Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_242802.3
- Aligned Length:
- 4475
- Identities:
- 246
- Gaps:
- 4194
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GACGCCGCGCACGCGCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTGCTCGTGGCCAGCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCCTTCAACCTGCAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCTGGGTGCAAGACTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGAACCCATCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGTGCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCTGACAGGGGGCCTGGGCCTGTCTCAGGAGCCCCCACCCCGCTCCCGCAGCCCTCTGTGTGTGAGCTCGTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCCTCGAGGGTGCCCCCTGCACTTACAGAAGATGGGGTGGGGGGCTTCCCTGCTGCAGCCTGGGGGAGAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCCTGGGCCCTGGGTTCTATAGACCCCCATGGCACTGACTCAGACCCAGACAGGCTGACCTACTGCTGACCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGAGCCCGCCTGGAGTTCGAGGCTCTCAGTGGGTGAGGTGGACATTGCCTGAGGTTGGTGCCCTCGGTCCTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAGCAAGCGAGCCTGACGCTGTCCACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCTCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTCCCGGCCGTGCAGAACCTGCTCTTCCTCTGTGGCAGCCGGTGAGGGCACCAGGGTGGGCACATTCCTGCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATCAGAGCTGCACCCGGTGCTTTTGCCCAAGCTTTGACCACACGTCTGTCCTGCAGGAAATGAACCTGCTGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAGATGCACCCCCTGAGACAGCCCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCTCCTGACAAGGGCCCTGGATGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGAATCAGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTGAGGGGGTGTCGGCTCTCCTGGAGGGTCCAAACCCCCATCCTCCTGCATGTTCTCTGGTAGGAGGCAGAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAGACCCCACGTGCCTGGAGAGCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGGACTGGTTGTCACGTGTGGTCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCTGTGGCCTGTCTGCCACCCACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGCTGGCTCAGAACTTTGGCCAAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCACTGGCAGCACTTTCCTGTTGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACCCTGTCCTAAGCATTGAGAGGCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGTCCCCCACGGCCTTGCACAGTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCACCTGGCCTGGGCTGTGGCCCTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCCCTCTACTTCCTCACAGTTCCCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACAGCCGTTCCCAAGCACCAGCGTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTTCAGTTGGGCCGGGCGCAGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTAGCCTGGCATGGTGGTGGGTGTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGGAGGCAGAGCTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAAAAAAAAAACGTTCAGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGTGGATCATCTGAAGTCAGGAGTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGTGTGGTGTCAGGCGCCTGTATTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGAAGTTGCAGTGAGCCAAGATTGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAAAATAATAAAATAAAGCCGTTCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCCCGCCCTGAAGGCTGCGTCCCTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCTTGCTCTGTCCCGGGTCCACTCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTAT 2738
Query 1 ------------ATGGAGTCTTG-CTCT-GTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAA 60
||||||| ||| |||| ||||||||||||||||||||.||||.|.||||...||||||||||
Sbjct 2739 TTATTTTTTGAGATGGAGT-TTGTCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAA 2811
Query 61 CCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACC 134
||||||..|.||.|||||||||||||||||||.||||||||||.|||||||||||||||||||||..|.|||||
Sbjct 2812 CCTCTGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACC 2885
Query 135 ACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTG 208
||..|||||||||||||||||||||.||||||||.|.||||.|||||.||||||||.|||||||||||||||||
Sbjct 2886 ACGCCTGGCTAATTTTTGTATTTTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG 2959
Query 209 ACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGC--CA 280
||||||.|||.|||.||.||||.|||.||||||||||.|.||||||.|||.|||||||||||||||.||| .|
Sbjct 2960 ACCTCAAGTGATCCTCCCGCCTCGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGTAA 3033
Query 281 TT------------------------------------------------------------------------ 282
||
Sbjct 3034 TTTTTGTTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCC 3107
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3108 ATCTTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTTAT 3181
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3182 TTTTATTTTATTTTTTGGATGGAGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCACT 3255
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3256 GCAGCCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCACAC 3329
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3330 CACCACACCCAGCTAATTTTTGTATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAGGC 3403
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3404 TGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCTGAGGCAGGTGG 3477
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3478 ATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAGAAA 3551
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3552 TTAGCCGGGCGCGGTGGTGGGCGCCTGTAATCCCATTTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCC 3625
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3626 AGGAGGCGGAGGTTGCAGTGAGCTGACATCGTGCCACTGCACTCTAGTCTGGGTGACAGAGCAAGACTCCATCT 3699
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3700 CAAAAAAAAAAAAAAAGAAAATATTGTAAACCTAGTGGCTTATAAACAACAGAAATCAGTTTCAGTTTTGGAGG 3773
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3774 CTGGAAGCCCAAGATGAAAGCACCAGTAGATGCAACCTCTTTTGTGAGGGTGATGGTCCCATGATGAGGCTGTG 3847
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3848 CCCCTGCCCTGTGACCGGATGACCTCCCAAATGCCCCACCTAATACCATCCCCTTGCAGGTGAGGACTTAAGCA 3921
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3922 GGTGGGTTTTGGGGGGACGTGCTCAGGCCACAGCAGGGTGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCTCT 3995
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3996 GGTCAGCCAGATCTGACATTGAGCCCAGCATTGAAGATCAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGTTC 4069
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4070 TGACGCGGGGCCCCACAGACCTGTCTCCGCGTGAGCTGCCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTGCG 4143
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4144 AGGCCTCTGGCTTGGAGAGCCTCCCCGCTGTGCACAGTTCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCACCA 4217
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4218 GGCTGGGGCAGAGGAGGAAAGCAAGAGGACAGACCTCCAGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCCAT 4291
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4292 ATACCAGTGTGTGTTCATCTACCCATGAGGAATAAAACCATGCAGCAGCATGCAAATGGTGTCCTGGTGTTCGC 4365
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4366 AGCAGAACTGCTCATGGTAATGGATAAGTTGTTTTCATACAGTGGGTTGTCAATATGTTTAATAATTGTTGGTA 4439
Query 283 ----------------------------------- 282
Sbjct 4440 TCTATTAATAAGGGCAATATATTCATATGGTGGAT 4474
