Nucleotide Global Alignment

Description

Query:
TRCN0000472464
Subject:
XM_006501057.1
Aligned Length:
1275
Identities:
1033
Gaps:
123

Alignment

Query    1  ATGCAAGTCTCCATA-----GCCTGCACAGA------------------------GCACAATT----TGAAGAG  41
            |||||  |||..|||     |||||..||||                        ||.|||.|    ||||   
Sbjct    1  ATGCA--TCTTTATAAACCTGCCTGTGCAGACATGCCCAGTCCAAAGCTGGGTCTGCCCAAATCCAGTGAA---  69

Query   42  TCGG------AATGGTGAGGACCG-----ACTT----CTGAGCAAG---CA--------GAGCTCCACCGCCC-  88
            ||.|      ||||       |||     ||||    ||||.||||   ||        |||| |..|.|.|| 
Sbjct   70  TCAGCCCTAAAATG-------CCGGCGGCACTTAGCACTGACCAAGACTCAGCCTCAGGGAGC-CTGCTGGCCT  135

Query   89  ------CCAATGTGGTAAAC-GCAGCCCGGGCCAAATTCCGCACGGTCGCTATCATCGCGCGCAGCCTGGGGAC  155
                  |||| ||||  ||| .|||...||   ||||                           ||||||.||.
Sbjct  136  GTTAGACCAA-GTGG--AACTACAGAATGG---AAAT---------------------------GCCTGGAGAA  176

Query  156  GTT--CACGCCTCAGCATCACATTTCTCTCAAAGAGTCCACC---GCAAAGCAGACTGGCATGAAATATAGGAA  224
            |||  .||||.||  |||....||||..|.||.||..|||||   ||||   ||||.||||||..|||.|||||
Sbjct  177  GTTTCTACGCGTC--CATGGAGTTTCATTGAAGGAAACCACCAAGGCAA---AGACAGGCATGGCATACAGGAA  245

Query  225  TCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGGGTGACATTTGGAGGTCAAATTTCAG  298
            ||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  246  TCTTGGGAAATCAGGACTCAGAGTTTCATGCTTGGGTCTTGGAACATGGGTGACATTTGGAGGTCAAATCTCAG  319

Query  299  ATGAGGTTGCTGAACGGCTGATGACCATCGCCTATGAAAGTGGTGTTAACCTCTTTGATACTGCCGAAGTCTAT  372
            |||||||||||||||||||||||||.||.|||||.||||||||.|||||.|||||.||.||.||.||.||||||
Sbjct  320  ATGAGGTTGCTGAACGGCTGATGACAATTGCCTACGAAAGTGGAGTTAATCTCTTCGACACAGCTGAGGTCTAT  393

Query  373  GCTGCTGGAAAGGCTGAAGTGATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAGGAGGTCCAGTCTGGTCAT  446
            ||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||..|||||||
Sbjct  394  GCTGCTGGGAAGGCTGAGGTGATTCTGGGAAGCATCATCAAGAAGAAAGGCTGGAGGAGGTCCAGCTTGGTCAT  467

Query  447  AACAACCAAACTCTACTGGGGTGGAAAAGCTGAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATTGAAGGAT  520
            .||||||||||||||||||||||||||||||||.||||||||.||.||||||||||||||.||.|||||||||.
Sbjct  468  CACAACCAAACTCTACTGGGGTGGAAAAGCTGAGACAGAAAGGGGACTGTCAAGAAAGCACATCATTGAAGGAC  541

Query  521  TGAAGGGCTCCCTCCAGAGGCTGCAGCTCGAGTATGTGGATGTGGTCTTTGCAAATCGACCGGACAGTAACACT  594
            ||||.||||||||||||||||||||.||.||.||.|||||||||||||||||||||||.||.|||||.||||||
Sbjct  542  TGAAAGGCTCCCTCCAGAGGCTGCAACTGGAATACGTGGATGTGGTCTTTGCAAATCGCCCAGACAGCAACACT  615

Query  595  CCCATGGAAGAAATTGTCCGAGCCATGACACATGTGATAAACCAAGGCATGGCGATGTACTGGGGCACCTCGAG  668
            ||||||||||||||.||.|||||||||||.||.|||||.||||||||||||||.||||||||||||||||||||
Sbjct  616  CCCATGGAAGAAATCGTTCGAGCCATGACGCACGTGATCAACCAAGGCATGGCCATGTACTGGGGCACCTCGAG  689

Query  669  ATGGAGTGCTATGGAGATCATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATGATCCCACCGGTCTGTGAAC  742
            .|||||.||.||||||||||||||||||||.|||||.|||.|.||||||||.||||||||.||.||||||||.|
Sbjct  690  GTGGAGCGCGATGGAGATCATGGAAGCCTACTCTGTCGCACGGCAGTTCAACATGATCCCGCCTGTCTGTGAGC  763

Query  743  AAGCTGAGTACCATCTTTTCCAGAGAGAGAAAGTGGAGGTCCAGCTGCCAGAGCTCTACCACAAAATAGGTGTT  816
            |||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||.||||||||.|||
Sbjct  764  AAGCTGAGTACCATCTTTTCCAGAGAGAGAAGGTGGAGGTCCAGCTGCCGGAGCTCTACCATAAAATAGGAGTT  837

Query  817  GGCGCAATGACATGGTCTCCACTTGCCTGTGGAATCATCTCAGGAAAATACGGAAACGGGGTGCCTGAAAGTTC  890
            ||.|||||||||||||||||||||||.||||||||.||.|||||||||||.|||||.||||||||.||||||||
Sbjct  838  GGTGCAATGACATGGTCTCCACTTGCTTGTGGAATTATTTCAGGAAAATATGGAAATGGGGTGCCAGAAAGTTC  911

Query  891  CAGGGCTTCACTGAAGTGCTACCAGTGGTTGAAAGAAAGAATTGTAAGTGAAGAAGGGAGAAAACAGCAAAACA  964
            .||.|||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct  912  TAGAGCTTCACTGAAGTGCTACCAGTGGTTGAAGGAAAGAATCGTAAGTGAAGAAGGGAGAAAACAGCAAAACA  985

Query  965  AGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAGCTGTTGCGTGGTGCCTG  1038
            ||||.||||||||.||.|||||.||.|||||.|||||.|||||.|||||||||||.|||||.||||||||||||
Sbjct  986  AGCTGAAAGACCTCTCTCCAATCGCTGAGCGCCTGGGGTGCACGCTACCTCAGCTGGCTGTGGCGTGGTGCCTG  1059

Query 1039  AGAAACGAAGGTGTGAGTTCTGTGCTCCTGGGATCATCCACTCCTGAACAACTCATTGAAAACCTTGGTGCCAT  1112
            |||||.||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1060  AGAAATGAGGGTGTGAGTTCTGTGCTCCTGGGATCATCCACTCCGGAACAACTCATTGAAAACCTTGGTGCCAT  1133

Query 1113  TCAGGTTCTCCCAAAGATGACATCACATGTGGTAAATGAGATTGATAACATACTGCGCAACAAGCCCTACAGCA  1186
            ||||||.|||||.|||||||||||.||.|||||.||.|||||||||||||||||||||||||||||||||||||
Sbjct 1134  TCAGGTCCTCCCTAAGATGACATCTCACGTGGTGAACGAGATTGATAACATACTGCGCAACAAGCCCTACAGCA  1207

Query 1187  AGAAGGACTATAGATCA  1203
            |.|||||||||||||||
Sbjct 1208  AAAAGGACTATAGATCA  1224

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