Nucleotide Global Alignment
Description
- Query:
- TRCN0000475160
- Subject:
- XM_006537910.2
- Aligned Length:
- 1579
- Identities:
- 847
- Gaps:
- 608
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGGCTGTACTGGTTCCTGGCCGTCCCTCAGAGCAAACCCTTTCCTCCCATAATCGTTCAGCCTTGTACAAA 74
Query 1 ----------------------------------------------ATGAACATGCCCCAGTCCCTGGGCAACC 28
|||||||||||||||||.||.||||.||
Sbjct 75 GTGTCCACAACCCAGCCTGTCCCGTGCCTTGGTCCCTGGGGCTGCCATGAACATGCCCCAGTCACTAGGCACCC 148
Query 29 AGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGGGCCTGGGACCA-CGTCCCCACCCGAGCA 101
||||||||||.||.||.||.||||||||.||.||.|||...||.|||.||||..||| .|..|||| |.|||||
Sbjct 149 AGCCACTGCCTCCGGAGCCACCATCCCTGGGGACTCCTATAGAAGGGTCTGGAGCCATAGCACCCA-CTGAGCA 221
Query 102 CTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCTCTGTCCACTTCTACATCTTCTTTGGCC 175
|||||||||||||||.||||||||||||||.||||||||.||||||||||||||||||||||||||.|||||.|
Sbjct 222 CTGCTGGCCAGTGCGTCCGACTCTGCGCAATGAGCTGGATACCTTCTCTGTCCACTTCTACATCTTTTTTGGTC 295
Query 176 CAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGAGGC 249
|.||.|||||||||||.||||||||||||||.||.||.|||.|||||||||||||.|||||||||||.||.|||
Sbjct 296 CCAGCGTGGCCCTTCCACCTGAGCGCCCAGCTGTATTTGCCCTGAGGCTGTTGCCGGTGCTGGACAGCGGGGGC 369
Query 250 GTCCTCAGCCTGGAGCTCCAGCTCAATGCGAGCTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGAC 323
|||||.|||||||||||||||||||||||||||||..|||||||||||||.||.||.||.||.||||||.||||
Sbjct 370 GTCCTTAGCCTGGAGCTCCAGCTCAATGCGAGCTCTCTGCGCCAGGAAAATGTAACAGTATTCGGATGCCTGAC 443
Query 324 TCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCT 397
|||.||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.||||||||.||||
Sbjct 444 TCATGAGGTGCCCTTGAGCCTGGGGGATGCTGCTGTGACCTGTTCCAAAGAGTCCCTGGCAGGCTTCCTTCTCT 517
Query 398 CTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTC 471
|.||||||||||||.||||.||.||||||||.||||||||||||||.|||||||||||||||||||||.|||||
Sbjct 518 CGGTCAGTGCCACCTCCAGAGTGGCCAGGCTTCGAATCCCATTCCCACAGACGGGGACCTGGTTCCTGACCCTC 591
Query 472 CGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTGTGGATGCGCACCTT 545
||.||.||||||||||||||.||||||||.||||||||||||||.||.|||||.||.|||.||.||||.|||||
Sbjct 592 CGTTCTCTGTGCGGGGTGGGACCTCGGTTTGTGCGGTGCCGCAATGCAACGGCAGAAGTGCGGCTGCGTACCTT 665
Query 546 CCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACG 619
|.||||||||||.|||||.|||||.||||||||.|||||||||||.|||||||||||.|||||.||.|||||||
Sbjct 666 CTTGTCCCCATGTGTGGATGACTGTGGGCCCTATGGCCAGTGCAAACTGCTGCGCACCCACAACTACCTGTACG 739
Query 620 CAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTC 693
|.|||||||||||||||||.||||||.|.||||||||.|||||.||||||||.||.||||||||||||||||||
Sbjct 740 CGGCCTGCGAGTGCAAGGCTGGGTGGCGGGGCTGGGGTTGCACAGACAGTGCCGACGCGCTCACCTATGGATTC 813
Query 694 CAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAG 767
||||||||||||||||||||.||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 814 CAGCTGCTGTCCACACTCCTCCTCTGCCTGAGCAACCTCATGTTTTTGCCACCTGTGGTCCTGGCCATTCGGAG 887
Query 768 TCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGGTATGCGGTGGTGTCTGCATCT 841
.|||||.||||||||||||||.|||||||||||||||||||||||||||||| |..
Sbjct 888 CCGATACGTGCTGGAAGCTGCCGTCTACACCTTCACCATGTTCTTCTCCACG-------------------TTC 942
Query 842 TATCACTGGGTGCTTGT----------GCATGGTGG-----TGGGTCACAGTC-----TGTATTTCCACCACGT 895
||||| |||.||| ||||.|||| ||..|||..|.| ||||.||| .||
Sbjct 943 TATCA-----TGCCTGTGACCAGCCAGGCATTGTGGTTTTCTGTATCATGGACTATGATGTACTTC-----AGT 1006
Query 896 TCTCCGAGGGTT---TGGG------AATGTCTGTG-------CCTTCA-----CTGTGTCTTCTACAGACAGAG 948
|||..|| || |||| ||||||.||| ||.||| .||..||.|||.|||.|.|.|
Sbjct 1007 TCTGTGA---TTTCCTGGGCTCCTTAATGTCCGTGTGGGTCACCGTCATAGCCATGGCTCGTCTGCAGCCTGTG 1077
Query 949 A--CAGCAG----------------------TGCTTCCCAAACTGTC-AT------------------GCATAG 979
| .||||| |||| .||||| || ||||.|
Sbjct 1078 ATCAAGCAGGTGCTGTATCTGCTCGGGGCTATGCT------GCTGTCTATGGCTCTGCAGCTTGACCGGCATGG 1145
Query 980 ATAATG-----------------GTCATTTTTG-----------TAAGACACA--TTGGAGTAAA--------- 1014
|...|| ||| |.|||| |..|.|||| |||| |.|
Sbjct 1146 ACTCTGGAATCTGCTGGGACCCAGTC-TCTTTGCCCTCGGGATCTTGGCCACAGCTTGG---ACAGTTCGCAGC 1215
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1216 GTCCGGCGCCGGCACTGTTACCCACCGACATGGCGCCGCTGGCTTTTCTACCTGTGTCCCGGCAGCCTGATTGC 1289
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1290 TGGCAGTGCCGTTCTACTGTATGCTTTCGTGGAGACTCGGGACAACTACTTCTACATTCACAGCATTTGGCACA 1363
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1364 TGCTCATTGCTGGCAGTGTGGGCTTCCTGCTGCCTCCCCGTGCCAAGACTGACCGCCGGGTCCCTTCTGGAGCC 1437
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1438 CGGGCCAGGGGCTGCGGTTACCAGCTGTGCATCAATGAACAGGAGGAGCTGGGACTTGTGGGCCCAGGAGGGAC 1511
Query 1015 ------------------------- 1014
Sbjct 1512 CACTGTCAGCAGCATCTGTGTCAGC 1536
