Nucleotide Global Alignment

Description

• Query: TRCN0000473387
• Subject: NM_001267625.1
• Aligned Length: 1189
• Identities: 914
• Gaps: 173

Alignment

Query    1  ATGGCGACTGTCATTCACAACCCCCTGAAAGCGCTCGGGGACCAGTTCTACAAGGAAGCCATTGAGCACTGCCG  74
            |||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGACTGTCATTCACAACCCCCTGAAAGCGCTTGGGGACCAGTTCTACAAGGAAGCCATTGAGCACTGCCG  74

Query   75  GAGTTACAACTCACGGCTGTGTGCAGAGCGCAGCGTGCGTCTTCCCTTCCTGGACTCACAGACTGGGGTGGCCC  148
            |||.||||||||..|||||||.||||||||.|||||||||||.||||||||||||||.||||||||||||||.|
Sbjct   75  GAGCTACAACTCGAGGCTGTGCGCAGAGCGGAGCGTGCGTCTCCCCTTCCTGGACTCGCAGACTGGGGTGGCTC  148

Query  149  AGAACAACTGCTACATCTGGATGGAGAAGAGGCACCGAGGCCCAGGCCTTGCCCCGGGCCAGCTGTATACATAC  222
            |||||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||.||||.||||||
Sbjct  149  AGAACAACTGCTACATCTGGATGGAGAAGAGGCACCGCGGCCCAGGCCTCGCTCCGGGCCAGTTGTACACATAC  222

Query  223  CCTGCCCGCTGCTGGCGCAAGAAGAGACGACTGCACCCACCTGAAGATCCAAAACTGCGGCTGCTGGAGATAAA  296
            ||||||||||||||||||||||||.|||||.||||||||||.||.||.||||||||.||.||.|||||.||.||
Sbjct  223  CCTGCCCGCTGCTGGCGCAAGAAGCGACGATTGCACCCACCAGAGGACCCAAAACTACGACTCCTGGAAATCAA  296

Query  297  ACCTGAAGTGGAGCTTCCCCTGAAGAAGGATGGGTTCACCTCAGAGAGCACCACGCTGGAAGCCTTGCTCCGTG  370
            |||.|||||.||.||.|||||||||||.|||||.||.|||||.|||||.|||||.||||||||||||||.||.|
Sbjct  297  ACCCGAAGTAGAACTGCCCCTGAAGAAAGATGGATTTACCTCTGAGAGTACCACACTGGAAGCCTTGCTTCGCG  370

Query  371  GCGAGGGGGTTGAGAAGAAGGTGGATGCCAGGGAGGAGGAAAGCATCCAGGAAATACAGAGGGTTTTGGAAAAT  444
            |||||||.||.||||||||||||||||||||.||.|||||||||||||||||.|||||||||||||||||||||
Sbjct  371  GCGAGGGAGTAGAGAAGAAGGTGGATGCCAGAGAAGAGGAAAGCATCCAGGAGATACAGAGGGTTTTGGAAAAT  444

Query  445  GATGAAAATGTAGAAGAAGGGAATGAAGAAGAGGATTTGGAAGAGGATATTCCCAAGCGAAAGAACAGGACTAG  518
            ||||||||.||||||||||||||||||||.||||||||||||||.|||.||||||||||.|||||||||||.||
Sbjct  445  GATGAAAACGTAGAAGAAGGGAATGAAGAGGAGGATTTGGAAGAAGATGTTCCCAAGCGCAAGAACAGGACCAG  518

Query  519  AGGACGGGCTCACGGCTCTGCAGGGGGCAGGAGGAGGCACGACGCCGCCTCTCAGGAAGACCACGACAAACCTT  592
            |||||||||||.||||||||||||.||.|||||||||||.||.|||||||||||||||||||||||||||||.|
Sbjct  519  AGGACGGGCTCGCGGCTCTGCAGGCGGAAGGAGGAGGCATGATGCCGCCTCTCAGGAAGACCACGACAAACCCT  592

Query  593  ACGTCTGTGACATCTGTGGCAAGCGCTACAAGAACCGACCGGGGCTCAGCTACCACTATGCTCACACTCACCTG  666
            |||||||.|||||||||||||||||||||||||||||.||.||.||||||||||||||.|||||.|||||||||
Sbjct  593  ACGTCTGCGACATCTGTGGCAAGCGCTACAAGAACCGGCCAGGACTCAGCTACCACTACGCTCATACTCACCTG  666

Query  667  GCCAGCGAGGAGGGGGATGAAGCTCAAGACCAGGAGACTCGGTCCCCACCCAACCACAGAAATGAGAACCACAG  740
            ||||||||||||||.||.|||||.||||||||||||||.||.||||||||||||||||||||||||||||||||
Sbjct  667  GCCAGCGAGGAGGGAGACGAAGCCCAAGACCAGGAGACCCGATCCCCACCCAACCACAGAAATGAGAACCACAG  740

Query  741  GCCCCAGAAAGGACCGGATGGAACAGTCATTCCCAATAACTACTGTGACTTCTGCTTGGGGGGCTCCAACATGA  814
            .||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCCCAGAAAGGACCAGACGGGACAGTCATTCCTAATAACTACTGTGACTTCTGCTTGGGGGGCTCCAACATGA  814

Query  815  ACAAGAAGAGTGGGCGGCCTGAAGAGCTGGTGTCCTGCGCAGACTGTGGACGCTCTGCTCAT-----TTG---G  880
            ||||||||||||||.||||||||||||||||||||||.|||||||||||||||||||.||||     |||   |
Sbjct  815  ACAAGAAGAGTGGGAGGCCTGAAGAGCTGGTGTCCTGTGCAGACTGTGGACGCTCTGGTCATCCAACTTGCCTG  888

Query  881  GAG--------GA----GA---AGGCAGGAAGGAGA-----AGGAGGCAGCGGCCGCAGCACGTACCACGGAGG  934
            .||        ||    ||   ||||||..|  |||     |.|.|||||.|              ||..||| 
Sbjct  889  CAGTTCACTCTGAACATGACTGAGGCAGTTA--AGACCTACAAGTGGCAGTG--------------CATAGAG-  945

Query  935  ACTT----ATTCGGT-TCC--------ACGTC--AGAAAGTGACACGTCAA------CTTTCCGCGGCTTTGAT  987
               |    ||.|.|| |||        ||.||  ||||.|    |||.|.|      |||       ||.||||
Sbjct  946  ---TGTAAATCCTGTATCCTGTGTGGGACCTCGGAGAACG----ACGACCAGCTACTCTT-------CTGTGAT  1005

Query  988  GAGGACGAT-TTGGAAGAGCCTCGCTCCTGTCGAGGAC---------GCCGCAGTGGCCGGGGTTCGCCCACAG  1051
            ||...|||| .|||      ||..|.|.|||     ||         .||.|||||||     |..||||.|||
Sbjct 1006  GACTGCGATCGTGG------CTATCACATGT-----ACTGTTTAAATCCCCCAGTGGC-----TGAGCCCCCAG  1063

Query 1052  CAGATAAAAAGG-----GCAGTTGC-------------------------------------------------  1071
                    ||||     |.||.|||                                                 
Sbjct 1064  --------AAGGAAGCTGGAGCTGCCATTTATGCTGGGAGCTGCTCAAAGAGAAAGCATCAGCCTTTGGCTGCC  1129

Query 1072  -----  1071
                 
Sbjct 1130  AGGCC  1134