Nucleotide Global Alignment

Description

Query:
TRCN0000469746
Subject:
XR_242802.3
Aligned Length:
4475
Identities:
246
Gaps:
4194

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GACGCCGCGCACGCGCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCTGCTCGTGGCCAGCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGCCTTCAACCTGCAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGCTGGGTGCAAGACTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGAACCCATCTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGTGCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCTGACAGGGGGCCTGGGCCTGTCTCAGGAGCCCCCACCCCGCTCCCGCAGCCCTCTGTGTGTGAGCTCGTCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAGCCTCGAGGGTGCCCCCTGCACTTACAGAAGATGGGGTGGGGGGCTTCCCTGCTGCAGCCTGGGGGAGAAGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTCCTGGGCCCTGGGTTCTATAGACCCCCATGGCACTGACTCAGACCCAGACAGGCTGACCTACTGCTGACCCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGGAGCCCGCCTGGAGTTCGAGGCTCTCAGTGGGTGAGGTGGACATTGCCTGAGGTTGGTGCCCTCGGTCCTCC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCAGCAAGCGAGCCTGACGCTGTCCACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCTCCAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGTCCCGGCCGTGCAGAACCTGCTCTTCCTCTGTGGCAGCCGGTGAGGGCACCAGGGTGGGCACATTCCTGCCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CATCAGAGCTGCACCCGGTGCTTTTGCCCAAGCTTTGACCACACGTCTGTCCTGCAGGAAATGAACCTGCTGGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TAGATGCACCCCCTGAGACAGCCCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCCTCCTGACAAGGGCCCTGGATGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGAATCAGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCTGAGGGGGTGTCGGCTCTCCTGGAGGGTCCAAACCCCCATCCTCCTGCATGTTCTCTGGTAGGAGGCAGAGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAAGACCCCACGTGCCTGGAGAGCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GAGGACTGGTTGTCACGTGTGGTCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGCTGTGGCCTGTCTGCCACCCACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAGCTGGCTCAGAACTTTGGCCAAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCACTGGCAGCACTTTCCTGTTGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACCCTGTCCTAAGCATTGAGAGGCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CTGTCCCCCACGGCCTTGCACAGTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GCACCTGGCCTGGGCTGTGGCCCTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GCCCTCTACTTCCTCACAGTTCCCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ACAGCCGTTCCCAAGCACCAGCGTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GTTCAGTTGGGCCGGGCGCAGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTAGCCTGGCATGGTGGTGGGTGTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GGGAGGCAGAGCTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CAAAAAAAAAACGTTCAGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GGTGGATCATCTGAAGTCAGGAGTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GGTGTGGTGTCAGGCGCCTGTATTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGAAGTTGCAGTGAGCCAAGATTGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AAAAATAATAAAATAAAGCCGTTCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACAT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCCCGCCCTGAAGGCTGCGTCCCTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CCTTGCTCTGTCCCGGGTCCACTCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTAT  2738

Query    1  ------------ATGGAGTCTTG-CTCT-GTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAA  60
                        ||||||| ||| |||| ||||||||||||||||||||.||||.|.||||...||||||||||
Sbjct 2739  TTATTTTTTGAGATGGAGT-TTGTCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAA  2811

Query   61  CCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACC  134
            ||||||..|.||.|||||||||||||||||||.||||||||||.|||||||||||||||||||||..|.|||||
Sbjct 2812  CCTCTGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACC  2885

Query  135  ACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTG  208
            ||..|||||||||||||||||||||.||||||||.|.||||.|||||.||||||||.|||||||||||||||||
Sbjct 2886  ACGCCTGGCTAATTTTTGTATTTTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG  2959

Query  209  ACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGC--CA  280
            ||||||.|||.|||.||.||||.|||.||||||||||.|.||||||.|||.|||||||||||||||.|||  .|
Sbjct 2960  ACCTCAAGTGATCCTCCCGCCTCGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGTAA  3033

Query  281  TT------------------------------------------------------------------------  282
            ||                                                                        
Sbjct 3034  TTTTTGTTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCC  3107

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3108  ATCTTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTTAT  3181

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3182  TTTTATTTTATTTTTTGGATGGAGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCACT  3255

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3256  GCAGCCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCACAC  3329

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3330  CACCACACCCAGCTAATTTTTGTATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAGGC  3403

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3404  TGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCTGAGGCAGGTGG  3477

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3478  ATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAGAAA  3551

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3552  TTAGCCGGGCGCGGTGGTGGGCGCCTGTAATCCCATTTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCC  3625

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3626  AGGAGGCGGAGGTTGCAGTGAGCTGACATCGTGCCACTGCACTCTAGTCTGGGTGACAGAGCAAGACTCCATCT  3699

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3700  CAAAAAAAAAAAAAAAGAAAATATTGTAAACCTAGTGGCTTATAAACAACAGAAATCAGTTTCAGTTTTGGAGG  3773

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3774  CTGGAAGCCCAAGATGAAAGCACCAGTAGATGCAACCTCTTTTGTGAGGGTGATGGTCCCATGATGAGGCTGTG  3847

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3848  CCCCTGCCCTGTGACCGGATGACCTCCCAAATGCCCCACCTAATACCATCCCCTTGCAGGTGAGGACTTAAGCA  3921

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3922  GGTGGGTTTTGGGGGGACGTGCTCAGGCCACAGCAGGGTGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCTCT  3995

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3996  GGTCAGCCAGATCTGACATTGAGCCCAGCATTGAAGATCAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGTTC  4069

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 4070  TGACGCGGGGCCCCACAGACCTGTCTCCGCGTGAGCTGCCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTGCG  4143

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 4144  AGGCCTCTGGCTTGGAGAGCCTCCCCGCTGTGCACAGTTCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCACCA  4217

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 4218  GGCTGGGGCAGAGGAGGAAAGCAAGAGGACAGACCTCCAGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCCAT  4291

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 4292  ATACCAGTGTGTGTTCATCTACCCATGAGGAATAAAACCATGCAGCAGCATGCAAATGGTGTCCTGGTGTTCGC  4365

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 4366  AGCAGAACTGCTCATGGTAATGGATAAGTTGTTTTCATACAGTGGGTTGTCAATATGTTTAATAATTGTTGGTA  4439

Query  283  -----------------------------------  282
                                               
Sbjct 4440  TCTATTAATAAGGGCAATATATTCATATGGTGGAT  4474

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