Nucleotide Global Alignment
Description
- Query:
- TRCN0000474221
- Subject:
- NM_001368041.1
- Aligned Length:
- 2110
- Identities:
- 1455
- Gaps:
- 638
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTTGTCAGCACATTTACCGATATGGACACTTTTCCCAATAATTTTCCTCCTGGTGGAGACAGTGGATTGAC 74
Query 1 -------------------------ATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATC 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGTTCTCAGTCGGAGTTCCAGAAAATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATC 148
Query 50 AGACACTGAAGGCTGAACACACAAGGTTGCAGAATGAACATGTAAAGTTACAAAATGAACTCAAGCACCTGTTT 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGACACTGAAGGCTGAACACACAAGGTTGCAGAATGAACATGTAAAGTTACAAAATGAACTCAAGCACCTGTTT 222
Query 124 AATGAAAAGCAAACTCAGCAGGAAAAACTTCAGCTCCTGCTTGAAGAACTAAGAGGAGAATTAGTAGAGAAAAC 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AATGAAAAGCAAACTCAGCAGGAAAAACTTCAGCTCCTGCTTGAAGAACTAAGAGGAGAATTAGTAGAGAAAAC 296
Query 198 TAAAGATTTAGAAGAAATGAAACTGCAGATATTAACTCCACAAAAATTGGAATTGCTAAGAGCCCAAATACAAC 271
||||||||||||||||||||||||||
Sbjct 297 TAAAGATTTAGAAGAAATGAAACTGC------------------------------------------------ 322
Query 272 AAGAATTAGAAACTCCAATGAGAGAACGTTTTAGGAATCTAGATGAAGAGGTAGAAAAGTATAGAGCTGTATAT 345
Sbjct 323 -------------------------------------------------------------------------- 322
Query 346 AATAAGCTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGTATGCACGTATTTT 419
Sbjct 323 -------------------------------------------------------------------------- 322
Query 420 AGATGAAGGAAAAATAAAATATGAATCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAACTACGTAACCAGC 493
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 323 -----------------------------AGATTGCAAGACTGGAGGAAGATAAAGAAGAACTACGTAACCAGC 367
Query 494 TGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTATTTGTGTCAA 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 TGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTATTTGTGTCAA 441
Query 568 AAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCAGGTGGAAAA 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 AAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCAGGTGGAAAA 515
Query 642 TGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTGAAAAACAAT 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 TGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTGAAAAACAAT 589
Query 716 CAGCTAATTTACGGGCAGAACGCTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTTTTAATTAAT 789
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 CAGCTAATTTACGGGCAGAACGTTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTTTTAATTAAT 663
Query 790 AAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACT 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 AAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACT 737
Query 864 GGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATAAGATTCAAA 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 GGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATAAGATTCAAA 811
Query 938 GTGAACTGGATGGATTACAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAAAGTGCTCTTAGTA 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 GTGAACTGGATGGATTACAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAAAGTGCTCTTAGTA 885
Query 1012 GAAAAGGATCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGTGGTATTACA 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 GAAAAGGATCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGTGGTATTACA 959
Query 1086 AGATGAAAAGTTAGAACTCGAGAACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACATGATGTCTGGAGGC 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 AGATGAAAAGTTAGAACTCGAGAACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACATGATGTCTGGAGGC 1033
Query 1160 AATCTGAAAAGGATCAGTATGAAGAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCACCAGGAAGGAGCTT 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 AATCTGAAAAGGATCAGTATGAAGAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCACCAGGAAGGAGCTT 1107
Query 1234 CAGAGTGTTAGGTTAAAACTTCAGCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAAAAAATGAAAATTC 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 CAGAGTGTTAGGTTAAAACTTCAGCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAAAAAATGAAAATTC 1181
Query 1308 TGACCTAAAACAGCAAATCAGTAGTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAGAATGACTTGCTGA 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 TGACCTAAAACAGCAAATCAGTAGTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAGAATGACTTGCTGA 1255
Query 1382 ATTCAAACCAAATGCTGAAGGAAATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAGAAGCCAAGCTGAA 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 ATTCAAACCAAATGCTGAAGGAAATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAGAAGCCAAGCTGAA 1329
Query 1456 AAAGCGCAACTAGAAGCTGAAAAGACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAAAGCATAAGCTTCA 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 AAAGCGCAACTAGAAGCTGAAAAGACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAAAGCATAAGCTTCA 1403
Query 1530 TGAGCGTATCACAGACAGAGAAGAAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCTGCAATTGCCCAGA 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 TGAGCGTATCACAGACAGAGAAGAAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCTGCAATTGCCCAGA 1477
Query 1604 AAAAG---------CTTGA---------------------ACAGGA-----------TCTT------------- 1623
||||| |||.| |||.|| ||||
Sbjct 1478 AAAAGAGAAAATCTCTTCATGAAAACAAATTGAAAAGACTACAAGAGAAAGTAGAAGTCTTGGAGGCAAAGAAA 1551
Query 1624 ---GAGTTGG-----------------------------GATG-CCCTTCTG-TGACTGATAC----------- 1652
||.|||| .||| .||||.|| .|||| ||||
Sbjct 1552 GAAGAATTGGAAACAGAAAATCAGGTCTTAAATAGACAAAATGTTCCTTTTGAAGACT-ATACAAGGCTTCAAA 1624
Query 1653 --------------ATACAGAGA-----------------GAGTGTA-------TTCCCCCCA--CCCCCATTG 1686
||||||||| .|||.|| ||||...|| ||.|||
Sbjct 1625 AAAGACTAAAAGATATACAGAGAAGACATAATGAATTTCGAAGTCTAATTTTGGTTCCTAACATGCCTCCA--- 1695
Query 1687 AAGAGAG-ATCT--------------CTTGAAG----------------------------------------- 1704
|.|| |||| |||..||
Sbjct 1696 ---ACAGCATCTATCAATCCTGTTAGCTTTCAGTCATCAGCCATGGTTCCAAGCATGGAACTACCATTTCCTCC 1766
Query 1705 -------------------------------------------------------------------------- 1704
Sbjct 1767 TCATATGCAGGAGGAACAACATCAAAGGGAACTCTCTCTACTTCGCAAAAGACTAGAAGAACTGGAAACAACAC 1840
Query 1705 -------------------------------------- 1704
Sbjct 1841 AAAGAAAACAACTAGAGGAACTTGGATCTTCCGGAGAA 1878
