Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_002958675.1
- Aligned Length:
- 4306
- Identities:
- 245
- Gaps:
- 4029
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCATCCTATGAATTGGGTCATTCATGTCCTACCCAGCTAAAACAGAGGCCAGGAGCCAGGGAGGAAAAGCAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGCCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGACTGTGCATTGTACCCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACCAGCTTTATCCATAGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAATAGAACCTCCCAGCTCCCAGCCCTTCCTAGTGCCCATGGGCTTTACATAGGGCAAGAGAACATTTCTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTATAATTGCCATCTCTTTGCTCTCTCAACATGGTGAACACCATCCGGACTCCGTGTATGTCTCAAATTACAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTTTCTTTGCAAATGAAATATGAAATTTAGAGGCTCTTCTAAACACTTTAAATTTGATTTGACATTTTCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCAGATGTAAGTTTTAGAGAATGAGATTCTCCATAAAAATGACCCTTTCATGCTGTGGCCTCCATAGAAGATGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCAGGCCAGGTGCCCACATGGCAGGCATTTATTTTCTCACAGATCTGGAAGCTGCAGGTCCAACTTCGAGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGTGGGGTTGTTTCCTCTGAGGCCGCTCCTTCTGGCTGGCAGGGAGTCTCTTCCAGCCGTGTCCTCTGTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTTCCTCTATGCACACGCACCTCTGGGATCTCTCTGCCTCCAAATATCATCTTTTTTTTTTTTTTTTTTTTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGAGACAGAGTGTTGCTCCTCTTGTCCAGGCTGGAATGCAATGGCACAATCTGGACTCACTGCAACCTCCGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCGAGTTTAAGCGATTCTTCTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAGTTTTAGTAGAGATGGGGTCTCACCATGTTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCTCAGCCTCTCCAAGTGCTGGGATTACAGGCATCAGCCACTATGCCCGGCTGGGATCATATGTTCCACACAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTTGTTCAATAAGCATGGACTGCAACCACCTACATGAATATTCATAGCTCCTCCTGTAGCCTGTTGAATATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGTTTAGCCAACCTCTTCAGCATAAAGCTCCTGCCCAAACCCCTCCTGCTCCTAAATGTCTGTCTCTGGTGTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCAGAGGCTGCTCTTCCCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTTTGCAAATGCATCCCTTGTGTAATTTGTAGGTCACCGCGCCATGGGAACACGCTACCATGGGAAGGGAGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTGAGACGCGCAGGGAGGCTCCAGACAGGCTGGCCTGGGACACCAGCCGCTGCCCTTCCATAACATGGGGACAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGAGGGCAAAAGTTCAGCCCAACACGGAGGATCTTCGGGCAGGAGATGGGGAAGAAGGAGAAGCAGGAAGGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAGCTCAGTGTGGGGGCGCGCATGGCATCCCGGTGGGACATCTGAGGCCCACACCCACCTGCTGTCCCTCCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCACGGTGGCCACCGAGGGTGAAGGCCTGGGGGGAGGCAGACGCCTGGCCCTTTACTCTCCCTCCCTGTCCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGGCCGCTGGGTGGGGGCCGTCTCTGGGATGATCCCCGAGGGCAGGATCCGGGAGTCCCTGCAGAGGCATCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGTCTGTCTTGATGGTGGAGTGGCGGCTCCAGCTGGGCGGGACCACCAGGGGAGGGGCTTGTGCTCTGCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCAGCCTGGTGTGGACCCACCTCCCGGGCGCTGGCTGCAATGACTTTCTCTTTCCCTTTGCAATTGCCTTGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCTGCCGCACAGAGCGGCCTGTCTTTATCAGAGGTCCCTCTGCCAGGGGGAGGGCCCCAGAGAAAACCAGAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGGGTGAGAGACTGAGGAAGATAAAGCGTCCCAGGGCCTCCTACACCAGCGCCTGAGCAGGAAGGGGGAGGGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCATGACTACGAGGCCCTGGGAGGTCACTTTAGGGAGGGCTGTCCTGAAACCTGGAGCCTGGAGCAGAAAGTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AACCCTGGTGCTCCAGACAAAGATCTTAGTCGGGACTAGCCGGCCAAGGATGAAGCCTCACTTCAGAAACACAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACCCATCCTTTCTCGTCGGAATACCGTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGCTGTGCTACGAAGTGAAAACAAAGGGTCCCTCAAGGCCCCGTTTGGACGCAAAGATCTTTCGAGGCCAGGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTATTCCCAGCCTGAGCACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTACA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGCGCTCTGCAGGCTGAGTCAGGCAGGGGCCCGCGTGAAGATTATGGACGATGAAGAATTTGCATACTGCTGGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAAACTTTGTGTACAGTGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATTCCTGCAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CGCACGCTAAAGGAGATTCTCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTACT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACTTCTGGGATACAGATTACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGCCTCCGTGGAGATCATGGGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TACAAAGATTTTAAATATTGTTGGGAAAACTTTGTGTACAATGATGATGAGCCATTCAAGCCTTGGAAAGGACT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAAATACAACTTTCTATTCCTGGACAGCAAGCTGCAGGAGATTCTCGAGTGAGGGGTCTCCCCGGGCCTCATGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCTGTCTCCTCTAGCCTCCTGCTCATGTTGTGCAGGCCTCCCCTCCATCCTGGACCAGCTGTGCTTTTGCCTGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCATCCTGAGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCTCCCCTGCCTCACCACCTCCTCTCCGCTCTCC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAGGCTCTTCCTGCAGAGGCCTCTTTCTGCCTCCATGGCTATCCATCCACCCACCAAGACCCTGTTCCCTGAGC 3330
Query 1 --------------------------------------------------------------------ATGGAG 6
|.|||.
Sbjct 3331 CTGCATGCCCCTAACCTGCCTTTTCCCATCTCCCCAGCATAACCTAATATTTTTTTTTTTTTTTTGAGACGGAA 3404
Query 7 TCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAA 80
|.|.||||||||||||||.|||||||||||||||..|||||...||||||||||.||||||.||||||||||||
Sbjct 3405 TTTCGCTCTGTCACCCAGACTGGAGTGCAATGGCTTGATCTTGGCTCACTGCAAACTCTGCCTACCAGGTTCAA 3478
Query 81 GCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGC---CCACCAC-CACAGCTGGCTAA---- 146
||||||||||||.|||.||||||.||||||||||.|||||||..|| ||||||| |||| |||||
Sbjct 3479 GCGATTCTCCTGCCTCCGCCTCCCGAGTAGCTGGAATTACAGACGCCTGCCACCACGCACA----GCTAACTTT 3548
Query 147 -----TTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAG 215
||||||||||||||||||.||||||||||.|||||.||||||||.|||||||.||||||||||||||||
Sbjct 3549 TTTTTTTTTTGTATTTTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAG 3622
Query 216 GTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGC--CA------- 280
|||.|||||||..||..||.|||||||||||||||||||.|||.||||||||||| |||.||| ||
Sbjct 3623 GTGATCCGCCTATCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTG-GCCCGGCGGCACAACCAA 3695
Query 281 ---TT--------------------------------------------------------------------- 282
||
Sbjct 3696 ATCTTATTAAACTCACCCTAGGCTGGCCGCGGTGACTCATGCCTATAATCCCCCAGCAATTTGGGAGGCAGAGG 3769
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3770 TGAGAGAATCGCTTGAGCCCAGGAATTCGAGACCAGCCTGGGCCACATGACAAAGCCCCATCTCTACAAAAAAA 3843
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3844 TTACAAAAAAAAAAAAAACAGGTGTGGTGGCATGCACCTGTAGTTGAAGCTACTTGGAAGGATGAAGTGGGAGG 3917
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3918 ATTGCTTGAGCCGGGGAGGTGGAGGCTGCAGTGAACTGAGATCACGTCACTGAACTCCAGTCTGAGCAACAGAT 3991
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3992 CGAGACCCTGCCTGAAAATAAATCAATAAATAAACTCAACCGAAATGGGTATGAAAGTTGAAATGGGTATGTAA 4065
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4066 GTTGAAAACCAGAAGTTTTGAGAAACATCCTTTGTTAACTTTCATCCTACAAATTGGGTCATTCATGTCCTACG 4139
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4140 CAGCTAAAACAGAGCCCAGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTC 4213
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4214 TCTGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAAATGG 4287
Query 283 -------------- 282
Sbjct 4288 CTGTAAGTCTTGGA 4301
