Nucleotide Global Alignment
Description
- Query:
- TRCN0000474301
- Subject:
- XR_002956446.1
- Aligned Length:
- 4170
- Identities:
- 266
- Gaps:
- 3895
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTACCAGACAAGAAGACAAGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCA 296
Query 1 -------------------------------------------------------------------ATGATCT 7
|||||||
Sbjct 297 AAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCT 370
Query 8 TTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCCTTCCTGAGATCCGTGCTATCTGCATTGAG 81
|||||||||||||||||||||||||||||||||||
Sbjct 371 TTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGC--------------------------------------- 405
Query 82 GAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACCGACAGCTATTTAAAATATATTGGTTGGAC 155
Sbjct 406 -------------------------------------------------------------------------- 405
Query 156 TCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACC 229
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 406 -----------AGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACC 468
Query 230 TGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTAC 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 469 TGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTAC 542
Query 304 AGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCT--------------------------TAAGAAC 351
||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 543 AGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAACTTTTCTACCCTGAGTGCGAGATAAGAAC 616
Query 352 -----ATGGAAG------------------GGGTG--CTGATGGAC-------------GTGGACTGT------ 381
.|||||| .|||| |.|| |||| .|| ||||
Sbjct 617 GATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGA-GGACTTTCTTCCAGCTTCTG--CTGTCCTTCT 687
Query 382 -----GAGAGC------------GTCTACCCCATTGTG------------------------------------ 402
|||||| ||||.|.|||...||
Sbjct 688 TTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCGAAGTGCAAAAGAG 761
Query 403 -------------------------------------------------------------------------- 402
Sbjct 762 TCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTTTTTTTTTTTTTTT 835
Query 403 -------------------------------------------------------------------------- 402
Sbjct 836 GAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCC 909
Query 403 -------------------------------------------------------------------------- 402
Sbjct 910 TGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATTACAGGTCCCCGCCACCACACCTGGCTA 983
Query 403 -------------------------------------------------------------------------- 402
Sbjct 984 ATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCT 1057
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1058 GACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCATTGCACCCAACTCA 1131
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1132 CTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGACATCAAGCCCTCCCTGCCCCTTCTCCCTCCC 1205
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1206 CTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCAATTGAAAAATCAGTTAGTTCAGCTGGGTGC 1279
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1280 AGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGCCAGGAGTTGGAGA 1353
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1354 CCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGATGGGCAC 1427
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1428 CTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCC 1501
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1502 GAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAACTGTCTCAAAAAACAAAACAAAACAAAACAC 1575
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1576 AAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGAAGACTAGATTATTGCTCAGCAGTAACCACT 1649
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1650 CCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCACCCATTCCTGTTAGGCTTGGCCAGGTGAAT 1723
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1724 CGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTTGCAGTGGGCTTGTGCTTGGTGCTGGTCCTC 1797
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1798 CGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTTAGCCCTCTGGCCCTGGGGAGAATGA 1871
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1872 GAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGAGCGAGAGATAAATGCT 1945
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1946 TGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGTGGCACAATCTCAGCTCAT 2019
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2020 TGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACTACAGCCAAATT 2093
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2094 GGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCAAAGGAACTGAGTGCCCGGGGAGCTCAAAGG 2167
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2168 GAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTTTCCAGCTGCTTGTGCCCCCCACTTC 2241
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2242 ATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGGTGATGTTTGACAGTGGCTGCCTGCCCTGAAAATCGCCCT 2315
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2316 TGTCTGTCCAGCCTGGCCTGAATTTCACCCACATCAACCCACATGGGATACTTTATTTATTTATTTATCTATTT 2389
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2390 ATTTATTTATTTATTTATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAGGCTGGAGTGCCGTGGTGCTATCATA 2463
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2464 GCTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGCCTCCAGAGTAGCTGGGACTACAGG 2537
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2538 AACACACCACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGATGGGGGTCTCTCTATGTTGCCCAGGC 2611
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2612 TGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAAGTACTGGGATTACAGAATCGGCTC 2685
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2686 CCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATG 2759
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2760 ACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCT 2833
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2834 CCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTA 2907
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2908 CAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCC 2981
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2982 CCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCA 3055
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3056 TGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTG 3129
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3130 GTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGA 3203
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3204 GGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCAC 3277
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3278 GAGGCTCGCTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCACTGCAGCCGCCACCTCCTGGGCTCA 3351
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3352 AGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGTGCACCACCAGGCCCAGCTAATTTATTT 3425
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3426 TTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGGCTGGTCTTGAACTCCTGGCTTCAAG 3499
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3500 CGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCAATACTGCCCC 3573
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3574 ATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAGTATATTATGACCATAAT 3647
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3648 ATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAGAGTGG 3721
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3722 GTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTACTAAAAATACA 3795
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3796 AAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGA 3869
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3870 ATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCT 3943
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3944 GTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTTGAAAGACTTC 4017
Query 403 -------------------------- 402
Sbjct 4018 ACATTAAAAAAAAACTCACAATTTAA 4043
