Nucleotide Global Alignment
Description
- Query:
- TRCN0000473640
- Subject:
- XR_946721.2
- Aligned Length:
- 3183
- Identities:
- 1561
- Gaps:
- 1621
Alignment
Query 1 ---------------------------------------------------------------------ATGGA 5
|||||
Sbjct 1 CTCGCCGCTTGTGTGGCTCGCTGGCTGCGTGGCTCGGTTCTTGTGAGCGAAGCTTTGTCCGGTTCGGCAATGGA 74
Query 6 CG------------------------GAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAAC 55
|| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGGTATGTAATCGGGCCGGCGAGAAGAATCGTCACTGAGGTTGCAGTTGGCGTGAAGAGAGGATCTGACGAAC 148
Query 56 TACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGAT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TACTCTCAGGCAGTGTTCTCAGTAGTCCGAACTCTAATATGAGCAGCATGGTAGTTACAGCCAATGGTAATGAT 222
Query 130 AGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGG 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGTAAAAAATTTAAAGGAGAAGATAAAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTACCTGG 296
Query 204 GGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAG 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAAGTAACAGAAACTGAAGTTATTGCTTTAGGCTTACCTTTTGGTAAGGTGACCAACATCCTTATGCTGAAAG 370
Query 278 GAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTG 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAAAAAATCAGGCATTTTTGGAACTAGCAACCGAGGAAGCAGCTATTACTATGGTTAATTACTATTCTGCTGTG 444
Query 352 ACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACACCTCATCTTCGTAACCAACCAATATATATCCAGTACTCGAATCACAAAGAACTAAAGACAGATAATACATT 518
Query 426 AAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCA 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAACCAACGTGCTCAGGCAGTTCTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCTTAGTGGCACCA 592
Query 500 CAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCT 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGTTAGCGAGAGTGCAGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCCT 666
Query 574 GTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAA 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTAACACTTGATGTTCTTCACCAAATATTTTCTAAGTTTGGTGCTGTATTGAAGATAATCACATTTACAAAAAA 740
Query 648 TAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTC 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAACCAGTTTCAAGCTTTGCTCCAGTATGGTGATCCAGTAAATGCTCAACAAGCAAAACTAGCCCTAGATGGTC 814
Query 722 AGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAAC 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAATATTTATAATGCCTGCTGTACCCTAAGGATTGATTTTTCCAAACTTGTGAATTTGAATGTAAAATACAAC 888
Query 796 AATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTAT 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AATGATAAAAGTAGGGATTATACTCGACCTGATCTTCCATCTGGGGATGGACAACCTGCATTGGACCCAGCTAT 962
Query 870 TGCTGCAGCATTTGCCAAGGAGACATCCCTCTT---------------AGCTGTTCCAGGAGCTCTGAGTCCTT 928
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 963 TGCTGCAGCATTTGCCAAGGAGACATCCCTCTTAGGGCTTCCTGTTGCAGCTGTTCCAGGAGCTCTGAGTCCTT 1036
Query 929 TGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCT 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGAGTCTCAGCT 1110
Query 1003 GGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAATGAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCTCTT 1076
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGTGGCAATACAGTCCTGTTGGTTAGCAATTTAAATGAAGA--------------------------------- 1151
Query 1077 CGGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTTATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTG 1150
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 -GGTGTTTATGGAGATGTGCAGCGTGTGAAGATTTTATACAATAAGAAAGACAGCGCTCTAATACAGATGGCTG 1224
Query 1151 ATGGAAACCAATCACAACTTGCCATGAATCATCTTAATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACT 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1225 ATGGAAACCAATCACAACTTGCCATGAATCATCTTAATGGACAGAAAATGTATGGAAAAATTATTCGTGTTACT 1298
Query 1225 CTGTCTAAACATCAGACTGTACAGCTACCTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAA 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 CTGTCTAAACATCAGACTGTACAGCTACCTCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGATTTTGGTAA 1372
Query 1299 TTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTC 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 TTCCCCATTGCATCGTTTTAAGAAACCTGGATCCAAAAATTTTCAAAACATTTTTCCTCCTTCTGCCACCCTTC 1446
Query 1373 ACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGGATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTG 1446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 ACCTATCTAATATCCCTCCATCAGTAGCAGAAGAGGATCTACGAACACTGTTCGCTAACACTGGGGGCACTGTG 1520
Query 1447 AAAGCATTTAAGTTTTTTCAAAGAGATCACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCA 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1521 AAAGCATTTAAGTTTTTTCAAAGAGATCACAAAATGGCTCTTCTTCAGATGGCAACAGTGGAAGAAGCTATTCA 1594
Query 1521 GGCCTTGATTGATCTTCATAATTATAACCTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCAAAGTCAACAA 1594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1595 GGCCTTGATTGATCTTCATAATTATAACCTTGGAGAAAACCATCATCTGAGAGTGTCTTTCTCCAAGTCAACAA 1668
Query 1595 TT------------------------------------------------------------------------ 1596
||
Sbjct 1669 TTTAAAAATGGGAAGATGAAGATTGGGGGTGAATCACATTGTTCAATGTCATCACCTATTTGACTGTTCAGAAA 1742
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1743 AGTGGGGACCAGAGTTTGATTTTTTTTGTTTTTGTTTTTTTGGGGTTTCTTTTTTTTTTCCATGCTGTTATCAT 1816
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1817 TCCTTGGTTATAAAATGAAATGGCATATGTAAAGGCAGAGTTGTTAACTGCTATATTTCATCTGTTCTATAGGG 1890
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1891 AAGCCATTTTGTCTGTTTAAAATTTCAGTTTAATTTTGCTTTTTTTTTTTTTTTTTTTTTCCTTTCAACTTAGT 1964
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1965 TGACATACGTGCCTTAAAAAGGAAAACTAGTGTTGCTATTGTGCATTTACTAGAAAAAAGGAATTGGTTGTTTA 2038
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2039 GGGCACACTGTTATATGGGAATTAAAATATGTTTAGGCAGGGGTGTGTAAAAAGGTTAAGTTTTTGTTTCTCCT 2112
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2113 GCTTGGAACTTATTTTGAATTACTGGCTTGTCACCTTTTTTTCTATTTAATCAAATAAGATACATGATATTGAA 2186
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2187 AGAATAAAGCAGCATTTTTAGTTTTTACTACCTTAGGCTTTATTGCTTTGAAAACAACATTGGCCTTTTGTATC 2260
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2261 TCACAATTCTGGTCTAGATTCAGTTATGAATGTAGGCATTAGTTAAAATTAACAAGATGCAGAGTATTAATTTC 2334
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2335 TTAAGACAACAAAGTGATTTCTGTAAGTTTGAGCCCTATGTGGAAAGCATTGTGGAATCTTAACCTTTTCGTAC 2408
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2409 ACACTCTTGTGGGACGTATCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGCTGAATATTTTTCGTAG 2482
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2483 ATGTTTTTGAAGTTGACATGACTTACGTGCATTTAAATATATATTGCCATCCTTAGTTTGTAATTAAGATTTGG 2556
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2557 AATATGGTTGTGGATTTCTGAGCATGTGCAGACTGGTCTAGCTAGTTCAGGAACTGGTGCATGTATTTTTCAAA 2630
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2631 GATAAAGAAAGTGTACTGCGAAAATATGCAGGAAGATTAATTTTGTGGCAGTTTTCTAAAACTGACAACCAGGT 2704
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2705 GGGACCAAAGTTTATGTGCCTTTAGTCTTAATTTACCTTGCATTGTAATATTCAGTTTTAATAAATCTTCAAAA 2778
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2779 TATTTTGTATTTAGGAATAGATCTGACTTTAATAAAAACATGGCTCAGAATCTACAGGTCAAATTAATTTGAAC 2852
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2853 AGTTCTTGTCAATCCGAATTGTTGATTCTGTTTAAATGACCAATACTTTTTGAAATTGATGTACTTAGTTTCAA 2926
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2927 GATTCATAGATTCTGTTATCTATGTAGACAGAATGGTCATGTATATTTTCTATTAGTTGAGTTTTTACATCTTT 3000
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3001 AGAAATGTAAAATTCAGTATAGTTTGAAAGCGGCACAATTAAAAATTAATTTTCTAACAAAGTTGGGAGGTTTG 3074
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 3075 ATGGTTGTTTAATTTCATTTTGTGTGTACTCTGCTTACCCCTGTAGCATGCTCAATAAACACTTCTGTAGCTCT 3148
Query 1597 - 1596
Sbjct 3149 A 3149
