Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001736990.1
- Aligned Length:
- 4500
- Identities:
- 205
- Gaps:
- 4268
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAGGAGCGGGGCCGGGAGCTGCGAGGAGCCCCCCAGACGTCGCCGAGCGCGAGGGCGGGCGTGCTCGGAGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCGCTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCAGGTCCCCTCCCTCTCCGCCGGGACGCGGGAGAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGGCCGGCCCTGCAGATCAGTTGGCCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTTCCTCAGTGGAAATCTACTCACTATGATGTGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAACGTGATAAGAAGCACCTGGATGAGACATTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAGGATCCTTATTCCTGTAAACTACTCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGATCGAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCAATGATGTGGGTTTCCAGAGGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGAGGCCCTCTTCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAGGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATTCATCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TACCAGAGAGCTTTGAAGGTACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAGAAATCTCCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAAGTGACAGTGAATGATGGAGGGGGAGTTCTCAGAGTCATTACAGCTGGGGAGGGTGCATTGCCTCATGAATT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTGGAAGGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGACTGTGGAAACAACGAGCTTCAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTGTTGCTGAAGACAGATGATGACTGTTACATAGACCTCGAAGCTGTATTTAATAGGATTGTCCAAAAGAATC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGATGGGCCTAATTTTTGGTGGGGAAATTTCAGACTGAATTGGGCAGTTGACCGAACCGGAAAGTGGCAGGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGGAGTACCCGAGCCCCGCTTACCCTGCCTTTGCATGTGGGTCAGGATATGTGATCTCCAAGGACATCGTCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGGCTGGCAAGCAACTCGGGGAGGTTAAAGACCTATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGGCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCATAGGACCTAAAAGATACCAGGACAGTCTGTGGCTGTGTGAGAAGACCTGTGAGACAGGAATGCTGTCTTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTCAGTATTCTCCGTGGGAACTGACGGAACTGTGGAAACTGAAGGAACGGTGCGGTGATCCTTGTCGATGTCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCAAGATAACAGGGACTTGAATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACTGGCACTTTCACCCAGAACC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AATGCGGTGTTTCTTAATGTTTGCACAAATTTCCTTAAAAATCAACTTGTACTGTAGCATAAGAAAAGTTTTTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTATCTATTGGAAGATTATCAGAAAAATACCAAGTTATTTTATAAAAGAAAAAATATTTCTAAATCCTGATGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATTGTGGCTAATTAGTAATTCACCATTACCTATAGTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAATTAGGATAATTATCAGACA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAAGGAACTCACAGGAATGCTGTGTGATCATGTGATCACATATTTGAGCAGTGGTCACTTATACCAAAGTTTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAACTTGAAGAGGAACCAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TATGATTCTCAGTTCTGAACCTTGGTTTTAAAGAAGTTCATTTATATGGTAGACTAATACCCAAATTTTCTTTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCCATCTAACATAAATCCTGAAGGTCACAGTTTAGTACTCATAGTTTTTAAATGCTAAAGTTGTGTGAGTATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AATAAAAGCAAATACCTCTCAGGGTTTTAGTGCCATCGGGAAGGATATTTCTAAATTTTGTTGACATTTTGAAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAATTAGTTTTGCTTTCCTCCTATCATTGCCTAATGTTTACCTAATATGAGTACATTTCAATCAAAGCTGGTTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTGATTAATTTAAGTACTCTTAGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATAGTGCAACTGAGAAGACAGATAATAGCATATTGTTATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATTTCCCAAAATGACCAACCAAATCATTTCTAGTAACCCTTTAAAATAGTAGTTTCAATAGAGAATTCCATTAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AACTAGTCTTATGACAGATATTAACTGTGTTCAGATTTTATTAGGCTAGCTAGTTTCTTTCTATTTAATATTTA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AATCTTATCATGAAATGCAGTGATGAGCTGTAAAAATAAATATGAAATAAGATCAGAAAATCATTAGTAGGTTC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AAAGCCTTTATTATTGCTATTATGTATAAGCCTAGAAATGGTCACTTCCCAACAAAAAATACATCCCTTGTTAT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTTAGGACAAGTTGTAAACCCCCTTTGTTTTGACAGTAGAATTGTTCCAGTGAATCATTTATTTCCGGTGAAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCCAGACACGATAAGCAGTGTGGTCTTTAAATTTTATTAGTTGGTTGTCACCATCGCACTAATAGACAATCTCC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ATTTTCCACAGAATAAAACTGTAATGACTTTAGGTCATTTTCCAGCTCGATTTCTCTGCCCGGCTTCTAAAATT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGAACGAAGGTGGGGAAGGATGTGATTAAGACAGATCCGATAAAGCATGCTACACATACTCTTCCCCCACCCCG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCCCCAGGCAGTAGCTTACCCTTAAAATCAAACAAACAGACCCATGGTCTCCATTTAGAATCAAACTGTTGCTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCTAGAGACAGTTTAATGTCATAATACGAGGACTAAGCTTGACTTTGACTTTGTATTTTGCTGGGCAACTTACT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTGGGACTTTCATAGGACAACAGAAGGTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTGAATTGTCATGGAGCCTATCAAAAGACAAGAAAAGTCCATTCGTTCTCTCAAATGACAGTTACCTGTAAAAC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TAGCTCATGTGATGAGACCACAGTATCATTGCAATGATAGCTGTATCTGTCTTTTTTTTTTTTTTTTTTTTGAG 3478
Query 1 ------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGG 50
| |||||.|||||||.|||||||||||||||||.|||..|.|||||||
Sbjct 3479 ACTGACTTACTTACTTACTTAAGTA---AGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAATGGTGTAATCTCGG 3549
Query 51 CTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGAC 124
||||||||||||||.||.||||.|||||||.|.|||||.||||||||||||||.||||||||||
Sbjct 3550 CTCACTGCAACCTCCGCTTCCCGGGTTCAAACAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGG---------- 3613
Query 125 ATG--CACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGT 195
|| ||.||||||.|||.||||| ||||||||||||.||.||||||||||||..|||||||.|.|||||||||
Sbjct 3614 -TGCCCATCACCACACCCAGCTAACTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGT 3686
Query 196 CTTGAACTCCTGACCTCAAGTGATCCACC--ACCTCGGCCTCCCAAAGTGTTGAGA------------------ 249
||||||||||||||||| |||||||.|| .||| ||||.|||||||||.||.||
Sbjct 3687 CTTGAACTCCTGACCTC--GTGATCCGCCCGCCCT-GGCCCCCCAAAGTGCTGGGATTACAAGCATGAGCCCAG 3757
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3758 CGCCTGGCTGTATCTTTCATTTTACCCAAGTCACTTTACCCAAGTAAGTAATTAGGGGAAAGCCTGAGTCTTGT 3831
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3832 ACCACCTGTTCATTTGGGGAACTGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATA 3905
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3906 CCATTTCAGTAGTGTATTTCTTTCTTAATCTGAATAAACCAGAATGATACTCTCAGCACAGAAGAATAAAGGGA 3979
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3980 GCGAGTCATTAACGTTTTCTTTTTAAACCTTTATGATGACTTCCTTATGAATTACTGAACGAACACTGGAATGG 4053
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4054 GACTCAGGTATCCTGAGGACATCTCTCAACTCTGGCCTTAGTTCCCCCTCTGTAAAATTAGGGTGCCAACTAAA 4127
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4128 TGATCTACAAGGTCCCTTCCAGCGCCGCCATTCTGTAATTACATCATGTGTAACTGTATTAAACATACACAAGT 4201
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4202 GACTGCCAGGCATGGGAATGTAACTTCCGAGTAAATGCTTTGGTTTGTTCAGAATACACTATGAACTTCTTTCC 4275
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4276 AAAGACGGGTTGTGGTAAATAGTGGATATTTTGATTATAAGAAATAGAGTTTCCTTGAAGCTTTAGCTGGAGAT 4349
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4350 ACAGCAATAGTGTGGTGTTCCTACAAATATCACAGTGTATTCAAACATATTTTTCTATCAAAAATCATTTTTGT 4423
Query 250 ------------------------------------------------------------ 249
Sbjct 4424 AAAAGCTGTGTGTTTTTATCCAACTTGTGATAATAAATGTTCTTTATTTTAGAATAAAAA 4483
