Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_001743802.2
- Aligned Length:
- 5148
- Identities:
- 124
- Gaps:
- 5009
Alignment
Query 1 ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAA-T 147
||||| |
Sbjct 1 -------------------------------------------------------------------GCTAATT 7
Query 148 TTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTC 221
|||||||||||||||||||||.||||||.||||||||||||||||||||||.||||||||||||||||||..||
Sbjct 8 TTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTGGCCAGACTGGTCTTGAACTCCTGACCTCAGGTAATC 81
Query 222 CGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT------------- 282
|.|||||||..||.|||||||||||||.|||||.|||.|||||||||.|.|||.|||| |
Sbjct 82 CACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCGTGCCCGGCC--TGAAGACACTTCTT 153
Query 283 -------------------------------------------------------------------------- 282
Sbjct 154 TTGCAATGCATTTACCACTTTAGAAGTGGTTGCTTTCCTCTCAGAATAGGTGTGTTGGGGGAACACTCAGAATG 227
Query 283 -------------------------------------------------------------------------- 282
Sbjct 228 GGAGGGCAAGCAGGGAGTCCACTCTGTGTGCAGGGTGCAAAGCAACTTCCACATCAACTTAATACCATCAGATT 301
Query 283 -------------------------------------------------------------------------- 282
Sbjct 302 GCTCAGTAGTAGAGACATTTTATTGCTGTGATCCCATTAACTCTGACATTGCACTGTTCTATTCTTGGACACTT 375
Query 283 -------------------------------------------------------------------------- 282
Sbjct 376 TCTTACTATCGAAAGCCAGCAAAGCTTAACAGCTGCTGAGAACCACAAAATAAAAAGAAATAGCTTTGGTCTTG 449
Query 283 -------------------------------------------------------------------------- 282
Sbjct 450 TTGGATTGAATTTTTCTTTTTTTGGCCTCTTTTTCCCTTTGGGCTTCAACTATTTCCTCTACCACAAGGGCTGA 523
Query 283 -------------------------------------------------------------------------- 282
Sbjct 524 CGTCAATGCTGTCACCAGGCACATGGACCAACTGGGCTTGTCTGGGGACAGAGAGTCTGTCAAATCTTACCCAC 597
Query 283 -------------------------------------------------------------------------- 282
Sbjct 598 ACAGGGTGGGAGGTCCCACCATGGTGCAGTGAGAACAGACCAATGGAACCAGCATTTCTCTGAAAAGACAAGCA 671
Query 283 -------------------------------------------------------------------------- 282
Sbjct 672 GAGGGTTGACCCATCACATGCTCACTCCTCTGCCAGTATTGAAACTGTCCTCTCCTTTGTGTGCAGAAAGGAGG 745
Query 283 -------------------------------------------------------------------------- 282
Sbjct 746 CCAGGACCAAAAGTCACCAACAAGTGCATTGGTCAGGGTTTTCTACCTATTCCATGAAACAAACTTTCAGCCAA 819
Query 283 -------------------------------------------------------------------------- 282
Sbjct 820 TTAAATGAAAAACCTTTTAGCACATGGTTAACGTTAAATTCTCATTCAGGCCTTTGAAACTGACTGAGGTTTGG 893
Query 283 -------------------------------------------------------------------------- 282
Sbjct 894 CCATTGCTTAAATTAGATGCCAAAGTTCTGTCTCGTCTTTTCCCAAGTGGCTGGAGACAGGTTTGTGACAATGT 967
Query 283 -------------------------------------------------------------------------- 282
Sbjct 968 CCCAATTCCTCTATGACTGGAGGAGGGAGTGAGGGTGCCCATGGGCTGTTTCCCATTCTCAGGAGGGAGGAGGG 1041
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1042 TGAGTCCCTGTGCTGACTAGGGGCTGGGAAACTTGGTGACATGGTACAACCTCACTTGCCACAATTGCAGAGAA 1115
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1116 ATGTGTTGGTGGCTGGCAGTCCAAGTGCCACTGAGTTTCTCTCTCATGCCACCTTGGCTTACGGGCCATGACTT 1189
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1190 GGCCACCTCTTAAATTCTTTCTAAAATAATCAGTATGATTATGCAAAGTTTATAAAAATCAGCAAAATTCAGAC 1263
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1264 AAGGTAAAGGTAGAGAGATGAAACAGAGCTACATGTCTATGTATTAGAGAAGCTTTTGAGATTCATTATTTAGA 1337
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1338 TTCCTAATAAGAAAAACTCTATGATGGAAGGAAGGGGAAATCTTCCTATAAGTTTAGTGCCTGCTGGACAAAGT 1411
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1412 CTTTGTATGTGTACTGCCAAGCAATAGATAGAATCCCAGAACTAGAGGCTTTGAAAATACAGCCACATCTAACA 1485
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1486 GGCAAGGCCAAGCTTTGCTCTGCTCAGCACCTGCTGCCCTTCTTTCCAGGACATTCTTTCTCTTGCTCATCATG 1559
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1560 AGCCCCAGTTCCTGCCCTATGAGGAGCTACATATCCAGGCCTGATCTCACACATGCATCCTGACTTACTGACGT 1633
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1634 CTCTCTACAAGTTGACTACTCTTTTCCAAACTCACATGTCTAAAGTAGAATTATTTTCTCTGCCAATCTAGGTT 1707
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1708 CCGTTACCAGCTATCACGCTTCTTAGAATTGCCATCATTCTTCCAGCCTTCTAGGTGCAAATCCTTAGAGTCAG 1781
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1782 TCATCCTTGAATTTTCTCTCTCTTTCATCATTTGTAATCAGTCACCAAGCACTATTGAACATTGCTTGTCAAAC 1855
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1856 CTTCTCTGCATGCTCCTTCCCTACACACCCCTTGTTATAACCCTATCCATGACTAACCCTCCCACCCAAAATAC 1929
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1930 TCTTTGCTGGTTTCCCCACGACAGGAACTAACTTCCGTGCCAGAATAAGCCACCTAAGACAACAGTTGGAGAGA 2003
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2004 TCACCTTATCACATATGAGTAATGTGACTCTGAGAAAGTTATATAACATTTCTGAATCTCAGTTTTCCTCATCA 2077
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2078 ATGAGAACAACACTCATATCACTGGGATACTAGGAAACAGACATATGTGTCAAATACTTGATAAAGCCCTCTCC 2151
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2152 CAAGATGCATGCTATGATTATTTAGGGCGATATTATTTTGGCCACTGTTGCCCCCAAGTAATTTCTGGTTTCCA 2225
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2226 GTATGATTAACTAATCTGATTACATCACACAATAGTCAAAGAATTAAGCAGCTGAACAATTGCAAAGAGCTTTT 2299
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2300 CCTCAGTGGAGACACCATTGCAAAGAGCAGTAAGGGGTGAACGATAACAGGCTGCATCCCACGGTAGTGGGTAT 2373
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2374 CATATAATCTGGTCTTCAAAATGAACCTATCCTTTTTCCTCCAACCACCACTTCCCCTTTCTCTGTCATCACTG 2447
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2448 GCAATTTTCTCTCCTTTTTTTCCTCTTTCCTAACCTTTTCTATACCTCTATTTCCATGAGACAGAAAATCTTAT 2521
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2522 GTTGCCGTTTTAATGAGATCTCTGATTTTCTTTTTTTTTTTTTGAGATAGAAACACCCATTTATAATGCTTAAT 2595
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2596 TATATCACCTTTGATATTATTCATTAGTTATTTCCTCTAGCAATGTGTTATATTCCAAACCACTGAAGTCAAGA 2669
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2670 CTTAACCTTTTGTGACTGCTGCAGCTTAAGGTACACATTAGTGTTCAATGAATATGTGATTGATTTATGAAGAG 2743
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2744 CATCACGCTTGGTCATTACTAACATACTTGAGTGATGTCTGGTATGTACTCACACGTGAATATTCTTCCTATAG 2817
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2818 TTTAACTTGTGTAAGTTTTAGCTTTTCAACTAAGTGGAAAACCATTTAAAGGCAAGCATCTATCCTCTTATCAG 2891
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2892 CATTCTATCAGTGCTAGCACACAGTAGGTGTCATAGAAACTCACTACATTCCCTAAACATAATAACAATTGCTT 2965
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2966 ATGGAGCACTTACTAAATGCCAGGCACAGGAAAGTCTGTAACTACTTGGCATGAAATAGATCTTTAATTATAAC 3039
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3040 AACAGCTCTGTCATGTGGGTTTCATAATATCTAGTTATACAACAGTAAGTTGAGATCACACAGGTAGTAAATGG 3113
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3114 CAGAGCCAGGATTTAAACTCAGGCTTGCCTGACTTCAAAGAATGTGTTCATAGCCCCTCTCTGTCCCTAACTCT 3187
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3188 CATACTTCCCACTGTTTACATATTCTACAAGCGACTCTACTGAAAGGGAGCCTAGTTTTGTCTTTCACTTTTAA 3261
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3262 TACATTTTCATGGCAACTCATATTTTTAGTGAATATTTGTTCTCTAGCTAAAGATGGATCATGTATTCCTTCTG 3335
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3336 AACCTTGCCTTGTTTTGTTTTGGCCATTGATAGTTATTCTAGGCATGGTCTCTTTGACAATGAATCTCCTCAAA 3409
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3410 AGACAACACAATAAATTATGAAAAGAAGAGACTATAAATTATAAACTGAGTTAATCTGCATCTCTTAGGGAAGG 3483
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3484 AAGTTTTGGACTCTGGAAGAAGATCCTCTACATTCTCATTTTAAAACTGTACTATCTCTCATATTACGGGTGAA 3557
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3558 TTCTCAACAGGAAAGTTATTTGTGGTAGCAGGTTGTGTTTTCCAAAGATGGTCATAATGTTTCCCACCCCACAT 3631
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3632 ACTCTCCTGTAACCTTGACAATGTTCCATTAAGGAGTGTTCCCTCTGTGTTCTCTCCCTTCAATCCTGGGCAGG 3705
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3706 CTTTAATGATTGTCTTGACAAATATAGTACAGGTTGTTGTGTATCGCTAATCCCAAAATATCCAAAATCCAAAA 3779
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3780 CACTTCTGGCCCCAAGCATTTTGGATAAGGGATCCTCAACCTATGTGGTGGAAGTAAGCAGTGTGACTTCTGAA 3853
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3854 TTAGGTAACAAATATGCTATGCGCTTCTACTTTGCTCTTGCAGAATGCTCATGCTTGGAACCCTATGTCCAAGT 3927
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3928 TGTAAGGAAGCCCAAGCAGCCCATAAAGAGGCCCACGTTAAGAAGAACCAGGACCCACAGTCTAAGTGAACTCT 4001
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4002 CAGCTAATAGCACCATTTTGCCAACCATGAGTCAAACTGGCAGCTTCAAGGACCTTGGCTGAAATTGGTCCATT 4075
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4076 TGGATATGTGTGCTTGTTTCTGCAATGTCCTGAATGACTGTGGGAAAGGGCTTCACAAGGCTTCATAAGACACC 4149
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4150 TGGATCTCATATCTGCTTCTGCATTCAATCTGTTGCACCAAGTTGTTTTGACTGAAGGGTATGAAGAAAAACTG 4223
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4224 GCCTCATCCAAATATGCGGTTGGAAAAGGGTGGAGTATTTTAACAGCCCTTCAAATAATTGGTCCCAGTGATCA 4297
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4298 AGCTTTGTCTCCAGCATCATTTTACCCTTTATTCTTGGAAGGGACACTGGAGGCGACTGATTCCAACCCCTCGA 4371
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4372 CTTGAAAGTTGAAAGATGCAAAGCACAGAGCAGGGGATGACATGCTCAAGGCCCCATCACCAGTCGGAGGCAGA 4445
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4446 CCTGCATAGAACTTGGGACATAAATGTAGGCACACACAAAACCCAGAGACATTCCACCGACATTTAAAATCAAG 4519
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4520 AATCCTCCCTGATATAGTATGACCTTGTAAATGATGCAAAGGGTTTGAACAATTCAAAACAAACAAACAAACAA 4593
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4594 AAAAACAGGTCTAGGATAAGTTTTTTCAAAATCATCAAATATAAATTTCAACCCAATTTTTTAATTTCATAAAA 4667
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4668 CCAAGGTTAAAAGAGGTTGAGTGATTAGTTAAAAGTTATGGGCAAGTGATGGTAACGTCAAGCCTCTAATTCAT 4741
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4742 ATATTTGCCAAGCTCTAGCTTTGAATGATATTGTAACTCGAAAGGAATAATGTTGTTCTTTTTAGAAAATAACA 4815
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4816 TGGTCATGGTAGACCACTTGGAAAAATATACATAAACATAAGGACAAAGTGACCCATACATTAAAGATAATCAC 4889
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4890 TGTTAATATTTTTATTAAATGAAAAGCATTACATGTAACTTTACCTAAGTTTATCAGAAAAAAAGAATTAAAGA 4963
Query 283 ------------------------------------------ 282
Sbjct 4964 GGGTCGGTATGGTGGTTCACGCCTATAATCCCAGCACTCTGG 5005
