Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001737158.2
- Aligned Length:
- 4374
- Identities:
- 217
- Gaps:
- 4131
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGCCACCCTGGGGAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGAGGGTGGGAGTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGTGCGGGCCTGAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGCCGCACTAAGAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGATGTCGGGAGCTATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCCCGCTGTGCCACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCGTGGCCGCGCGACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGCGGACAGCCCCTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGCCCTGGGTCAGCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCGACAAGAAGTTGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCACGCGGGAGGCCATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTATCCACGCCCTCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAGCCAATACGAAGAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGTCCACCTGGTCATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGATGGAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGACCACCGAGCTGAATTCGCGCGCTGTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGTGGTGCTAACACGCTGGCAGGGGGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGAAAGATGTCGGGGTCACCCGTCCAAAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGGCGAGAACACGCCCTTCGCAGAGCACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGAGCCTAAAGGACCAGGTACAGGAGCTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATGGGAGACGTCCTGCACAAGTCCCTGCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGGGTCGTCTTCCAGGAGGTAGCCCTCCCAAGGACTCTAACTCCAGCCCCACCTGTCAGGGGATACCTGGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACCCTAAGACACTTTTCTCTTTCAGATTTGGGAGGAAGCCTATCAGCGAGTGGCTAATGAGCAGGAGATTTAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAGGTTCCAGACAGTTGGCTGCCGAGTGAACCCTCTGTCCCTGAGCTAACCCACATACTAGCAGAGGAGGAAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCAGAGTCGGCCACTAACCAGATGCAAATCCCCACACTCTTCCCCTTAGCGCTTGACCGTGCCTCCCAGCTGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACTGGCCTCAAATGATGCATGTGAGGTCAGGATTCATTGAGTAGAATGCCCCCACCAAGTGCCTCCCTCTTTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTAGAGGTCATCATGGAAATGGTCGGGATATTTACGTGGTGCCTGGCTTGAGTAAAAATCTGAAGCCAGATGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTCAGGATTAAGACCCCATGCTCTGGCCTTGGCCCCACAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAATGCCTACCTGACCACCATCACCAAGCAGATCACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGAGCCCAGGTTTCAGGCACCCGTGGATGAGCAGTCAGAGAGTCTACAGAACACGCACGACGACAGCAGGAAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACGCGGCCTCAGCCAGGAATAATCCAGGAAGTGTCCCGGAAAAGAGAGAGAAGACATCAGAGCCTAAAGGAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAGCTGGGCTCCGAACGGCCTCTCAGAAGAGCCTCTACTGAAAAATATGGATCATCACAGATCCAAACAGAAAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATGGGGGCGATGTCCCCACATGGAGGGAACACCCGACTTAGCAAATGGGACCGGTCCCCAGGGTCAGGCTCTTA 2516
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 2517 GAGCAGGCACAAGACTGGGACACTGGACAGAAGGTTGTTCCCATGATGGTTTTTTTTATTTTTTATTTTTGAGA 2590
Query 2 TGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGCAACCTCTGCCTCCCA 73
||||||.|||||||||||||||||||||||||.|.||| || ||||||||||||||||||||||||||||..
Sbjct 2591 TGGAGTTTCGCTCTGTTGCCCAGGCTGGAGTGTAATGG--TGCAATCTCGGCTCACTGCAACCTCTGCCTCCTG 2662
Query 74 GGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCAC----CACCACGCCCGGC 143
|||||||||||||||.||||||||||||||.||||||||||||.| |||.||.| ||||||||||.||
Sbjct 2663 GGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATT----ACAGGCGCCTGACACCACGCCCCGC 2732
Query 144 TAA--TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAG 215
||| ||||||||||||.||.||||.|||||||..|||||||.|.|||||||||||..|||.||.|||||||.|
Sbjct 2733 TAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCAGACCTCAGG 2806
Query 216 TGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA--------------------------------------- 249
||||||||| .||||.|||||||||||||.|||||
Sbjct 2807 TGATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGGGTGAGTCACCGCGCCTGGCCAATGTTGTTGT 2880
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2881 TGTTTTTAAGACAGAATTTCACTCTTTGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGGCTCACCGCAAC 2954
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2955 CTCCGCCTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCCCCAGAGTAGCTGGGATTACAGGCATGTACCATCA 3028
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3029 CACCCGGCTAATTTTTTGTATTTTAAGTAGAGAGGGGGTTTCTCCATGTTGGTCAGGCTGGCCTCGAACTCCCA 3102
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3103 ACCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGGGATTACAGGGGTAAGCCACTGTGCCCGGCCGGT 3176
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3177 TATTTCTTTAAAAGGTAATCATTTGTCAAGAGTAAAACCCAGAAGCTCTGACAGGCCATAATTTCAGATCCTTT 3250
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3251 GGCTTGGGCAGTTTTGATTTTCCCCGTGTTTGCATGGCATGAAGTCTTCGTCCTTGTCACAGTAGCTTGGGATG 3324
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3325 ACTCCCAGTCCACATGGAAAACATCAGGGAGTGACAATCCAGCAAGAAATCCCTCGCTAGTTCCACACCTACGC 3398
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3399 ACCGAGCGTCGGTGTGCCAGGCCCTGTGCTGGGCAGAGTGTGGTATGTCAGGGTGTGCCGGTTTTAGGTAACAA 3472
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3473 GACTCCACCACTGAGTGGCACCTGCCCTATTGCAAAGGAATCCAGTTCCTCCGGAATAACAGTCCCACTGTTAA 3546
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3547 CCTGGTGCTACTGGGAAGTTCCACACAGTAATCTGAGCAGTGACTCATGGAAGGATGAGGAACGTTTGCTCCAG 3620
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3621 CTTCTCTCCCTTTCCAGCAAGGGCAGAGCTCCTAAAGCCAGGGGTTAGCACCTGGCCAGCTTATGTGGCAGATG 3694
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3695 GTCTCAGTTACAACTTCGCTGCTTTCCCAAACTCCTGCAGCCCTCCTGAGTCCGACTTCCGTTGATAGCAAGGC 3768
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3769 ACTGGGTGGCAGCAACCTTTTTTCTAGTAGTTTTTTCCCAGCAGTTTTCCATTTCTCCACAGTATCCTTTTCAT 3842
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3843 TTAGAGGAGCTTAATAAATGCTTTTTAAAAAGTAACCCACGTGACGTAAAATTTTACAAGTTTTTGTGGCAAAA 3916
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3917 TGATGCCCAGATAGTCACATTTAAGCAAATATTCAGCTTGATTCAGTGATTAACAGCAAATGGGTCTACGTGCT 3990
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3991 AACATGGCAGCACATTCAACACATAACACATCACTCACATTGACGTCCACTGTCCCTGCACCTGCTACTTCAGG 4064
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4065 GGCACTGAGGCTCCTGTTCCAAGGCCTTACAAACCTATGTGGTGGCCTGCAGGGCAAAAGGAATTATCATTACA 4138
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4139 ACTGGTTAGAGGTAGGAATTCAGAAAGAAATTGAGGAGGCCAAACACACGTCGTTTGAGGCTAAAGGCTTAAGA 4212
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4213 CGCTTCTTACCCAAGAGTGACCTCAGAGTTTCACATCCCAGACAATCACACTGTGGTTGAGTGAAATCAAGTGC 4286
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4287 AGTTTTATTTAAGAACTGGAAAGAATAATCAGTATCTGTGAAAGAAAATCCAATTTAGAATATTTAAATAAACA 4360
Query 250 -------- 249
Sbjct 4361 TTTATGTA 4368
