Nucleotide Global Alignment

Description

• Query: TRCN0000469754
• Subject: XM_005273255.2
• Aligned Length: 800
• Identities: 569
• Gaps: 166

Alignment

Query   1  ATGTTTTTTTGGTGTGCGTGCTGTCTTATGGTTGCGTGGCGAGTTTCTGCTTCAGATGAGCACTGTCCAGAGCT  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGTTTTTTTGGTGTGCGTGCTGTCTTATGGTTGCGTGGCGAGTTTCTGCTTCAGATGAGCACTGTCCAGAGCT  74

Query  75  TCCTCCAGTGGACAATAGCATATTTGTCGCAAAGGAGGTGGAAGGACAGATTCTGGGGACTTACGTTTGTATCA  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  TCCTCCAGTGGACAATAGCATATTTGTCGCAAAGGAGGTGGAAGGACAGATTCTGGGGACTTACGTTTGTATCA  148

Query 149  AGGGCTACCACCTGGTAGGAAAGAAGACCCTTTTTTGCAATGCCTCTAAGGAGTGGGATAACACCACTACTGAG  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  AGGGCTACCACCTGGTAGGAAAGAAGACCCTTTTTTGCAATGCCTCTAAGGAGTGGGATAACACCACTACTGAG  222

Query 223  TGCCGCTTGGGCCACTGTCCTGATCCTGTGCTGGTGAATGGAGAGTTCAGTTCTTCAGGGCCTGTGAATGTAAG  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  TGCCGCTTGGGCCACTGTCCTGATCCTGTGCTGGTGAATGGAGAGTTCAGTTCTTCAGGGCCTGTGAATGTAAG  296

Query 297  TGACAAAATCACGTTTATGTGCAATGACCACTACATCCTCAAGGGCAGCAATCGGAGCCAGTGTCTAGAGGACC  370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297  TGACAAAATCACGTTTATGTGCAATGACCACTACATCCTCAAGGGCAGCAATCGGAGCCAGTGTCTAGAGGACC  370

Query 371  ACACCTGGGCACCTCCCTTTCCCATCTGCAAAAGT-----AGGGACT-GTGACCCT----CCTGGGAATCCAGT  434
           |||||||||||||||||||||||||||||||||||     |..|||| ||   |||    |||     ||||| 
Sbjct 371  ACACCTGGGCACCTCCCTTTCCCATCTGCAAAAGTATTCCACAGACTCGT---CCTCTTCCCT-----TCCAG-  435

Query 435  TCATGGCTATTTTGAAGGAAATAACTTCACCTTAGGATCCACCATTAGTTATTACTGTGAAGACAG-GTACTAC  507
           .||||                    |||         |||.|.|||..|| ||.||.|..|||||| ||..|.|
Sbjct 436  CCATG--------------------TTC---------TCCCCTATTTCTT-TTTCTTTTGAGACAGAGTCTTGC  479

Query 508  TTAGT---------GGGCGTGCAGGAGCAGCAATGCGTTGATGGGGAGTGGAGCAGTGCA--------CTTCCA  564
           |..||         .||.||||||..|||| |||            ..|||..||.||||        ||.|||
Sbjct 480  TCTGTTTCCCAGGCTGGAGTGCAGTGGCAG-AAT------------CTTGGCTCACTGCAACCTCCACCTCCCA  540

Query 565  GTCTGCAAGTTGATC-CAGG----AAGCTCCCAAACCAGAGTGTGAGAAGGCACTTCTTGCCTTTCAGGAGAGT  633
           | .|.||||..|.|| ||.|    |..||||||            ||.||      ||.|..||.||||     
Sbjct 541  G-GTTCAAGCAGTTCTCATGCCTCAGCCTCCCA------------AGTAG------CTGGGATTACAGG-----  590

Query 634  AAGAACCTCTGCGAAGCCA---TGGAGAACTTTATGCAACAATTAAAGGAAAG---TGGCATGACAATGGAGG-  700
                    ||||.|.|||   |||...|.|||.||   .|.||..||.|.||   .||..|.||.|||..|| 
Sbjct 591  ---------TGCGCACCCACGCTGGGCTAATTTTTG---TATTTTTAGTAGAGACTGGGTTTCACCATGTTGGC  652

Query 701  -AG------CTAAAATATTCTCTGGAGCTGAAGAAAGCTGAGTTGAAGGCAAAATTGTTG  753
            ||      ||.||||    ||..||.||.|.|                           
Sbjct 653  CAGGCTGGTCTCAAAT----TCCTGACCTCAGG---------------------------  681