Nucleotide Global Alignment

Description

• Query: TRCN0000472148
• Subject: XM_006521079.1
• Aligned Length: 1271
• Identities: 840
• Gaps: 304

Alignment

Query    1  ATGGCAGGGAAAGTAAAATGGGTCACTGATATCGAGAAGTCAGTGCTGATCAATAACTTTGAAAAGAGAGGATG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGTCCAAGTGACAGAAAACGAGGACTGGAATTTTTACTGGATGAGTGTGCAAACCATCCGAAATGTGTTCAGCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTGAAGCTGGATATCGGCTCTCAGATGACCAAATAGTCAACCATTTTCCAAACCACTATGAACTGACCCGGAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GACCTGATGGTGAAGAACATCAAAAGATACAGGAAGGAGCTGGAGAAAGAAGGGAGTCCTCTGGCAGAAAAAGA  296
                                                                                     |
Sbjct    1  -------------------------------------------------------------------------A  1

Query  297  TGAA-AATGGAAAATACCTCTAT-CTGGACTTTGTTCCAGTCACCTATATGCTGCCCGCTGACTACAACCTGTT  368
            |||| |.|||||      |.|.| || ||||||||.||.||||||||.|||||.|||||.||||||||||||||
Sbjct    2  TGAAGACTGGAA------TTTTTACT-GACTTTGTCCCCGTCACCTACATGCTCCCCGCCGACTACAACCTGTT  68

Query  369  TGTAGAGGAGTTCCGGAAGAGCCCGTCCAGCACCTGGATCATGAAGCCTTGTGGCAAGGCCCAGGGAAAGGGCA  442
            |||.||.|||||||||||||||||||||||||||||||||||||||||.||||||||.||.||||||||.||||
Sbjct   69  TGTGGAAGAGTTCCGGAAGAGCCCGTCCAGCACCTGGATCATGAAGCCATGTGGCAAAGCACAGGGAAAAGGCA  142

Query  443  TCTTCCTTATCAACAAGCTCTCACAGATCAAAAAGTGGTCCCGGGACAGCAAGACATCTTCGTTTGTGTCTCAA  516
            |||||||.|||||.|||||.||.||||||||||||||||||||||||||||||||.||.|||||||||||.||.
Sbjct  143  TCTTCCTCATCAATAAGCTTTCGCAGATCAAAAAGTGGTCCCGGGACAGCAAGACGTCCTCGTTTGTGTCGCAG  216

Query  517  TCTAATAAGGAAGCCTACGTGATCTCTCTCTATATTAACAACCCGTTACTAATTGGCGGGAGGAAGTTCGACCT  590
            ||.|..||.|||||.|||||||||||..|||||||.||.||.|||||.||.||.||.||.||||||||.|||||
Sbjct  217  TCCACAAAAGAAGCGTACGTGATCTCAGTCTATATCAATAATCCGTTGCTCATCGGTGGAAGGAAGTTTGACCT  290

Query  591  GCGCTTGTACGTTCTGGTGTCCACGTACCGTCCACTGCGCTGTTACATGTACAAGCTTGGGTTTTGCCGGTTCT  664
            .||..||||.||.|||||||||||||||||.||.||||||||.||||||||||||||||||||.|||||.||||
Sbjct  291  TCGTCTGTATGTCCTGGTGTCCACGTACCGCCCGCTGCGCTGCTACATGTACAAGCTTGGGTTCTGCCGCTTCT  364

Query  665  GCACAGTGAAATACACCCCGAGTACCAGTGAGCTGGACAACATGTTCGTTCATCTCACCAACGTCGCCATCCAG  738
            ||||||||||.||||||||.||||||||||||||.|||||||||||.||.||.||.||||||||.|||||||||
Sbjct  365  GCACAGTGAAGTACACCCCTAGTACCAGTGAGCTCGACAACATGTTTGTCCACCTTACCAACGTGGCCATCCAG  438

Query  739  AAACACGGGGAGGACTACAACCACATCCATGGGGGCAAGTGGACAGTGAGTAACCTGCGGCTCTACCTGGAGAG  812
            ||.||.|||||||||||||||||||||||.||.|||||||||||.||.|..||||||||.||||||||||||||
Sbjct  439  AAGCATGGGGAGGACTACAACCACATCCACGGTGGCAAGTGGACTGTCAACAACCTGCGTCTCTACCTGGAGAG  512

Query  813  CACCCGCGGCAAGGAGGTGACCAGCAAGCTGTTCGACGAGATCCACTGGATCATCGTGCAGTCCCTGAAGGCTG  886
            ||||||.|||...||||||||||||||||||||.||.||.|||||||||||||||||||||||.||.|||||.|
Sbjct  513  CACCCGAGGCCGAGAGGTGACCAGCAAGCTGTTTGATGAAATCCACTGGATCATCGTGCAGTCTCTCAAGGCCG  586

Query  887  TGGCGCCGGTGATGAACAATGACAAGCACTGCTTTGAATGCTATGGCTACGACATCATCATCGACGACAAGCTG  960
            |||||||.|||||||||||.|||||.|||||||||||||||||.||||||||||||||||||||.|||||||||
Sbjct  587  TGGCGCCAGTGATGAACAACGACAAACACTGCTTTGAATGCTACGGCTACGACATCATCATCGATGACAAGCTG  660

Query  961  AAGCCCTGGCTGATCGAGGTGAATGCGTCCCCGTCTCTCACGTCCAGCACTGCCAATGACCGAATCCTCAAGTA  1034
            ||||||||||||||||||||.||.|||||||||||||||||.||||||||.|||||.||.||||||||.|||||
Sbjct  661  AAGCCCTGGCTGATCGAGGTCAACGCGTCCCCGTCTCTCACATCCAGCACCGCCAACGATCGAATCCTTAAGTA  734

Query 1035  CAACCTGATTAATGACACCCTCAACATCGCCGTCCCGAATGGTGAAATCCCAGACTGCAAATGGAACAAGTCGC  1108
            ||||||||||||.||||||||||||||.||.|||||.||.||.||.||.||.||||||||.|||||||||||.|
Sbjct  735  CAACCTGATTAACGACACCCTCAACATTGCGGTCCCCAACGGCGAGATTCCCGACTGCAAGTGGAACAAGTCTC  808

Query 1109  CACCTAAGGAAGTCCTCGGCAATTACGAGATTCTGTATGATGAAGAATTGGCCCAGGGTGACGGGGCTGACCGG  1182
            |.||.||||||||.||.|||||.||.|||||.||||||||.||.||..||||||||||||||||||||||.||.
Sbjct  809  CCCCCAAGGAAGTACTTGGCAACTATGAGATCCTGTATGACGAGGAGCTGGCCCAGGGTGACGGGGCTGAACGA  882

Query 1183  GAGCTGAGAAGCCGTCAGGGTCAGTCTCTGGGGCCCAGAGCAGGCCGATCGAGAGACTCGGGGAGAGCGGTCCT  1256
            |||||.||||.|||.|..||.|||.|..|||||||||||||||||||.|||||||||||.||.|||...|||||
Sbjct  883  GAGCTTAGAAACCGCCCAGGCCAGCCAGTGGGGCCCAGAGCAGGCCGCTCGAGAGACTCAGGAAGAAGTGTCCT  956

Query 1257  CACCACCTGGAAG  1269
            |||.|||||||||
Sbjct  957  CACAACCTGGAAG  969