Nucleotide Global Alignment

Description

Query:
TRCN0000474481
Subject:
XR_002956409.1
Aligned Length:
2509
Identities:
1876
Gaps:
601

Alignment

Query    1  ----------------ATGGCGACCTCCGAGAGGGCTCTCCTGAGGACCAGAGCTGCCTCTCTCCTGAGAGGCT  58
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  AACCCCGCTAAACAAGATGGCGACCTCCGAGAGGGCTCTCCTGAGGACCAGAGCTGCCTCTCTCCTGAGAGGCT  74

Query   59  TGGGCAGATCCCGAACTGGAGCCCGATCGTTACAGTTTCGCGCAGAAAAAGAGCGTCAGCCTTGCTGGTCTTTT  132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGGGCAGATCCCGAACTGGAGCCCGATCGTTACAGTTTCGCGCAGAAAAAGAGCGTCAGCCTTGCTGGTCTTTT  148

Query  133  CCCATGGGGCAGAAGACGAAAGGCAGCTCTAACATAGCCTCCTCCTACCTGCTCCAGCAGCTCATGCACCGCTA  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCCATGGGGCAGAAGACGAAAGGCAGCTCTAACATAGCCTCCTCCTACCTGCTCCAGCAGCTCATGCACCGCTA  222

Query  207  TCAGGAGCTGGACTCGGACGGAGATGAGGACCAGGGCGAGGGCGAGGCGGGATCCGAGGAGTCCTCAGAGTCCG  280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCAGGAGCTGGACTCGGACGGAGATGAGGACCAGGGCGAGGGCGAGGCGGGATCCGAGGAGTCCTCAGAGTCCG  296

Query  281  AAATGCTGAATTTGGAGGAGGAATTTGATGGGGTCCTGAGAGAGGAGGCTGTGGCCAAAGCACTCCATCACTTG  354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAATGCTGAATTTGGAGGAGGAATTTGATGGGGTCCTGAGAGAGGAGGCTGTGGCCAAAGCACTCCATCACTTG  370

Query  355  GGGCGCTCAGGCTCTGGGACTGAGCAAGTCTACCTCAATCTAACTTTATCAGGTTGTAATTTAATTGATGTTAG  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGGCGCTCAGGCTCTGGGACTGAGCAAGTCTACCTCAATCTAACTTTATCAGGTTGTAATTTAATTGATGTTAG  444

Query  429  CATTCTCTGTGGATATGTTCATCTACAGAAGTTGGATCTTTCAGCGAATAAAATTGAAGATTTATCTTGTGTGA  502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CATTCTCTGTGGATATGTTCATCTACAGAAGTTGGATCTTTCAGCGAATAAAATTGAAGATTTATCTTGTGTGA  518

Query  503  GTTGTATGCCTTATCTCCTAGAACTTAATGCTTCTCAAAATAATTTGACTACGTTCTTCAATTTCAAGCCACCC  576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTTGTATGCCTTATCTCCTAGAACTTAATGCTTCTCAAAATAATTTGACTACGTTCTTCAATTTCAAGCCACCC  592

Query  577  AAAAACCTCAAGAAAGCGGATTTTTCCCACAACCAAATTTCTGAAATTTGTGATTTGTCAGCGTATCATGCTCT  650
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAAAACCTCAAGAAGGCGGATTTTTCCCACAACCAAATTTCTGAAATTTGTGATTTGTCAGCGTATCATGCTCT  666

Query  651  CACTAAACTAATTTTGGATGGCAATGAGATAGAAG-AATCAGTGGACTAGAGATGTGCA--CACCTAATTCACC  721
            ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  .||||||||||||
Sbjct  667  CACTAAACTAATTTTGGATGGCAATGAGATAGAAGAAATCAGTGGACTAGAGATGTGCAACAACCTAATTCACC  740

Query  722  TTAGTTTGGCC-ACAAT-AGATCACGAC-ATTAATGGCTTAAACAAGTTACCAATCAAAATACTTTGTTCTGAG  792
            ||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  741  TTAGTTTGGCCAACAATAAGATCACGACAATTAATGGCTTAAACAAGTTACCAATCAAAATACTTTG-TCTGAG  813

Query  793  CAATAACCAGATTGAGATGATCACAGGTTTGGAGGATCTGAAAGCCCTGCAGAACCTGGATCTGTCCCACAATC  866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  814  CAATAACCAGATTGAGATGATCACAGGTTTGGAGGATCTGAAAGCCCTGCAGAACCTGGATCTGTCCCACAATC  887

Query  867  AGATAAGCAGCCTCCAAGGCTTAGAGAATCATGACCTCCTGGAAGTGATCAACCTGGAGGATAATAAGATTGCT  940
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  AGATAAGCAGCCTCCAAGGCTTAGAGAATCATGACCTCCTGGAAGTGATCAACCTGGAGGATAATAAGATTGCT  961

Query  941  GAGCTGAGAGAAATAGAATACATTAAAAATTTACCCATCCTTCGAGTTCTCAATCTTCTAGAAAATCCAATTCA  1014
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  GAGCTGAGAGAAATAGAATACATTAAAAATTTACCCATCCTTCGAGTTCTCAATCTTCTAGAAAATCCAATTCA  1035

Query 1015  GGAAAAGTCTGAATATTGGTTCTTCGTAATTTTTATGCTTCTGCGATTAACAGAATTAGATCAGAAGAAGATTA  1088
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  GGAAAAGTCTGAATATTGGTTCTTCGTAATTTTTATGCTTCTGCGATTAACAGAATTAGATCAGAAGAAGATTA  1109

Query 1089  AAGTGGAAGAAAAGGTTTCAGCAGTGAATAAATATGATCCTCCCCCTGAAGTGGTTGCAGCTCAAGACCACCTG  1162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  AAGTGGAAGAAAAGGTTTCAGCAGTGAATAAATATGATCCTCCCCCTGAAGTGGTTGCAGCTCAAGACCACCTG  1183

Query 1163  ACCCATGTTGTCAACAGCGTGATGCAGCCGCAGAGGATCTTTGACAGCACTCTTCCCAGCCTGGATGCTCCTTA  1236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1184  ACCCATGTTGTCAACAGCGTGATGCAGCCGCAGAGGATCTTTGACAGCACTCTTCCCAGCCTGGATGCCCCTTA  1257

Query 1237  TCCCATGCTGATACTAGCTGGTCCTGAAGCTTGTGGGAAACGAGAGCTTGCCCATCGCCTCTGCAGACAGTTTA  1310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258  TCCCATGCTGATACTAGCTGGTCCTGAAGCTTGTGGGAAACGAGAGCTTGCCCATCGCCTCTGCAGACAGTTTA  1331

Query 1311  GCACTTACTTCAGATATGGGGCCTGTCATACCACAAGACCACCTTACTTTGGAGAAGGGGATCGAGTTGATTAT  1384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332  GCACTTACTTCAGATATGGGGCCTGTCATACCACAAGACCACCTTACTTTGGAGAAGGGGATCGAGTTGATTAT  1405

Query 1385  CATTTTATCTCTCAAGACGTTTTTGATGAAATGGTGAACATGGGGAAATTCATTCTAACATTTAGTTATGGTAA  1458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406  CATTTTATCTCTCAAGACGTTTTTGATGAAATGGTGAACATGGGGAAATTCATTCTAACATTTAGTTATGGTAA  1479

Query 1459  TCACAAGTATGGATTAAATAGGGACACCGTAGAAGGTATCGCAAGAGATGGTTTGGCAAGCTGTATTCATATGG  1532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480  TCACAAGTATGGATTAAATAGGGACACCGTAGAAGGTATCGCAAGAGATGGTTTGGCAAGCTGTATTCATATGG  1553

Query 1533  AAATAGAAGGTGTAAGAAGTTTGAAATATTCCTATTTTGAGCCTCGTTATATCCTGGTGGTGCCCATGAACAAG  1606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554  AAATAGAAGGTGTAAGAAGTTTGAAATATTCCTATTTTGAGCCTCGTTATATCCTGGTGGTGCCCATGAACAAG  1627

Query 1607  GAAAAATATGAGGGATATTTGCGGAGAAAAGGATTATTCAGTCGTGCAGAAATTGAATTTGCTGTCTCCAGAGT  1680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628  GAAAAATATGAGGGATATTTGCGGAGAAAAGGATTATTCAGTCGTGCAGAAATTGAATTTGCTGTCTCCAGAGT  1701

Query 1681  GGACCTTTATAATAAAAATTAATCAGAATTTTCCGGGGATATTTGAATGAGGTAATCAATGCAGATGATCTGGA  1754
            |||||||||| ||.|||||||||||||||||||| |||||||||..|||             ||||||||||||
Sbjct 1702  GGACCTTTAT-ATTAAAATTAATCAGAATTTTCC-GGGATATTTTGATG-------------AGATGATCTGGA  1760

Query 1755  TG-TGCCTTACAAAAAACTGAGTCAGCTCATTAGAGAATACCTTGGATGGAATGAGGAACCTGCCAAGAGTTTG  1827
            || |||| |||.||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||
Sbjct 1761  TGTTGCC-TACCAAAAACTGAGTCAGCTCATTAGAGAATACCTTGGATTGACTGAGGAACCTGCCAAGAGTTTG  1833

Query 1828  GCTACAACTGCAGATGTAAAGACATCCCACCTGAAACCTGAAGCGCATCCTACAAAGTATATTTCTTCGAATAT  1901
            |||||||||||||    .|.||..||||.|..|.||   ||||        ||      |.|.|||       .
Sbjct 1834  GCTACAACTGCAG----CAGGAGCTCCCGCTAGCAA---GAAG--------AC------TGTCTCT-------G  1879

Query 1902  GGGTGATTTCCTGCATTCTACAGACAGAAACTACCTCATTAAATTT---------TGGGCCAAACTTTCAGCCA  1966
            |||||    ||.|||                .||||..||..||.|         |.|||.|||||    ||  
Sbjct 1880  GGGTG----CCAGCA----------------CACCTGGTTCCATCTCCCAGGTGCTTGGCGAAACT----GC--  1927

Query 1967  AAAAAACA-----CCAGCGGAAAGAGATTCTATACACAGACAGCACGAGGCAGCCCGGCAAGCTCTAATGGGAA  2035
               ||.||     ||||..||                                                     
Sbjct 1928  ---AAGCAGATGGCCAGATGA-----------------------------------------------------  1945

Query 2036  GGATACGCCCTGATCACACACTCCTATTTCAAAGGGGTCCAGTACCAGCACCTCTCACCAGTGGTCTACACTAT  2109
                                                                                      
Sbjct 1946  --------------------------------------------------------------------------  1945

Query 2110  TATACAACTTTAGAAGAACTCTGGAAAAGTTTTGATCTTTGTGAAGACTATTTTAAACCTCCATTTGGACCATA  2183
                                                                                      
Sbjct 1946  --------------------------------------------------------------------------  1945

Query 2184  TCCTGAAAAGAGTGGGAAGGATTCCTTGGTTTCCATGAAATGTTCATTGTTTCGGTTCTGTCCGTGGTCAAAAG  2257
                                                                                      
Sbjct 1946  --------------------------------------------------------------------------  1945

Query 2258  AATTGCCTTTCCAGCCTCCGGAGGGGAGCATTTCTTCACACCTAGGATCAGGAGCCAGTGACAGTGAGACCGAA  2331
                                                                                      
Sbjct 1946  --------------------------------------------------------------------------  1945

Query 2332  GAGACCCGGAAAGCACTACCTATACAATCATTTTCACATGAAAAAGAGTCTCACCAACACAGACAACACTCGGT  2405
                                                                                      
Sbjct 1946  --------------------------------------------------------------------------  1945

Query 2406  CCCAGTCATCAGTCGCCCAGGTTCCAACGTCAAACCCACCCTCCCTCCAATCCCTCAGGGCCGCAGG  2472
                                                                               
Sbjct 1946  -------------------------------------------------------------------  1945

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