Nucleotide Global Alignment
Description
- Query:
- TRCN0000470806
- Subject:
- XM_011514772.1
- Aligned Length:
- 1851
- Identities:
- 659
- Gaps:
- 1170
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGCAGCCTGAGGACATGGCGTCGCTGAGCGAGTTCGACTCCTTGGCGGGCAGCATCCCGGCCACCAAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGATCACCGTGTCCTGCAGGAACCTCCTGGACAAAGACATGTTTTCCAAGTCCGACCCACTGTGCGTCATGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATACCCAAGGGATGGAGAACAAGCAGTGGCGGGAGTTTGGGCGCACCGAAGTCATCGACAACACGCTCAATCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACTTCGTGCGCAAGTTCATTGTGGATTACTTTTTCGAGGAGAAGCAGAACCTCCGTTTTGATCTATACGACGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACTCTAAGAGTCCTGATTTATCCAAACACGATTTCCTGGGCCAGGCCTTCTGCACCCTTGGAGAGATTGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGTCCCCTGGGAGCCGCCTGGAAAAGCCCCTCACGATAGGCGCATTCAGCCTGAATTCCAGGACGGGCAAACCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCCAGCTGTGTCCAACGGAAGTGGTCTTTGGATGGAAAGTTTGAGAACCACTGGTCTGGAAGCCTCCGGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTCCCAGGAAAGAAATGTGGCACCATCATCCTGTCCGCTGAGGAGCTCAGCAACTGTAGGGATGTCGCCACCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCAGTTCTGTGCCAACAAGCTGGACAAGAAAGATTTCTTTGGGAAATCTGACCCCTTCTTGGTATTCTACAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCAACGAGGATGGAACGTTCACCATTTGCCACAAGACCGAGGTCATGAAGAACACCCTAAATCCAGTCTGGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACTTTCTCCATTCCCGTGAGAGCCCTCTGCAACGGCGACTACGATCGGACCATCAAGGTGGAGGTGTACGACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGGATCGGGACGGCAGCCATGACTTCATTGGGGAGTTCACCACCAGTTACCGGGAGCTGGCCCGTGGGCAGAGC 888
Query 1 ---------------------------------------ATGAAGAAAAAGAAATACGTGAATTCTGGCACAGT 35
|||||||||||||||||||||||||||||||||||
Sbjct 889 CAATTCAACATCTATGAGGTGGTAAACCCGAAAAAGAAAATGAAGAAAAAGAAATACGTGAATTCTGGCACAGT 962
Query 36 CACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTACATCAAAGGAGGGACCCAGATCAACT 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTACATCAAAGGAGGGACCCAGATCAACT 1036
Query 110 TCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCACATCCCTGCACTACATGAGCCCC 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCACATCCCTGCACTACATGAGCCCC 1110
Query 184 TACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATCCAGCACTACGACAGTGACAAGAT 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATCCAGCACTACGACAGTGACAAGAT 1184
Query 258 GTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTCCCACGAGTTCCCACTGAATGGCA 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTCCCACGAGTTCCCACTGAATGGCA 1258
Query 332 ACCAGGAGAACCCCTCATGCTGCGGCATCGACGGCATCCTGGAGGCCTACCACCGCAGCCTGCGCACTGTGCAG 405
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACCAGGAGAACCCCTCATGCTGTGGCATCGACGGCATCCTGGAGGCCTACCACCGCAGCCTGCGCACTGTGCAG 1332
Query 406 CTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTC 1406
Query 480 CCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGCGCAGACCAAGGAGGCCATTGTCA 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGCGCAGACCAAGGAGGCCATTGTCA 1480
Query 554 ACGCTGCCAAGC------TCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAGAGTTC-GACGCCATGGT 620
|||| || ||| ||| |.|.| ||.||||| || ||
Sbjct 1481 ACGC-GC--AGCCTGGTTTCC---TTTGC-TCTTTATC----------------------TCTGA--------- 1516
Query 621 GGAGCTGGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGACATCGTCCAGTTTGTA- 693
|||| |||||| ||..|| ||
Sbjct 1517 -------------------GTGC------CCTCCC------------------------TCTCCC------TAC 1535
Query 694 -CCCTTCCGGGACTACGTGGACCGCACAGGCAACCACGTGCTGAGCATGGCCCGCCTGGCCCGAGACGTGCTGG 766
||||| |.|| |||.|
Sbjct 1536 CCCCTT--------------------------------TTCT-------------------------GTGTT-- 1550
Query 767 CAGAGATCCCTGACCAACTGGTGTC-CTACATGAAGGCACAGGGCATTCGCCCGCGTCCCCCA-------CCCG 832
||.| |||| ||.|||| |||.| ||.|||| ||.|
Sbjct 1551 ------TCTC-----------TGTCTCTCCATG-------------TTCAC-----TCTCCCATTTCTTTCCTG 1589
Query 833 CAGCACCAACCCACTCGCCCTCGCAGTCCCCAGCCCGCACGCCCCCTG----CGTCCCCCCTGCACACGCACAT 902
||||| ||||..|.||| |..|||||| | |||..|||..
Sbjct 1590 ---------CCCAC---CCCTTCCTGTC-----------CTACCCCTGATTTC-TCCTTCCTTT---------- 1629
Query 903 C 903
Sbjct 1630 - 1629
