Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_002957765.1
- Aligned Length:
- 4993
- Identities:
- 243
- Gaps:
- 4715
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAGAGGACGTGGGCGCCCGCCGAAGTACGTGTGCGCGCGCGCGTTTGCAGGAAAACGTGCATGGATTTCTTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGTGGCAGAGAAGGCGCCTAGGCGCTGTCCGTAGTGCTGAAATGGTGCGTGGTGAGACCTGTCTCCCCAACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCTAGAAGACAACAAAATAGCAGCCAGGAAACGCTCTGATAAAGCTCTAGATAGCTGCCAGGTGATGCCAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATTACTAGTTTTGGGACCAATTAAAGTAGCAAGATGCAGCCAGGAGTGGTGGCTTATGCCTGTAATCCCAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGGGAGGCCGAGGTAGGAGGATCACCTGAGGCCGAGCTCAAGGGAGCAGAACTAAGTTACATGATTCTGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGATGTATAAGCACCACTCCAATAATTTATTATCACGGTTGGAGACTTTGACTTGTCACTTTATGACTTGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATATGGCTCCATGGTAAATGCCCATAAAGCTGATTTTTAAAATCTGGATATTACAGTTCTAATTCTCACTTAGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTAAAAGGTAGAATAGGCTTCTTGTTTCATAGATCATTTGTGTGAATGTTGATTTGTTATGTCATTGACATCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACACACATGCTTACATTTTGAAGGTTGCTAGCGTTTCCCATTAATGCTTCTGAATTGATGCCAAAGGAAAGCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGATTATAAATTAGGTTCCTTGGTATTAGTTGGTGCATGACCCTGACCCTTTTCAAGCTATATGAAAGGTAATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGCTCTCAAAAGCCTGCAAAATGGCTTATTCAGGAAAGCATAATGGATTAAAAATCCATTAGGTTCCACTTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTGCTAGATGCTGAGATACAAAGATAAATGAGATTTGGTCTCTGCCCTCGAGGAGATACGTGGCAAAATAATA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGTAAGTTCTACAAAGTTCTATACAAACACAGATTAATATGCTATTCATGTTTTATTAGCCATTGCCAAAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGATGAAGAACTGCAAAAAGATAAAACACAGAATACTTGTACTTCAGGTCCTTGCCAATATCTACTGCCCAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTTACAAAAAAAATTGCTGAAAGGCATGAAATATATGAATGCCTTTCTAAAGCACATGTGGATAATCTATACT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTGGAGCATCTATGATTTATTTTCAGAACAATCCAAGTTATTAGAAAGGTAAATATGTTGGTGACATTGTTTA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAAGTTCCTCAAGCAGAATTGCCTTTACTATGCTTTGACATTATGCTCTCAGCTTATATACAGTAATTCTATGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAAACAGTAGCCAGCTTACACAACCTGCTCTATATCTACTACAGAGCTGTTACTAAAGTGTTGGTCAACATATA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTTACTATTTCTTATATAAAGATGCCCAAGAAATTTAGATTTCATAGATATATCCCCAAAAGCATTTCTTTCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATACCAGTTTAATGAATTGAACTTTCATACCTCACTTAAATCAACCCAGGGTAAAGTGGTATGTTCTGTTCTTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACACAATGAAAATCATGTAACTAATTAAAGTTAGCATTTATTTTAGCTACTAGGGATGCCAGAGTCAAATTAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGCTGAAAATGAATAACTACATAAGACCTTAAGCCTTTTATATCTTTTCTTTTTTTTTAATCACCTTAACTAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCAATTTTGGTTTCTTAGGTAATGATAATATTATTTTCTTTTAATTATTTGTTTTAATGTGTGACCTCATGTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AATGTCCTCATAAAATCAGAAGTGGAGTAAATAAATAAATAAAGTAAATTTCTCTACTTTTTGATTATTGGGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGTGTATATGGTTGTTTTATAAATTTATTCTAAATAGGATACTAAAATACAGAAAATGTATCATCTAATTAGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATGAAGATAAAAATCTAAACTATAATGAGGAAATATTAAAATGTCAAGATGACGAAGAAATTTTTCAGTTTATA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAATTATAGATCAGCTTAATTTCAAACCACTTTGTTACCCTATTGCTATTTTTATACTCTAAATAGTGTCCCTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATATGACTAAGACTTTTTGTTATCTCAGAGATTGGAAGTGTTAATTGTCCACCTTGTTAGAAGACATGGTAACT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATAGGAATTTAGAAAGCATGATAGCCCAACTGTAATGAATATATTCTAGAATGAGGTTGTCACAAAGAAACTGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAACAAGAATTTCCTCTAACAACTGAGCTCAGGATTCTTTTCAGAGGAAAATTTAGCTTGCATAAATTCTTGCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATCTTGGCTCTAGTTGACTTCTTGCTCTCAACTTTTGCAAAGTGAGATCACCTTTACCTCTTCAACCTATGAGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCAACATGTTACTTTCAATTTTTCAGGAAAATCTACGTCTTGTTTGGCTGAGGTTTGATTATTATTCCTTAACT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAAATATTTTAATGTAGCTGTGCTTTTTAATTTGAATATTGCTATTGATTCAAACATTGGGTAGCATATCTTTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAATGTGAAATTTTAAAACATGTATTAAAGACAAACATAAATTAGTTTTGGTATAACTATTTTTTAAGATTAAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCAATGCTTTTTTGGCTTTAGATGATGTTTGGTAATTAGCTATATTCAAAAGTCAACCTTTTTTTTTTTTCAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAATGAACTCCTATGTATATGAGTGTTATTTTTATCTACCCATGTCTTTTTTGTCTACATATACAGTTTTAATC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTGTTTCGGGGGGAGGAATAAGAATGATTTTGAAATTTCACTAAGAAAGATATGCCCTCTTCCTAAAAATACA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TATATACAGATGTTTTGCTCACAGCTCAGGTATTCATGGATCTCTGGAAGTTCATTTTTATAATCCCAAGGTAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCCAAAGAGCCTGCTAAAAAATTCTGCTGTAAATGCATGGTACATGATCTCATTCCCTGTTTTACAACGAAGTA 2886
Query 1 ----------------------------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTG 28
|||||||||..||||||.||||||||||
Sbjct 2887 TTGAATGGCTTAAACTCCTACTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCCCTCTGTTACCCAGGCTG 2960
Query 29 GAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTC 102
|||||||.||||.|||||||..|||||||||||||||||.|.|..|||||||||||||||||||.||||||||.
Sbjct 2961 GAGTGCAGTGGCTCGATCTCTGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTT 3034
Query 103 CTGAGTAGCTGGGATTACAGGTGCCCA--CCACCACAGCTGGCTAA-----------TTTTTGTATTTTTAGTA 163
|||||||.||||||||||| .||.|| |||.||...|||||||| |||||||||||||||||
Sbjct 3035 CTGAGTAACTGGGATTACA--AGCACATGCCATCAGGCCTGGCTAATTTTTATTTTTTTTTTGTATTTTTAGTA 3106
Query 164 GAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTC 237
.|..|.||||||.|.|||.||||.|||.||||||||||||||||||||||| ||.||||||||||||||||||
Sbjct 3107 CAATCAGGGTTTCAGCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCA--TGATCCGCCTGCCTTGGCTTC 3178
Query 238 CCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCC-----------ATT------------------ 282
|||||.|||||||||||.|||.||||||||..|||||||||| |||
Sbjct 3179 CCAAAATGCTGGGATTACAGGCGTGAGCCAACGCGCCTGGCCAACTCCTACATATTTTAAAGCCACCCCATTAG 3252
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3253 TTTTCTATTTTTTTCCCCTTGGAGATCTTCCTTTAGGTCATTTTTACCATCTGATATCTCAAAACTAAGCCAAG 3326
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3327 GCTGAATGTGCTGAAATAGGATTAGAGAGTACAGTAATAGGATAATTAGATTTGATTAGAAAATGACTGTGTGG 3400
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3401 GATTTTGTCAACAGTGAAGAAATGATCTAAGTATGTGGACTCCTAAGTGAATTGAGCATGATGACACTTTAGTG 3474
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3475 TAGTTAATGATCTAATGCTGGTCTGGTTGATGAGTCCCATTGAAAATGAGATGCTCTGTTTTCTGGTAAACTTT 3548
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3549 TCTGCAAAGAAAAATGTACTAAATGTTTCAGTTCAGAGTGTTCTATTTAAATGAAATTTCATTTAATTGCTTTT 3622
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3623 AGTTTTACTGCCCATAAGCCTTCAGTTGTTTCATTTAAAGTGTACTTTAAGCCCTCCACTATATTCACTGTTGA 3696
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3697 ATCTAATGAGTATGAGAGGGTACCTTGGGCACAATCTCCACGAATGTATGAGCCATAACTACAGTATAGTATAT 3770
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3771 AGAGATTAGCTTAAGTTATTTTGCTCTGCTAAAGATAGAGAAACAAGAGCAGTTTTCTAACATAATGTATGCTT 3844
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3845 CTGTAATAGGACTCAGTTAAAAAATAATTGGCAAATAGGAATGTCAATGAAATGTGGAAATCAATTGTTTTATA 3918
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3919 CATGATTTTCCCCAATACGTTAATGTTTTGACTACCAAGTAAAAGCAGTTGCACTCTAAGTCCACTAACACAGC 3992
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3993 TGAAGGTAGTAAGCTGTGGAGGAAAGTAGTCCTATATATAACACCCATTCACTCCTCCTTTTTCCTCTTGGCTT 4066
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4067 AATTTCACCATACGATCTGTCTTGAAAATGCTTATTGCACAATTCTTCCTGATCTTTGTGCATTTGTCCTTGTT 4140
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4141 TTTGTAACTCAACCTTTGGTTTATTTATTCCATCATTCTTTCCTAACTCAAACAAATTTGTGAAGTTCTAAATG 4214
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4215 TATTGAAATATATGTCGTAACTTTTATTTTTAATTGTGCTAGCATTTTCTTAGCTTTGTAAATGTTTTTTGCAG 4288
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4289 TGCTATGGTTGTGATGTTATGTAAGTTTTACACTTTTTTCTCCAACATAATTTTTTCCCGAAATATTGCCAGTT 4362
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4363 ATTTTTGTTATTGAATAGACTTAATTTTCTTAGAGCAGTTTCAGGATTACAGAAAAGTCAGAGAGTACAGAAAG 4436
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4437 TTCCCATATATCTCCCATCCCTTTTCTCACAGTTTCACTTGTTATTAACATCTTACATTAGTGTGGTACATTTG 4510
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4511 TTAACAATTGATAAAACAATTTTGTTACATTATTATTAAGTACACAGTTTACACTAGAGTTTATTCTTTTTGTT 4584
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4585 GGTCAGTTCTATGAGTTTTGAATAGTGTATAATGTCATATATTCACCATTATATTGTCATGCAGAATAGTTTCA 4658
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4659 CATTTCTGAATATCCCCTATTTATCCCTTCCTCTTCCCCTCACAAACCCCTGGAATCCATTGATCTGAAACTGT 4732
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4733 CTTGCAGTTTTCTCTTTTCCAGAATGTATGTATAGAGTCATACAGACTCTGTTGCCCTTTCAAACTGGCTTCTT 4806
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4807 TCATTTAACAACACGCATGTAAGCATCCTTCATGACTTTTCATGGCTTGATAGCTCATTTATTTTTTATTGTTC 4880
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4881 AATAATATTTCATTGTATGGATATGCCACAGTTTATTTATCTATATATCTGTTGAAAGATATCTCGGTTACTTC 4954
Query 283 ----------------------------------- 282
Sbjct 4955 CAATTTTTGGCAATTATGAATAAAGATACTATAAA 4989
