Nucleotide Global Alignment
Description
- Query:
- TRCN0000475094
- Subject:
- XM_006530394.3
- Aligned Length:
- 2504
- Identities:
- 1745
- Gaps:
- 559
Alignment
Query 1 ATGACGGATGAACAGGTGTGCGAGACTGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTGCCCGCCTCAACGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCCCTCTCCTGCCTCAGGAATGTCCACATGTCAGGAGGCAACCTTTCCAAACAAGACTGGACCATCCAGTGGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCACCACAGAGACGGGGAAGGAGAACAATCCCGTGTGCCCCCCGGAGCCCACCCCGTGGATCCGCACCCATCTC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCCCAGAGCCCCAGGGTCCCGTCCAAGTGCGTCCAGCACTATTGTCACACCAGCCCCACTCCCGGGGCCCCTGT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GTACACCCACGTGGACAGGCTTACCGTGGACGCCTACCCGGGCTTGTGCCCGCCCCCGCCACTGGAGTCGGGCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACCGTTCCCTGCCCCCATCGCCCCGGCAGCGGCACGCGGTCCGCACCCCGCCGCGCACCCCCAACATCGTCACC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ACCGTGACCCCGCCGGGCACGCCGCCCATGAGGAAGAAGAACAAGCTGAAGCCCCCGGGGA-------CCCCAC 511
||| |.|||.| |||.|.||| ||.||
Sbjct 1 ---------------------------ATG-------------ATCTGCA--CCCTGTGGAGGTTGGTCCTCA- 31
Query 512 CGCCCTCCTCCCGAAAACTGATACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGT-T 584
|||||..|||| ||.| ||.|.||.|| |||| |
Sbjct 32 -GCCCTAGTCCC--AAGC-----------------------------CTCCTTCAGA-----------GAGTCT 62
Query 585 CCAGCTGGGGCACCGC-GTGGACGAG-GCCCACACGCCCAA-------AGCCAAGAAGAAGAGCAAACCCTTGA 649
.||.|.||..||||.| |.|| |||| | || ||||||||||||||||||||||||||
Sbjct 63 ACACCAGGCCCACCACAGAGG-CGAGAG-----------AATTTTTGGAGCCAAGAAGAAGAGCAAACCCTTGA 124
Query 650 ACCTCAAGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCCCCTCTCAGCAGCGCTCCCCGCTGCTGTCCGAG 723
|||||||||||||||||.||||.|||||||||||||||||||||.|.|||||.|||||.|||||.|||||||||
Sbjct 125 ACCTCAAGATCCACAGCGGCGTGGGCAGCTGCGAGAACATCCCCGCCCAGCAACGCTCTCCGCTCCTGTCCGAG 198
Query 724 CGCTCCCTCCGCTCCTTCTTTGTGGGACACGCACCTTTCCTGCCTTCCACCCCTCCTGTTCACACTGAGGCCAA 797
||||||.|.||.||||||||||||||.||||..||.||||||||.||||||||.|||||.||||||||.|||||
Sbjct 199 CGCTCCTTGCGGTCCTTCTTTGTGGGCCACGGGCCCTTCCTGCCCTCCACCCCACCTGTCCACACTGAAGCCAA 272
Query 798 CTTCTCTGCAAACACACTGTCAGTGCCACGCTGGTCCCCGCAGATCCCTCGCAGAGATCTTGGCAACTCCATCA 871
.|||||||||||||||||.||.||.||.||||||||.||.||||||||.||||||||.||||||||.|||||||
Sbjct 273 TTTCTCTGCAAACACACTCTCTGTACCTCGCTGGTCACCACAGATCCCACGCAGAGACCTTGGCAATTCCATCA 346
Query 872 AGCACAGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACAGTCTGTGGGAAAGGGATGCTTTTTGGCCTC 945
|||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||
Sbjct 347 AGCACAGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACGGTCTGCGGGAAAGGGATGCTTTTTGGCCTC 420
Query 946 AAGTGTAAAAACTGCAAGTTAAAGTGCCACAACAAATGCACCAAAGAAGCCCCACCCTGTCATCTTCTGATCAT 1019
||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||.|||||.||
Sbjct 421 AAGTGTAAAAACTGCAAGTTAAAGTGCCACAATAAATGCACCAAAGAAGCCCCGCCCTGTCACCTCCTGATTAT 494
Query 1020 CCACCGAGGAGATCCAGCAAGGTTAGTCCGGACAGAGTCCGTTCCGTGTGACATCAACAACCCTCTACGGAAGC 1093
||||||||||||.||||||||||||||.||.||.|||||.||.||.|||||||||||||||||..|.|||||||
Sbjct 495 CCACCGAGGAGACCCAGCAAGGTTAGTGCGAACGGAGTCGGTGCCCTGTGACATCAACAACCCGGTCCGGAAGC 568
Query 1094 CACCTCGCTATTCAGACCTGCACATCAGTCAGACGCTCCCCAAAACCAACAAAATCAACAAGGACCACATCCCT 1167
|..|.||.||||||||.||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 569 CTGCCCGATATTCAGATCTCCACATCAGTCAGACTCTCCCCAAAACCAACAAAATCAACAAGGACCACATCCCT 642
Query 1168 GTCCCTTACCAGCCAGACTCCAGCAGCAACCCCTCCTCCACGACGTCCTCCACGCCCTCCTCGCCAGCACCCCC 1241
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.||||||||
Sbjct 643 GTCCCTTACCAGCCAGACTCCAGCAGCAATCCCTCCTCCACGACGTCCTCCACGCCCTCCTCACCGGCACCCCC 716
Query 1242 CCTCCCTCCTAGTGCCACGCCGCCTTCTCCCCTACACCCTTCCCCACAGTGCACACGGCAGCAGAAGAACTTCA 1315
|||||||||.||.||||||||||||||||||||.|||||.|||||.||||||.|..|.|||.|.||||||||||
Sbjct 717 CCTCCCTCCCAGCGCCACGCCGCCTTCTCCCCTGCACCCCTCCCCGCAGTGCCCGAGACAGAAAAAGAACTTCA 790
Query 1316 ACCTGCCAGCATCCCACTACTACAAATACAAGCAGCAGTTCATCTTCCCAGATGTGGTGCCGGTGCCGGAGACG 1389
||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.||.||.|||||.
Sbjct 791 ACCTGCCAGCTTCCCACTACTACAAATACAAGCAACAGTTCATCTTCCCAGATGTGGTGCCTGTACCAGAGACA 864
Query 1390 CCGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAATCCAATCTTGGAAGGAAATCCATTACTTCA 1463
||.||||||||.|||||.||||||||||||||.||.|||||.|||.||||||||||||||||.|||||||||||
Sbjct 865 CCCACCCGGGCACCCCAAGTCATCCTGCATCCTGTCACCTCAAATACAATCTTGGAAGGAAACCCATTACTTCA 938
Query 1464 AATTGAAGTGGAGCCAACGTCGGAGAATGAAGAGGTCCATGATGAGGCCGAAGAGTCAGAGGATGACTTCGAGG 1537
||||||||||||.|||||.||.|||||.||||||..|||..||||.||.||.|||||.|||||.||.||.||.|
Sbjct 939 AATTGAAGTGGAACCAACCTCCGAGAACGAAGAGAGCCACAATGAAGCAGAGGAGTCCGAGGACGAGTTTGAAG 1012
Query 1538 AGATGAACCTGTCCCTCCTCTCGGCCCGGAGCTTCCCACGCAAGGCCAGCCAGACCAGCATCTTCCTTCAGGAG 1611
||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1013 AGATGAACCTATCCCTCCTCTCAGCCCGGAGCTTCCCACGCAAAGCCAGCCAGACCAGCATCTTCCTTCAGGAG 1086
Query 1612 TGGGACATCCCCTTTGAGCAGCTGGAGATCGGCGAGCTCATTGGAAAGGGCCGCTTTGGGCAAGTGTACCACGG 1685
|||||||||||.|||||.|||||.|||||.|||||||||||.||.|||||.|||||.|||||.||.||||||||
Sbjct 1087 TGGGACATCCCGTTTGAACAGCTAGAGATTGGCGAGCTCATCGGGAAGGGTCGCTTCGGGCAGGTTTACCACGG 1160
Query 1686 CCGCTGGCATGGCGAGGTGGCCATCCGGCTGATTGACATTGAGAGGGACAACGAGGACCAGCTCAAGGCCTTCA 1759
.||||||||.||||||||||||||||||.||||||||||.|||||||||||.|||||||||||.||||||||||
Sbjct 1161 ACGCTGGCACGGCGAGGTGGCCATCCGGTTGATTGACATAGAGAGGGACAATGAGGACCAGCTTAAGGCCTTCA 1234
Query 1760 AGCGGGAGGTGATGGCCTACAGGCAGACACGGCATGAGAACGTGGTGCTTTTCATGGGTGCCTGCATGAGCCCG 1833
|||||||.||||||||||||||||||||..||||.||||||||||||||.||||||||.||||||||||||||.
Sbjct 1235 AGCGGGAAGTGATGGCCTACAGGCAGACGAGGCACGAGAACGTGGTGCTCTTCATGGGAGCCTGCATGAGCCCA 1308
Query 1834 CCTCACCTGGCCATCATCACCAGCCTCTGTAAGGGACGGACGCTCTATTCCGTTGTGAGGGATGCCAAAATCGT 1907
||.|||.||||||||||||||||||||||||||||||||||.|||||.||.||.||||||||.|||||.||.||
Sbjct 1309 CCCCACTTGGCCATCATCACCAGCCTCTGTAAGGGACGGACACTCTACTCTGTGGTGAGGGACGCCAAGATTGT 1382
Query 1908 TTTGGATGTCAACAAAACCAGGCAGATTGCTCAAGAAATTGTGAAGGGCATGGGCTACCTCCACGCCAAGGGAA 1981
.||||||||||||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||.|
Sbjct 1383 CTTGGATGTCAACAAAACCAGGCAGATCGCGCAAGAGATTGTAAAGGGCATGGGCTACCTCCACGCCAAGGGGA 1456
Query 1982 TCCTACACAAGGACCTCAAGTCAAAGAACGTCTTCTATGACAACGGCAAAGTGGTCATCACGGACTTTGGACTC 2055
||||.||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||.||||||||.|||
Sbjct 1457 TCCTTCATAAGGACCTCAAATCGAAGAACGTCTTCTATGACAACGGCAAAGTGGTCATCACAGACTTTGGGCTC 1530
Query 2056 TTCAGCATTTCTGGGGTGCTGCAGGCTGGCAGGCGGGAGGACAAACTGCGCATCCAGAATGGCTGGCTATGCCA 2129
|||||||||||.||||||||||||||||||.|||||||.|||||||||||.||||||||.||||||||.||.||
Sbjct 1531 TTCAGCATTTCCGGGGTGCTGCAGGCTGGCCGGCGGGACGACAAACTGCGGATCCAGAACGGCTGGCTGTGTCA 1604
Query 2130 CCTGGCACCAGAGATCATCCGCCAGCTGTCCCCCGACACAGAGGAGGATAAGCTCCCCTTCTCCAAGCACTCTG 2203
||||||.|||||.||||||||||||||||||||.||||||||.|||||.||||||||.||||||||||||||.|
Sbjct 1605 CCTGGCCCCAGAAATCATCCGCCAGCTGTCCCCTGACACAGAAGAGGACAAGCTCCCATTCTCCAAGCACTCGG 1678
Query 2204 ACGTCTTTGCCCTTGGCACAATCTGGTATGAACTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGAG 2277
|.||||||||.||||||||.|||||||||||.||||||||||||||.|||||.|||||||||||||||||||||
Sbjct 1679 ATGTCTTTGCGCTTGGCACCATCTGGTATGAGCTCCACGCCAGGGAGTGGCCATTCAAGACCCAACCAGCAGAG 1752
Query 2278 GCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGGA 2351
|||||.||.|||||.||||||||.||.|||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1753 GCAATCATTTGGCAGATGGGCACGGGAATGAAGCCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGGA 1826
Query 2352 CATTCTTCTCTTCTGCTGGGCCTTTGAACAAGAAGAGAGACCTACCTTCACCAAGCTCATGGACATGCTGGAGA 2425
|||.||.|||||||||||||||||.||.||.||||||.|.||.|||||.||||||||||||||||||||.||||
Sbjct 1827 CATACTGCTCTTCTGCTGGGCCTTCGAGCAGGAAGAGCGGCCCACCTTTACCAAGCTCATGGACATGCTAGAGA 1900
Query 2426 AACTGCCAAAGCGAAACCGTCGCCTGTCTCACCCTGGACATTTCTGGAAGTCTGCAGAGCTG 2487
|||||||||||||||||||.||||||||.|||||.|||||||||||||||||||||||||||
Sbjct 1901 AACTGCCAAAGCGAAACCGCCGCCTGTCGCACCCCGGACATTTCTGGAAGTCTGCAGAGCTG 1962
