Nucleotide Global Alignment
Description
- Query:
- TRCN0000471919
- Subject:
- XM_017318219.1
- Aligned Length:
- 2159
- Identities:
- 1246
- Gaps:
- 790
Alignment
Query 1 ATGTTTGGGAAGAAAAAGAAAAAGATTGAAATATCTGGCCCGTCCAACTTTGAACACAGGGTTCATACTGGGTT 74
||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||.||
Sbjct 1 ATGTTTGGGAAGAAAAAGAAAAAGATCGAAATATCTGGCCCATCCAACTTTGAACACAGGGTTCATACTGGATT 74
Query 75 TGATGCACAAGAGCAGAAGTTTACCGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGATACGGCCAACAGGC 148
||||.|||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||||||
Sbjct 75 TGATCCACAAGAGCAGAAGTTTACTGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGACACAGCCAACAGGC 148
Query 149 CAAAGCCTATGGTGGACCCTTCATGCATCACACCCATCCAGCTGGCTCCTATGAAGACAATCGTTAGAGGAAAC 222
|.|||||.|||||||||||.|||||||||||||||||.|||||||||||.|||
Sbjct 149 CCAAGCCCATGGTGGACCCATCATGCATCACACCCATACAGCTGGCTCCCATG--------------------- 201
Query 223 AAACCCTGCAAGGAAACCTCCATCAACGGCCTGCTAGAGGATTTTGACAACATCTCGGTGACTCGCTCCAACTC 296
Sbjct 202 -------------------------------------------------------------------------- 201
Query 297 CCTAAGGAAAGAAAGCCCACCCACCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATG 370
Sbjct 202 -------------------------------------------------------------------------- 201
Query 371 GCTTCATCACCTTCTCCCAGTATTCCAGCGAATCCGATACTACTGCTGACTACACGACCGAAAAGTACAGGGAG 444
Sbjct 202 -------------------------------------------------------------------------- 201
Query 445 AAGAGTCTCTATGGAGATGATCTGGATCCGTATTATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAAT 518
Sbjct 202 -------------------------------------------------------------------------- 201
Query 519 GAAAATGAAGCACGGGGAGGCCTACTATTCTGAGGTGAAGCCTTTGAAATCCGATTTTGCCAGATTTTCTGCCG 592
Sbjct 202 -------------------------------------------------------------------------- 201
Query 593 ATTATCACTCACATTTGGACTCACTGAGCAAACCAAGTGAATACAGTGACCTCAAGTGGGAGTATCAGAGAGCC 666
Sbjct 202 -------------------------------------------------------------------------- 201
Query 667 TCGAGTAGCTCCCCTCTGGATTATTCATTCCAATTCACACCTTCTAGAACTGCAGGGACCAGCGGGTGCTCCAA 740
Sbjct 202 -------------------------------------------------------------------------- 201
Query 741 GGAGAGCCTGGCGTACAGTGAAAGTGAATGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCTTCGT 814
Sbjct 202 -------------------------------------------------------------------------- 201
Query 815 ACCTGAATCAGACAAGCCCTCAGCCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGATG 888
Sbjct 202 -------------------------------------------------------------------------- 201
Query 889 ATGCCATTTGGAGCAAGTGCATTTAAAACCCATCCCCAAGGACACTCCTACAACTCCTACACCTACCCTCGCTT 962
Sbjct 202 -------------------------------------------------------------------------- 201
Query 963 GTCCGAGCCCACAATGTGCATTCCAAAGGTGGATTACGATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAG 1036
||||||||||||||||||||||||||||||.||||.|||||||||||||
Sbjct 202 -------------------------AAGGTGGATTACGATCGAGCACAGATGGTCTTCAGTCCTCCACTGTCAG 250
Query 1037 GGTCTGACACCTACCCCAGGGGCCCTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGT 1110
||||.|||||.||||||||.|||||..||||||||||||||||||||||||||.|.|||||.||.|||.||||.
Sbjct 251 GGTCCGACACTTACCCCAGAGGCCCCACCAAACTACCTCAAAGTCAAAGCAAAGCAGGCTACTCTTCAGGCAGC 324
Query 1111 CACCAGTACCCGTCTGGGTACCACAAAGCCACCT-TGTACCATCACCCCTCCCTGCAGAGCAGTTCGCAGTACA 1183
|||||||||||.|||||||||||||||| ||.|| |.|||||.||.||.||||||||.|.||||||.|||||||
Sbjct 325 CACCAGTACCCTTCTGGGTACCACAAAG-CATCTCTATACCACCATCCATCCCTGCAAACCAGTTCTCAGTACA 397
Query 1184 TCTCCACGGCTTCCTACCTGAGCTACCTCAGCCTCTCATCCAGCACCTACCCGCCGCCCAGCTGGGGCTCCTCC 1257
|||||||.|||||.|||.|.||||..|||||..||||.||.|||||||||||.||.||.|||||||||||||||
Sbjct 398 TCTCCACCGCTTCTTACTTAAGCTCTCTCAGTATCTCCTCGAGCACCTACCCTCCACCTAGCTGGGGCTCCTCC 471
Query 1258 TCCGACCAGCAGCCCTCCAGGGTGTCCCATGAACAGTTTCGGGCGGCCCTGCAGCTGGTGGTCAGCCCAGGAGA 1331
||.||||||||||||||.|||||.|||||||||||.||.||.||.||||||||.||||||||||||||||||||
Sbjct 472 TCAGACCAGCAGCCCTCAAGGGTATCCCATGAACAATTCCGAGCTGCCCTGCAACTGGTGGTCAGCCCAGGAGA 545
Query 1332 CCCCAGGGAATACTTGGCCAACTTTATCAAAATCGGGGAAGGCTCAACCGGCATCGTATGCATCGCCACCGAGA 1405
||||||||||||.||||..||||||||.||||||||.|||||.||.||.||||||||.|||||.||.||.||||
Sbjct 546 CCCCAGGGAATATTTGGATAACTTTATTAAAATCGGAGAAGGGTCGACAGGCATCGTGTGCATTGCAACAGAGA 619
Query 1406 AACACACAGGGAAACAAGTTGCAGTGAAGAAAATGGACCTCCGGAAGCAACAGAGACGAGAACTGCTTTTCAAT 1479
||||||||||.||.|||||.|||||||||||||||||||||||.|||||.||||||||.|||||.|||||.|||
Sbjct 620 AACACACAGGCAAGCAAGTGGCAGTGAAGAAAATGGACCTCCGAAAGCAGCAGAGACGGGAACTCCTTTTTAAT 693
Query 1480 GAGGTCGTGATCATGCGGGATTACCACCATGACAATGTGGTTGACATGTACAGCAGCTACCTTGTCGGCGATGA 1553
|||||||||||.|||||.|||||||||||||||||.||.|||||||||||||.||||||||||||.||.|||||
Sbjct 694 GAGGTCGTGATAATGCGTGATTACCACCATGACAACGTAGTTGACATGTACAACAGCTACCTTGTTGGAGATGA 767
Query 1554 GCTCTGGGTGGTCATGGAGTTTCTAGAAGGTGGTGCCTTGACAGACATTGTGACTCACACCAGAATGAATGAAG 1627
|||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||
Sbjct 768 GCTCTGGGTGGTCATGGAGTTTCTAGAAGGTGGTGCCTTGACAGACATTGTCACTCATACCAGAATGAATGAAG 841
Query 1628 AACAGATAGCTACTGTCTGCCTGTCAGTTCTGAGAGCTCTCTCCTACCTTCATAACCAAGGAGTGATTCACAGG 1701
|.|||||||||||||||||||||||||||||||.||||||.|||||||||||||||||||||||||||||||||
Sbjct 842 AGCAGATAGCTACTGTCTGCCTGTCAGTTCTGAAAGCTCTGTCCTACCTTCATAACCAAGGAGTGATTCACAGG 915
Query 1702 GACATAAAAAGTGACTCCATCCTCCTGACAAGCGATGGCCGGATAAAGTTGTCTGATTTTGGTTTCTGTGCTCA 1775
||||||||.|||||||||||.||.||||||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 916 GACATAAAGAGTGACTCCATTCTTCTGACAAGCGATGGCCGGATAAAGTTATCTGACTTTGGTTTCTGTGCTCA 989
Query 1776 AGTTTCCAAAGAGGTGCCGAAGAGGAAATCATTGGTTGGCACTCCCTACTGGATGGCCCCTGAGGTGATTTCTA 1849
||||||||||||||||||.||||||||.|||.||||.||.||.||.|||||||||||.||||||||||||||.|
Sbjct 990 AGTTTCCAAAGAGGTGCCAAAGAGGAAGTCACTGGTGGGTACCCCATACTGGATGGCACCTGAGGTGATTTCCA 1063
Query 1850 GGCTACCTTATGGGACAGAGGTGGACATCTGGTCCCTCGGGATCATGGTGATAGAAATGATTGATGGCGAGCCC 1923
|||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||||||
Sbjct 1064 GGCTACCTTATGGGACAGAGGTGGACATCTGGTCCCTCGGGATAATGGTGATAGAGATGATTGATGGGGAGCCC 1137
Query 1924 CCCTACTTCAATGAGCCTCCCCTCCAGGCGATGCGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCT 1997
|||||.||||||||||||||.||.|||||.|||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 CCCTATTTCAATGAGCCTCCTCTGCAGGCCATGAGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCT 1211
Query 1998 ACACAAGGTTTCTTCAGTGCTCCGGGGATTCCTAGA-CTTGATGTTGGTGAGGGAGCCCTCTCAGAGAGCAACA 2070
|||||||||||||||..|||||||.||||||||||| ||| |||||||||||||||||||||||.|||||.|||
Sbjct 1212 ACACAAGGTTTCTTCCATGCTCCGAGGATTCCTAGATCTT-ATGTTGGTGAGGGAGCCCTCTCAAAGAGCCACA 1284
Query 2071 GCCCAGGAACTCCTCGGACATCCATTCTTAAAACTAGCAGGTCCACCGTCTTGCATTGTCCCCCTCATGAGACA 2144
||.||.||||||||.||||||||||||||||||.|.|||||||||||.|||||||||||.||.|||||||||||
Sbjct 1285 GCTCAAGAACTCCTTGGACATCCATTCTTAAAATTGGCAGGTCCACCATCTTGCATTGTTCCTCTCATGAGACA 1358
Query 2145 ATACAGGCATCAC 2157
||||||.||||||
Sbjct 1359 ATACAGACATCAC 1371
