Nucleotide Global Alignment
Description
- Query:
- TRCN0000471743
- Subject:
- XR_002957464.1
- Aligned Length:
- 3627
- Identities:
- 660
- Gaps:
- 2967
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGC 74
Query 1 ---------------------------------------------------------------ATGTCGGCGGC 11
|||||||||||
Sbjct 75 TTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGC 148
Query 12 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 222
Query 86 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 296
Query 160 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 370
Query 234 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 444
Query 308 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 518
Query 382 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 592
Query 456 -------------------------------------------------------------------------- 455
Sbjct 593 TAACCCCAAGAAAGGCATCAGGGTTCTGGAGTGGTTGTTTGAGTGACACAGCACAAGGCCTTGATTTCATCATG 666
Query 456 -------------------------------------------------------------------------- 455
Sbjct 667 CTTTTGCTGTGGATGTAGTGTAGCTTGCTGAACAGGTATGGAAGCTGTCTTTGCTGTTAAGTACTTCTCCCGTT 740
Query 456 -------------------------------------------GTTTATTTCACAGAGCAGTGTACATTCTTGT 486
|||||||||||||||||||||||||||||||
Sbjct 741 TGTTTATCAACCTGCAGCTAACAGGATGTCTGCTTTTTTACAGGTTTATTTCACAGAGCAGTGTACATTCTTGT 814
Query 487 CTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTTTTAATTCAGTGTCTAA------------- 547
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTTTTAATTCAGTGTCTAAAGGTTTACAAGTT 888
Query 548 -------------------------------------------------------------------------- 547
Sbjct 889 CAACTTACTCTATTTTATTCAGCTCTTTCACTTACTCTGCCATCACTTCCTACTTGAATCTGAGTTTTAGCTAC 962
Query 548 -------------------------------------------------------------------------- 547
Sbjct 963 TGTAGAGGTCTCAGACCTTTCCTTTTTAGTACTATTAGCCAGGTAAAACTTTGGTTCTTGTGAGTGGTAGGGAT 1036
Query 548 -------------------------------------------------------------------------- 547
Sbjct 1037 GAGTTTTTAGGACAGTATTCAAAGCCTTTTTAAAGGAACCAACTACTCAAATGCTCTACAATGCCAAAAATACA 1110
Query 548 -------------------------------------------------------------------------- 547
Sbjct 1111 ATACTCCTGCAGGTTTTCCCAAGCAAGGCCAAAACAATCAAAATCTGACAGAAAAACACAGCTGTTCAGCTCTG 1184
Query 548 -------------------------------------------------------------------------- 547
Sbjct 1185 GAATCTGATGATAGGCTACTTTTTAATGTCAGGACATCCTTCTAAACTTCCACTTACAGTGTCACATGTAAGCA 1258
Query 548 -------------------------------------------------------------------------- 547
Sbjct 1259 TGAAGGCTGGCTCGTTGGTGAGCCATTGCTTTGTTTTTAGGAAGACAGTTATGAATGCCATGGACAATCTCAGT 1332
Query 548 -------------------------------------------------------------------------- 547
Sbjct 1333 ACATGTTGTTTGTTATGATTTTATTCACGCTAAAGGAATGGGTATTAAAATTAAGTGCATATAATATAGAATTC 1406
Query 548 -------------------------------------------------------------------------- 547
Sbjct 1407 AGTTTCAAGTCTGAAGTTAGCGTAAATTTAGATTCTTCAGACTAACATAAAACATGATTTTGAGAAGTTAAATA 1480
Query 548 -------------------------------------------------------------------------- 547
Sbjct 1481 GGAAGATGCCTTTTTTAGAAGTTTAGCATATTTAGTTTATCTCCCAAATCTTGCTTAGAAATCAAATGTATATA 1554
Query 548 -------------------------------------------------------------------------- 547
Sbjct 1555 AGAGAAGTTAGTTACAGAGCTAGATTGATTAACTACTTCTTTAATGAAGATTTGCTATGAATTTGTTTACTCTT 1628
Query 548 -------------------------------------------------------------------------- 547
Sbjct 1629 TCATACCACCTTCAGATAGCTAGTCAGTTCAGCAGGAGCAGAGACCAGGTTAGCACGCGGATGGGGTGTAATTC 1702
Query 548 ------------------AGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTT 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGTGTTTTTGTGTTGTACAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTT 1776
Query 604 CCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTA----------------- 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAA 1850
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1851 ATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCA 1924
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1925 GAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAATGGCGA 1998
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1999 CACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGATATGAAAAACAGTAGCT 2072
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2073 CCGTATCGAATACATTGACAAATGGATGTGTCATCAATGGACATTTGGACTTCCCCTCCACGACCCCGCTCAGT 2146
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2147 GGGATGGAAAGCAGGAATGGCCAGTGCTTGACAGGAACTAACGGAATTAGCAGTGGATTAGCCCCAGGACAGCC 2220
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2221 GTTTCCGAGTAGCCAGGGTTCTCTCTGCATTAGTGGGACTGAGGAGCCAGAGAAGACCCTGAGAGCTAACCCTG 2294
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2295 AGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGAC 2368
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2369 ATTGGGGATAACCTGTACTATGGACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAG 2442
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2443 TGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGC 2516
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2517 ACCACGGCTCCTAGAGACGCTGACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACC 2590
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2591 CATGTAGCAGCAACTTGAACGAATGTCACAACTTGTACGTTTTTTATATACTTCAACTTTCTGAAAAAGTAAAC 2664
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2665 TTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGA 2738
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2739 GGTGTCCTTTTTATAAGGTGCACTTTTGGAGTTTTTCTGATGCCAATCTCAACATTGTCTTTTTAATACTGTCA 2812
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2813 CCAGATATTGCCATTTTTCTTTTTGTTAAAAGATTATATGATCAAGATAAATTGGGGTGGTAAATCAGGTGCCT 2886
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2887 GGTAATTTATCTCTTTGCACATGGGCATCATTTTAAAAAGCTTGCTTCCACTCTTTTCTGTAGAATTTGACGGA 2960
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2961 ACACAGCTATTTCCCTATGCAAGGTACAGCCTTACAAAGATTTCTGCAGTGATTTGTGTGAAGAAGAGAACGTT 3034
Query 661 -------------------------------------------------------------------------- 660
Sbjct 3035 TGTCTTTTTCAATGAAGCTTTGCAGATCACCATGTGGTTGAAGGTTTTAGTTGTGGACACAGTGGTCCCTCCTT 3108
Query 661 -------------------------------------------------------------------------- 660
Sbjct 3109 AATGATGAAGATCACTGCCTTGGGCTTCATGGAAAACAGGCCCAGCCTGGGGCTGCGTTTGGATTTATTGTTTT 3182
Query 661 -------------------------------------------------------------------------- 660
Sbjct 3183 TATTCCACACTTCCTACTTGGTCTCTGGAAGTTTTACCACATGTAACAGATTCCTTTATATGTAGTGGAAATCA 3256
Query 661 -------------------------------------------------------------------------- 660
Sbjct 3257 CTATTTGTAGAAACTGTCAGGTCAAAATATTTAACTGACTGTTGACATGTATTTTCTTTTTTCCTTGTTTTTGT 3330
Query 661 -------------------------------------------------------------------------- 660
Sbjct 3331 TTTTTGGGGTTTTCTGCTTTAAGATATATACCACTATGTATATCCAGTTAACTGAGAGAATTTTGACTCTCTTA 3404
Query 661 -------------------------------------------------------------------------- 660
Sbjct 3405 ATAAAACTGCATTAAGTTTTTGATTTTGTAGAAATTAGCTTTTGTCTAGGCAACTAGTGGTTATACTCTGCAAA 3478
Query 661 -------------------------------------------------------------------------- 660
Sbjct 3479 TATTGTAATGAATTTTTACTTTTTTGATTTTTGTAATAAAAATTGGTGCAGATAAAATGTCAAATGAACAAACC 3552
Query 661 -------------------------------------------------------------------------- 660
Sbjct 3553 AGTGTTCTAAGAGTGTTACTAACATTTTGTTCTAAAACTGTCCTTCACAAATTGAATAAAAAACTCTCACACTC 3626
Query 661 - 660
Sbjct 3627 A 3627
