Nucleotide Global Alignment
Description
- Query:
- TRCN0000472287
- Subject:
- XR_001746839.1
- Aligned Length:
- 7108
- Identities:
- 216
- Gaps:
- 6861
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGCTGGGATTACAGGCGTGAGCCACTGTGCCCAACCAGGTGTTCTTAAATATAATTTTTTATCTCCTTTCCTAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAAGAGGGGTTTTTAGAACTGTTTGCTTGGCAGGTGAAGAATCTGCACGTTGTGGTTCTTTATTACTGAATGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAATACCAGACTTTACCTTAGCTTTATTTGTTCCCCAGTTCAACGGAATTTAACCTTAGAATTTCCTAAAGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTTTCTAAAAGTTTTTTATTTCTCTAAGTGTCATAGTACTGCATTTATGAATCCCAAATTGGCTTCCACTGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATTTAAACTTGATATAAGATACAGGAAGATTATTTTGTCACCACCCTCTTTCTATTCCAAACACTATTTACAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGGAAACTTTAGTAAGAGAAGATATTTTGGAAAAGATTTTGTAACCAACTTACACTTGTGTCTGTTTTTGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTTTTGGTTTAAATTCAAGGGGAGGCCAAGCGTGATGGCTCATGCCTGTAATCCTAACACTTCGGGAGGCCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACGGGTGGACCGCTTGAGCTCCGGAGTTCCAGAGGAGCCTGGGCAACATGGTGAAACCCTGTCTCTACCAAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATACAAAAACATTGCCCAGATGTGGTGGCATGCACCTGTGGTCCCAGCTATTTGAGAAGCTAAGGTTGTAAAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAATCAACACTTAAGATTTTACTAAGAGATCATTCAACTTCAAATCTGAAGCACAAGAAGTCAGCAAAATTAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGGCTATCATTGATTTGAGAATGGATTTTCACTTACATTTTAAATTAAATTGCTAACACTACAAAGTGTTTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAAAACATGAACATTTCTGTTTTACTTCAGTTGTGAAGAGACTCTAATTTCCATCTCTGTTTAGAAATTCCTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATGTGCAAATATAGGTTCTTTGCAAGCAGAACCACCAAGTAGTCCTTGGCACACAGAATTTATAAACCTAAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAATATTGAATGGAAAACTTAGAGAACAGTTGGAATGGGAGATACCATTATCCCAAGTCCAATGGTTGGTTAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAAATAGCTTTTCGATTCTCTCCAAATTAAGCTCACACCAACAGTTTTGTATTGTGAGGCAGCTGGTTCTGTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTTTCCTCCCCTGCTCTGCTCCTTCTCTGTCCTTCTGTAGCTGCAAGCCTCAGGGGTTGACCCACGCAGGCTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCTCACTGATGTCCTTCTCTTGCTTTTGGTTGGATTTCGTCAGCAGGTGAAGCCCAGGGAGCAAAAAGAGGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTTGCCAGATTATTTCTACCTCCACGCCCTCCCTGCCTGTCAAGGACTGAGTCCCAGGAAGATGCCAGCTCCAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCTTTCCCGCTCTTGCCGTCTCAGGCCACTCTGGCTGGCCGCTGGGTCCCTCAACATCCCCTGTTGGTTCCTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TAGCCCAGCCTACACCGCTGGAAATAGGCCCTTTATGAGATTCTCTTCTAAATCCTAGAAGAGTGTACCCTCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTTCCTGAAGAATCCTGACAAGTATGTAAACATTACTTAATAATTGTTAGGTAAAAATACTATAAATATTAAAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTATAAGTAAATAAAAATATTTAATTTTACATAAGACAAAGCTAAAAATTTCAGTTTATAATTTTTAAACATAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACAATAAATTTCCCAGAAAGAAATTGCTGACTACCAACCAAATTTTCATTTTTATTTTTTAAATGTTGGAAAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTTGTCAGAAAGATTCTTATCAACCAATCAAATTGTGTTAGCAGTTGTGTTAGTAGTCACAAGGAAAATAATC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGTCATATTAGTTTTCTTACTATTGTTCATATTTTGTCTTTCAAAAATAGGTGTAATGTACAAATACTTCTTAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTAGATATGCTTAAATAAAACATTTCATATTGTATTGATTTGGGTATATTGTAGAAAATAAAAAGTTCCTCTTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAGCTTCCCTTCTTGTTAAAGAATAAATCATAAGTGTTAGAATTAACAGTTTCTTTTAAAGACTAACTTTATG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTAGACATGCTCACAGACACGTAGTACATTCTATGTCCTCGTACTTTAACCAAGATATCTGTGCTAGACGTGCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CACAGGCATGTCTCAGCTCGCAGCCTATGCCCTTTCCTTATTTGGGAATGTTTATTCCTTATTTGGAAATGTTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTACTTTTCTAAGTCCTTTCGTAAGCAACTTCATTTTTTTTCCTTTGTTTTTCTATTGCCTTTACCTGTTTAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAAGTTTTAAACTGTTAGCCAATCGGGTTTTAGTTTAGATTGTGAGGTCTGGCTCCAGCCAATGGAGACAGGAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACAGTAGCAGGGACAAACTGGGTAAGGGATAAAAATTGCTTCGCTCCATTGTTCCGGGGTGCTCTCGCCATTGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCAACTGCCATAAACACCCTTTCTGCAGAAAGCAAAAATGGCCTTGCTGAGAGAATTAAATTTATGTTCGAGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCTATTTCTTTGTGGCACTGGGGAACAAGCATTCTATTTCTAAATAAACATTTTTACGTATAACAGTACTGAAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATAACCATGGACTGTTTGCAAATTATATTGGAATCATGTAGACACAGCTTTAATAATGGATAATATAATTATTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTTTTTCTAGCCAAAAATCAGGAGCAGACTATGTATACAAGTCTGGAATGGAGGACTTTCCATTCTAGAAGAAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGTGGCCATTTTCAACTCTTCTTCCTTTTGAGACCTCACTAAAATTAGAGGAACAGAATTTAAAAATACATTA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CATCTCCATGATAAAGAGAACAGGAAAGGAAATATCAACAGACAAGGGGATTTGACAGATATTTTTGGAGGGAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAAACGGTGGAGCAGAGGTAATTAAGCCGATTGGAGAGAGGCTGTCCTGCAGACCGAGTGAGACAAGGTCCTGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CACTGGAGAGGCTGCTGCCTGGATCCCTCCCCCAACACAAGAAATCAGGAAATCACCACTCCTCTTGCCCCAGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCAGAGACTAGGTTTCTGTAGACATGGAAGGTAGAGGCTGCGGACCTGGACCCCAGACACAGGTGAGAGGAGAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCTTTGCGCTAAAGAGAGAGAGAGAGAGAAAAGGAGGTGGGGAAGAAGAAAGGAAAGAAAGGAGGAAGAGAGAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGCCAGGCGCGGTGGCTCACGTCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAACACAAAAAATTAGCCGGGCGTGGTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACGGCGTGAACCCGGGAGGCAGAGCTTGC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AGTGAGCCAAGATCGGGCCACTGCACTCCACCCTGGGTGACAGAGCGAAACAACGTCTCAGAAAAAAAGAAAGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAGAAAGGAGGAAGAGAGAAAAGGAGCGTGGAAAGAAAAGAAAATTTCAGGAGCTTCTACATTGGTTATGCCAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CAGAAACAGTTAAGCCATGGAAACTGAGTCACATACACGCTGTTTTTCTTCTCTGGTGCATGACCTTTGCTTCT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GACCTTTGTGTTGAGATGTTATGAATTAACCACCCTTCCTATTCTTCATTCAAACCTCAACTAAATGACATTGG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGATAGAGACCCTTACCTCTTTACGATGGATGTTAAGTAACTCCCATAGAGTATAGTCAATGGTGGCCAGCCAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTTGTGTGTGTGTGTTTTATATCTTATATTTAAAAAATGAAAAAAATGTTGTAATTCTGGCCAGATACGTGGCT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CACAACTGCAATCCCAGCACTTTGGGAGGCCAAGGTAGGCGGATCACTTGAGGCCAGAAGTTCGAGACCAGCCT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGCCAACAGGGTAAAACTCTGTGTCTACTAAAAATACAAAAAATTAGCCAGGCGGGCATGGTGGCGCACGCCTG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTATCCCAGCTGCTCGGATGACTGAGGCTTGAGAATCCCTTGAACCTGGGAGGTGGAGTTTGCAGTGAGCCAAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ATCATGCCACTGCCCTCCAGCCTGAGCAACAAAGCAAGACTTTGTCTCCGAAAAAAAAAGAGCATGTTGTAATT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CTGTTCAGCACCCCTGTTTTTTGCTTATATGAATGATCTTCACCTTTCCCCGCACTGAGGAGTGATGATCACCA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TTCTTTGGTGTCTGCTACCCTAACACTTGGCGCTTGAATAAACTCTTTTAAGTGGAGCCTGAGCCTTTTGATTA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TTTTAGGTTGACAGGAGGAAGGGAGGAAGGGTGGGTTAAAATTAAATCTGCATACTAAGCAATAATATCCTTGC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TGCTCTTCTTCAACTGTTTGTAGGTTATTTCTGCTCTCAGGCTTCTGTTCTACCCCTAACTCTCCTGGCTACCC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 AAAGGCCGGAGGTTATCTACTGGGGAAATCTCAAAAGACTGTAGAAAAAATGTCTCAAATTCTGGTTTTGGGAG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TCTTCCAAAAAAAAATTTTTTTTAATTTGGCTTGCCTCTTGAATATCCTATAGAGAAGTCCCAAACTGACAAAC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 CTGGGCTGTCCTCCCAGATGCTCTACTGAGCTGTCAGTCTCTCCCTCTGGAATGGGAATAGAGCACCAAGCATA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 ACCTGTTATTTGAAGAAAGGCTGCTACACTACACACGGACCCAAATGAACAAATATCAGGAGAACAGAAGTTAG 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GGGAAACAGAAGTGATGAAGAGAACAGAATAAAAGTTTTATTTTAAAATTATTATTATTATTATTATTATTATT 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 ATTATTTGAGACCAAGTCTCACTGTGTCGCCCAGGCTGGAGTGCAATGGCATGATCTTGGCTCACTGCAAACTC 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TGCCTTCTGGGTTCAAGCAATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGTTACCCGCCACCAAGC 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 CCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGACTGGTCTCAAACTCCTGACCT 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 CAAGTAATCCACCTGCCTCAGCATCCCAAAGCACTAGGATTACAGGCATGAGCCACCGCACCTGGCCAGAATAA 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 AACTTTTAATATCTTTTATTAACACCGCACCCAGCCAGAATAAAACTTCTAAAATCTTTTATTACTATCATCAG 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 ATAAAATAAGACATTACATTCATGAAACAGAACAGGTATTAGAATATAAGAGAGAAGAAAATCCTCAAACAAAA 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 TTGTGGCAGCTGAACTAAAAACATCAAATAAGGATTGGAGTGTAATATTAAAGAAATTTCCCAGGAAGCAGAAC 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 AAAAAGAAAGTAAAATAGAAAAGGATAATAGAGCAAGTGCAATTAATTCAGAGAATCAATCCAGAAGGCCCTGA 5328
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5329 TACCTGACTGAATAGGGTTCCAGAAAGAGGAACAGAGAAAAAGGATGTGAAGAGTTGCATTGATAATAGTACTA 5402
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5403 CTAACACTATTTTTTGTTCTTTGTCTTCAAGAAAACCTCTCAGAGTTGCAGTGTATGAGTCTCTGGATTGAAAG 5476
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5477 GGCTCAATAGATGCCCAGCATAACGATGAAGAGGACCCACATCTAGACATATATTGGCCTGAAATTTTCATGTA 5550
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5551 TTTGGGATCAAGAGAAAATCCTGAAAGCTTGTAAATTAATGCTGTTCAATATGGTGGTCATTAGCCACGGCTGA 5624
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5625 CTGTTCAGCACTGGAGATGTGGCCACTCTGAATGGAGATGTGCTGTAAGTGTAAAATAGACACTGAATTTTGGT 5698
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5699 GGGCTCAGTAGAAAAAAAAAGAGTAAAATGTCTCATTAATATTTTTCATTTTGAAAACATGTTGAAATGATTTT 5772
Query 1 -----------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTG 33
||||||||||.||||.|.|||||||||||||||
Sbjct 5773 GTATATATATATTTTTTTTAATTAATTTTTTTTTTTTTGAGATGGAGTCTCACTCTATGGCCCAGGCTGGAGTG 5846
Query 34 CAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAG 107
||||.||...||||.||||||||||||||||..||||||.|||||||||.|||||.||||||||||||||.|||
Sbjct 5847 CAGTAGCGCAATCTTGGCTCACTGCAACCTCCACCTCCCTGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAG 5920
Query 108 TAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCAT 180
|||||||||||..||.|||||.||||.|.||||.||||| ||||||||||||.||.|||||||.||||..||||
Sbjct 5921 TAGCTGGGACTGCAGGCATGCGCCACTATGCCCTGCTAATTTTTGTATTTTTAGTAGAGACGGAGTTTCACCAT 5994
Query 181 GTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA---- 249
.||.|||||||||||||||||||||||||||| ||||||.| |||||||||||||||||||||.||.||
Sbjct 5995 ATTGGTCAGGCTGGTCTTGAACTCCTGACCTC--GTGATCTACCCACCTCGGCCTCCCAAAGTGCTGGGATTAC 6066
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6067 AGGCCTGAGCCACCACGCCTGGCCGAAATAATATATTTTTTAAACATTGGGCTAAATATAACATATTATTACAA 6140
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6141 CTACTTCCAGTTGTTTCTTTTTATTTTAAGGTGGCTCCTGGAAAATTTTAGATGACATAGACGGTTTCTGTTCT 6214
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6215 GTGTCTGTTAGACGGTGCTCTGCAGAGAAGCAGACAGGTCATGCATAAGGACACTGAGGCCAGAATGATATCTG 6288
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6289 ACCTTCAGCAGCAGCTCTAGGAAACTGAAGAAAAATGATCCCCCTATTCAGAGAGAAATAGTTTTCAACCTTAG 6362
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6363 TAGTCTACATTCTGGCAAACTTTCAGTCAACTGAAAGACAGTTAGAGACATGCAAGCACACAAAAGTTTACCTT 6436
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6437 CTTTGCTGTCTCCTTGAACGTTCCTGAAGGAAGTACCCCAGGAAATAAACTTGTAAACCAATGGCATGGAAGGC 6510
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6511 ATGGGATTTAAAAGCAGGATGTCCAGTATAGGACTCGGAGCAAGTTGTGCAGCAGGTCCAGGAAGCAGACAAGC 6584
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6585 CCGTGCAGAACAGGAAGTCAGGGGGCTCAGTGGGAAGTCATGGCACCAGTGGATTTGCTGACATAGGGAGTCTT 6658
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6659 CTGGCTCATTGGAAGACACGTATGTAGACAACAAAGTTATTTTTTGAGAGGTGATAATTTAAGAAAAAAGTTGT 6732
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6733 ACTCTTCCTGGCTCATGTGAACAGTATCTATATGACACAAATAATAATGTGAACTCAAAGACTGTGTGGTATGC 6806
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6807 TTACACCAGGGGAATGGGGGAGGGAGAGCAAAGTGCACTTGAGTTAGATAACATCTGTCAAGACAGGGAGAAAA 6880
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6881 AAGATAATGTCTAAAATAAATAACAGCACATGCATACTCCTTAGGAATTGGAAGGTAAATGGCAGAAGAAATGG 6954
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6955 CTTAACAATTTGTACGTGGTTTCTTGTGACTTCTTATGACTGTATAAGACCAGGGAGCAATAGGGAGGGGAGGC 7028
Query 250 -------------------------------------------------------------------------- 249
Sbjct 7029 ACAAGGGATGCTATTTTGTTTCTATTACTATTTGATTTTGTAAAACTATACACATCAATTAAAATGATAAATAT 7102
Query 250 ---- 249
Sbjct 7103 TATA 7106
