAGCAGGCAGATCCAGAAGCACTAGTGAACTGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTT 3034
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3035 AGATTCCATTTCTTAATTGATTGGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAA 3108
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3109 AAATTATTCAAAGCTATAGTTTATACATCAGGTACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAAC 3182
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3183 AACTAAATTCACAAGAACTGTCCTGCTAAGAAGTGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACAT 3256
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3257 CTTAATGTTTAATATTTAAACTATTGGTATCATTTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTA 3330
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3331 CAGTGGTGATGCTAGTAGAAGTTTAAGCCTTGGAAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGA 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 GTAATTTATGTTTTTAAAATTCAGAATAGTTAATCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAAT 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 CATGTAAATATTTCAGTAATATAAACTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCA 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 AATAATTTACAATTCACAGAATATTTTATTTAAGGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCT 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 TAACTTTATTCATGATGCCAAAGTAAATGAGGAAAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACT 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 ACCAGTAGTCCATATTGTTTAATATTAAGTTGAATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTT 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 TGATTGTCTGAATTTTTGATACTATTTTTAAAATCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAA 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 TCCCAGCATTTTGGGAGGCCGAAGTGGGTGGATCACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTG 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 AAACCCCATCTGTACTAAAAACTACAAAAATTAGCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGG 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 GAGTCTGAGGCAGGAGAATTGCTTGAACCCTGGCGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTC 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 CAGACTGGGCGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAAT 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 TCTTAAAACCGGCCCATTGGACCTGTACAGATAAAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAA 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 AATCTTAAGTAGAAAAATAAATCTTGATGTTTTAAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCC 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 CGGCTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCA 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 GGAGTTCAAGACCAGTCTGGGCAACATGGTGAAACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGG 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 TTGCACACACTTGTAATCCCAGCTACTCAGGAGGCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGT 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 GCCAAGGGCTCACCACTGCATTCCAGCCTGCCCAACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATAT 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 ATATATATATATATGTGTGTATATATATATGTATATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGG 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 GGCAGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTG 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 AGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGG 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 CACCTGTAATCCCAGTTACTTGGGAGGCTGAGGCAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGA 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 GCTGAGATCGTGCCATTGCACTCTAGCCTGGGCAACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTT 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTT 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 CTGAGACGGAGTCTAGCTCTGCTGCCCAGGCTGGAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCT 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 CCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGC 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 GAATATTTGTTTTTTTTAGTAGAGACGGGCTTTTACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGAT 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 CTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTT 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 CAAAGTGAATTGTTTGTTGTATCGAGTCCTTAAGTATGGATATATATGTGACCCTAATTAAGAACTACCAGATT 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 GGATCAACTAATCATGTCAGCAATGTAAATAACTTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCT 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 GGCCCCTTTATAACCAGCATCTTTTTGCTTTAAAAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAAT 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 AAAAATATTTTTGTTCTAATTTGCTTTCATGAGTGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGAT 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 TTTGTTTTTTAATTTGAAGAAAATCTTTGCTATTATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTG 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 CTAATAACGTAACTTCTAAATTTGTCGTAATTGGCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGG 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 ATTCATAGACAAAGCAATGAGAAACATTAGTAAAATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAA 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 TTGTCTCTTGCATAGTTCAAGGAATGTTTTCTGAATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACA 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 TACATTTTTAAATGTGATTATCTAATTTTTACAACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTC 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 TGTATAAATATTTGAAATTCAAGTACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGT 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 GCACTGTGGCAGTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATT 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 TGCTGTTATTACACACACAGGCCTTCCTGTCTGGTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACA 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 GGATTCTGTTGTTAGTGTGGATGTTCAATGAGTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTT 6290
Query 283 ---------- 282
Sbjct 6291 TGCTTTTCTA 6300
