Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_104275.2
- Aligned Length:
- 3418
- Identities:
- 243
- Gaps:
- 3145
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTACTGGGCTGGCTGCGGTGGCGCGCGGGCGCGGCACCCGGAAGTCGGCGGCGGTGGCGGAGGCGACCTCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAACGCGTACAGGTAACCCCCTCGCTCTGCATCTGCTGCGCCCTGCAGGGTCCTGGGTGCCCAGCCAGTTCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGACAGGGTCACTCAGTGTGGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGTACAAAGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCAGGCCCGAGGGCGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCGTTTTGACGCCAGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATT 1554
Query 1 -----------------------------------------------------ATGGAGTCTTGCTCTGTCACC 21
|.|||||||||||||||||||
Sbjct 1555 GGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACC 1628
Query 22 CAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCT 95
||||||||||||||.||||.|||||||..||||||||||||||.||.|.|||.||||||||.|||||||||.|.
Sbjct 1629 CAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCC 1702
Query 96 CAGCCTCCTGAGTAGCTGGGATTACAG----GTGCCCACCA---CCACAGCTGGCTAATTTTTGTATTTTTAGT 162
|||||||||||.||||||||||||||| ||| |||||| ||| ||||||||||||.||||||||
Sbjct 1703 CAGCCTCCTGATTAGCTGGGATTACAGGCGTGTG-CCACCATGCCCA------GCTAATTTTTGTGTTTTTAGT 1769
Query 163 AGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTT 236
||||||.||||||.|||||.||||.|||.|||||||.|||||||||||.| ||||.|||.|||||||.|||.|
Sbjct 1770 AGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGT--GGTGATCCACCTGCCTCGGCCT 1841
Query 237 CCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGG---------CCATT------------------- 282
||||||||||||||||||.|||.|||||||||..||||||| |||.|
Sbjct 1842 CCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGA 1915
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1916 CTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGA 1989
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1990 GGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTC 2063
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2064 AGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTC 2137
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2138 CTGATAATAAAACTCTGAGGCTTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAG 2211
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2212 CTGCTATGTCTCCTGTGCAGCCAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTC 2285
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2286 AGCACCACATGTGGATGCCTGTGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGC 2359
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2360 GTGGGATGTGGTAGATGCTGATTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACT 2433
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2434 GGAGCGGGAGGCAGGCTGGCCTGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGC 2507
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2508 AGGTCTGCATCTGTCTCAGCCCCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGG 2581
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2582 CCGAGTATAAGGGGGTCCCGGATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAAC 2655
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2656 TTGGCCTTTTCAGACCCATGAGAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACA 2729
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2730 TGATGTGAGTCCACCTAGGGAGGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGG 2803
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2804 CTCAGAGCCTTCCATGGCTCACTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCT 2877
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2878 GAGGAGAAACTGAGGCCCCACATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTG 2951
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2952 CCCTTGCTGCCAACACATTCACCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAAC 3025
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3026 CTGGATGGTGCCCTGCCCTCATGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAA 3099
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3100 GAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTA 3173
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3174 AGGAAGAACAGCCCTCAATGGTGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTG 3247
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3248 ACCCACAGTACCTCAGAATGTGACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTC 3321
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3322 GTTAGTGTGGGCCCTAATCCAATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCT 3395
Query 283 -------------- 282
Sbjct 3396 CATGCCTATAATCC 3409
