Nucleotide Global Alignment
Description
- Query:
- TRCN0000474759
- Subject:
- NM_001166604.1
- Aligned Length:
- 1389
- Identities:
- 733
- Gaps:
- 573
Alignment
Query 1 ATGGCCCTGACCCTGTTTGATACAGATGAATATAGACCTCCTGTTTGGAAATCTTACTTATATCAGCTACAACA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGAAGCCCCTCATCCTCGAAGAATTACCTGTACTTGCGAGGTGGAAAACAGACCAAAGTATTATGGAAGAGAGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTCATGGCATGATCTCCAGAGAAGCAGCCGACCAGCTCTTGATTGTGGCTGAGGGGAGCTACCTCATCCGGGAG 222
|||.|| ||||.||| .||||| ||.|..||||..|||||.| ||
Sbjct 1 ---ATGCCA-----TCCAAAGA-------------GTCTTG---GTCGGGGAGGAAAGCTAAC---------AG 41
Query 223 AGCCAGCGGCAG-CCAGGGACCTACACTTTGGCTTTAAGATTTGGAAGTCAAACCAGA--------AACTTCAG 287
||||| ||| || ||| |||..|||||.|| |.| .||
Sbjct 42 AGCCA----CAGTCC--------ACA-------------------AAGCAAAACCCGAGGGCCGGCAGC--AAG 82
Query 288 GCTCTACTACGATGGCAAGCACTTTGTTGGGGA--GAAACGCTTTGAGTCCATCCACGATCTGGTGACTGATGG 359
||| |||| |||.|| ||| ||| |||| |||| ||||
Sbjct 83 GCT-TACT--GATAGC-AGC-CTT-----GGGAATGAAA---------------------CTGG---------- 115
Query 360 CTTGATTACTCTCTATATTGAAACCAAGGCAGCAGAATACATTGCCAAGATGACGATAAACCCAATTTATGAGC 433
.|||||.| |||.||.|.| ||| ||||.|
Sbjct 116 -------GCTCTCAA----------AAGTCATCTG---------------TGA---------CAATCT------ 142
Query 434 ACGTAGGATACACAACCTTAAACAGAGAGCCAGCATACAAAAAACATATGCCAGTCCTGAAAGAGACAC-ATGA 506
|| |||||| ||||| ||.| .||.
Sbjct 143 -----GG-----CAACCT--------------------------------------CTGAA----ACTCTTTGC 164
Query 507 TGAGAGAGATTCTACAGGCCAGGATGGGGTGTCAGAGAAAAGGTTGACATCACTTGTTAGAAGAGCAACTCTGA 580
| .|||| || .||||||||||||||||||||||||||||||||
Sbjct 165 T------TATTC-----GC----------------------AGTTGACATCACTTGTTAGAAGAGCAACTCTGA 205
Query 581 AAGAAAACGAGCAAATTCCAAAATATGAAAAGATTCACAATTTCAAGGTGCATACATTCAGAGGGCCACACTGG 654
|||||||.||.|||||||||||||||||||||.||||||||||||||||||||||.|||.||||||||||||||
Sbjct 206 AAGAAAATGAACAAATTCCAAAATATGAAAAGGTTCACAATTTCAAGGTGCATACGTTCCGAGGGCCACACTGG 279
Query 655 TGTGAATACTGTGCCAACTTTATGTGGGGTCTCATTGCTCAGGGAGTGAAATGTGCAGATTGTGGTTTGAATGT 728
||||||||||||||||||||.||||||||.||||||||||||||||||||||||||
Sbjct 280 TGTGAATACTGTGCCAACTTCATGTGGGGCCTCATTGCTCAGGGAGTGAAATGTGC------------------ 335
Query 729 TCATAAGCAGTGTTCCAAGATGGTCCCAAATGACTGTAAGCCAGACTTGAAGCATGTCAAAAAGGTGTACAGCT 802
Sbjct 336 -------------------------------------------------------------------------- 335
Query 803 GTGACCTTACGACGCTCGTGAAAGCACATACCACTAAGCGGCCAATGGTGGTAGACATGTGCATCAGGGAGATT 876
Sbjct 336 -------------------------------------------------------------------------- 335
Query 877 GAGTCTAGAGGTCTTAATTCTGAAGGACTATACCGAGTATCAGGATTTAGTGACCTAATTGAAGATGTCAAGAT 950
|||||||||||||||||||||.||||||||.|||||||||||||||||.|||||||||||||||||
Sbjct 336 --------AGGTCTTAATTCTGAAGGACTCTACCGAGTGTCAGGATTTAGTGACCTGATTGAAGATGTCAAGAT 401
Query 951 GGCTTTCGACAGAGATGGTGAGAAGGCAGATATTTCTGTGAACATGTATGAAGATATCAACATTATCACTGGTG 1024
||||||.||.|||||||||||||||||.|||||||||||||||||||||||.||.|||||||||||||||||||
Sbjct 402 GGCTTTTGATAGAGATGGTGAGAAGGCGGATATTTCTGTGAACATGTATGAGGACATCAACATTATCACTGGTG 475
Query 1025 CACTTAAACTGTACTTCAGGGATTTGCCAATTCCACTCATTACATATGATGCCTACCCTAAGTTTATAGAATCT 1098
|||||||||||||||||||||||.||||||||||.|||||.|||||.|||||||||||.|||||.||.||.|||
Sbjct 476 CACTTAAACTGTACTTCAGGGATCTGCCAATTCCTCTCATCACATACGATGCCTACCCCAAGTTCATTGAGTCT 549
Query 1099 GCCAAAATTATGGATCCGGATGAGCAATTGGAAACCCTTCATGAAGCACTGAAACTACTGCCACCTGCTCACTG 1172
||||||||||||||.||.||.|||||||||||.||||||||.||||||||||.|...|||||.|||||.|||||
Sbjct 550 GCCAAAATTATGGACCCTGACGAGCAATTGGAGACCCTTCACGAAGCACTGAGATCGCTGCCGCCTGCCCACTG 623
Query 1173 CGAAACCCTCCGGTACCTCATGGCACATCTAAAGAGAGTGACCCTCCACGAAAAGGAGAATCTTATGAATGCAG 1246
|||.||.|||||||||||||||||.|||||.||||||||||||||.||.||.|||||||||||.||||.|||||
Sbjct 624 CGAGACGCTCCGGTACCTCATGGCGCATCTCAAGAGAGTGACCCTTCATGAGAAGGAGAATCTGATGAGTGCAG 697
Query 1247 AGAACCTTGGAATCGTCTTTGGACCCACCCTTATGAGATCTCCAGAACTAGACGCCATGGCTGCATTGAATGAT 1320
||||||||||.|||||.||||||||.|||||.||||||||.|||||.||.|||.|||||||.||..||||.||.
Sbjct 698 AGAACCTTGGGATCGTGTTTGGACCAACCCTCATGAGATCCCCAGAGCTCGACCCCATGGCCGCCCTGAACGAC 771
Query 1321 ATACGGTATCAGAGACTGGTGGTGGAGCTGCTTATCAAAAACGAAGACATTTTATTT 1377
|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 ATACGCTATCAGAGACTGGTGGTGGAGCTGCTTATCAAAAACGAAGACATTTTATTT 828
