Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001737159.2
- Aligned Length:
- 4212
- Identities:
- 217
- Gaps:
- 3969
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGCCACCCTGGGGAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGAGGGTGGGAGTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGTGCGGGCCTGAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGCCGCACTAAGAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGATGTCGGGAGCTATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCCCGCTGTGCCACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCGTGGCCGCGCGACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGCGGACAGCCCCTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGCCCTGGGTCAGCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCGACAAGAAGTTGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCACGCGGGAGGCCATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTATCCACGCCCTCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAGCCAATACGAAGAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGTCCACCTGGTCATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGATGGAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGACCACCGAGCTGAATTCGCGCGCTGTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGTGGTGCTAACACGCTGGCAGGGGGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGAAAGATGTCGGGGTCACCCGTCCAAAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGGCGAGAACACGCCCTTCGCAGAGCACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGAGCCTAAAGGACCAGGTACAGGAGCTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATGGGAGACGTCCTGCACAAGTCCCTGCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGGGTCGTCTTCCAGGAGGTAGCCCTCCCAAGGACTCTAACTCCAGCCCCACCTGTCAGGGGATACCTGGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACCCTAAGACACTTTTCTCTTTCAGATTTGGGAGGAAGCCTATCAGCGAGTGGCTAATGAGCAGGAGATTTAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAGGTTCCAGACAGTTGGCTGCCGAGTGAACCCTCTGTCCCTGAGCTAACCCACATACTAGCAGAGGAGGAAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCAGAGTCGGCCACTAACCAGATGCAAATCCCCACACTCTTCCCCTTAGCGCTTGACCGTGCCTCCCAGCTGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACTGGCCTCAAATGATGCATGTGAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGAGAATGCCTACCTGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCACCATCACCAAGCAGATCACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGCTGGAGCCCAGGTTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGGCACCCGTGGATGAGCAGTCAGAGAGTCTACAGAACACGCACGACGACAGCAGGAACAACGCGGCCTCAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGGAATAATCCAGGAAGTGTCCCGGAAAAGAGAGAGAAGACATCAGAGCCTAAAGGAAACAGCTGGGCTCCGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACGGCCTCTCAGAAGAGCCTCTACTGAAAAATATGGATCATCACAGATCCAAACAGAAAAATGGGGGCGATGTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCCACATGGAGGGAACACCCGACTTAGCAAATGGGACCGGTCCCCAGGGTCAGGCTCTTAGAGCAGGCACAAGA 2368
Query 1 -----------------------------------------------------------ATGGAGTCTCGCTCT 15
|||||||.|||||||
Sbjct 2369 CTGGGACACTGGACAGAAGGTTGTTCCCATGATGGTTTTTTTTATTTTTTATTTTTGAGATGGAGTTTCGCTCT 2442
Query 16 GTTGCCCAGGCTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTC 87
||||||||||||||||||.|.||| || ||||||||||||||||||||||||||||..||||||||||||||
Sbjct 2443 GTTGCCCAGGCTGGAGTGTAATGG--TGCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTC 2514
Query 88 TTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCAC----CACCACGCCCGGCTAA--TTTTGTATT 155
|.||||||||||||||.||||||||||||.| |||.||.| ||||||||||.||||| |||||||||
Sbjct 2515 TCCTGCCTCAGCCTCCCGAGTAGCTGGGATT----ACAGGCGCCTGACACCACGCCCCGCTAATTTTTTGTATT 2584
Query 156 TTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCT 228
|||.||.||||.|||||||..|||||||.|.|||||||||||..|||.||.|||||||.|||||||||| .|||
Sbjct 2585 TTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCAGACCTCAGGTGATCCACCTGCCT 2658
Query 229 CGGCCTCCCAAAGTGTTGAGA----------------------------------------------------- 249
|.|||||||||||||.|||||
Sbjct 2659 CAGCCTCCCAAAGTGCTGAGATTACAGGGGTGAGTCACCGCGCCTGGCCAATGTTGTTGTTGTTTTTAAGACAG 2732
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2733 AATTTCACTCTTTGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGGCTCACCGCAACCTCCGCCTCCCAGG 2806
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2807 TTCAAGCGATTCTCCTACCTCAGCCCCCAGAGTAGCTGGGATTACAGGCATGTACCATCACACCCGGCTAATTT 2880
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2881 TTTGTATTTTAAGTAGAGAGGGGGTTTCTCCATGTTGGTCAGGCTGGCCTCGAACTCCCAACCTCAGGTGATCC 2954
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2955 GCCCACCTCGGCCTCCCAAAATGCTGGGATTACAGGGGTAAGCCACTGTGCCCGGCCGGTTATTTCTTTAAAAG 3028
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3029 GTAATCATTTGTCAAGAGTAAAACCCAGAAGCTCTGACAGGCCATAATTTCAGATCCTTTGGCTTGGGCAGTTT 3102
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3103 TGATTTTCCCCGTGTTTGCATGGCATGAAGTCTTCGTCCTTGTCACAGTAGCTTGGGATGACTCCCAGTCCACA 3176
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3177 TGGAAAACATCAGGGAGTGACAATCCAGCAAGAAATCCCTCGCTAGTTCCACACCTACGCACCGAGCGTCGGTG 3250
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3251 TGCCAGGCCCTGTGCTGGGCAGAGTGTGGTATGTCAGGGTGTGCCGGTTTTAGGTAACAAGACTCCACCACTGA 3324
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3325 GTGGCACCTGCCCTATTGCAAAGGAATCCAGTTCCTCCGGAATAACAGTCCCACTGTTAACCTGGTGCTACTGG 3398
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3399 GAAGTTCCACACAGTAATCTGAGCAGTGACTCATGGAAGGATGAGGAACGTTTGCTCCAGCTTCTCTCCCTTTC 3472
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3473 CAGCAAGGGCAGAGCTCCTAAAGCCAGGGGTTAGCACCTGGCCAGCTTATGTGGCAGATGGTCTCAGTTACAAC 3546
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3547 TTCGCTGCTTTCCCAAACTCCTGCAGCCCTCCTGAGTCCGACTTCCGTTGATAGCAAGGCACTGGGTGGCAGCA 3620
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3621 ACCTTTTTTCTAGTAGTTTTTTCCCAGCAGTTTTCCATTTCTCCACAGTATCCTTTTCATTTAGAGGAGCTTAA 3694
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3695 TAAATGCTTTTTAAAAAGTAACCCACGTGACGTAAAATTTTACAAGTTTTTGTGGCAAAATGATGCCCAGATAG 3768
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3769 TCACATTTAAGCAAATATTCAGCTTGATTCAGTGATTAACAGCAAATGGGTCTACGTGCTAACATGGCAGCACA 3842
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3843 TTCAACACATAACACATCACTCACATTGACGTCCACTGTCCCTGCACCTGCTACTTCAGGGGCACTGAGGCTCC 3916
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3917 TGTTCCAAGGCCTTACAAACCTATGTGGTGGCCTGCAGGGCAAAAGGAATTATCATTACAACTGGTTAGAGGTA 3990
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3991 GGAATTCAGAAAGAAATTGAGGAGGCCAAACACACGTCGTTTGAGGCTAAAGGCTTAAGACGCTTCTTACCCAA 4064
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4065 GAGTGACCTCAGAGTTTCACATCCCAGACAATCACACTGTGGTTGAGTGAAATCAAGTGCAGTTTTATTTAAGA 4138
Query 250 -------------------------------------------------------------------- 249
Sbjct 4139 ACTGGAAAGAATAATCAGTATCTGTGAAAGAAAATCCAATTTAGAATATTTAAATAAACATTTATGTA 4206
