Nucleotide Global Alignment
Description
- Query:
- TRCN0000475160
- Subject:
- XM_011250027.2
- Aligned Length:
- 2836
- Identities:
- 847
- Gaps:
- 1865
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCCCAGCCCTTGTCCCGGCCCCTCATCCTATCCCAATTTCAGCCTTGGCCTCCGGCCACGCCCTCGCCCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTCCCAAACCTGTCCAGGCCCCGGCCGGTGTCCCAGCGAATGTCCAGGTCCAGGTCCCCGCTTCAACCCCGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGCCCCCAGCCTGGCCGCTATCTCCGCCTCGGCCCTTGTTCCACCCCTTGTCACAATTCCCAGCCCAGCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGACCCTGTCCCATTCCCCGCGTTTGCTTAAGCCCCTGGCCCAGCCACAGCCCTTGCTTCAATCTCCATCACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCACTCCTTCCATCACACCTTCTGCCCTTGTTTGAGCCCCGGTGCTCAGTTCAGCGCCACCCAAAAAAAGCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTCTTTGCCCCCATCTCTATGTTTGCCCAAGTCTCTTCCACTGGGTCCCCGCCTCTCTCATACTCTACCCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCCAGCCTCGACTCAGGTCTGGGCTCCAGCTGCCACCAGCCCTATTGCTGCTGTTGCTGTTTTCTGTCCTTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCAGGGGCTGGAGGCCTGTTCCTGACTGATTACTCCACCTGCTCGCCCCGCAAGCTCAGCCCCTTTCGCTCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGCCAGTACGGAGCTCTTCCACTTCCACGTTCCTGAGGACACGTTCCTGGCTGTTTGGAACCTCATCATCTTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGGAGCAGGGAGGAACCTTTGGGGACCACTGCCCAGACCAAAGCGTGACTGTGTATTTCCGCTCTGGAGCACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCCGTCATCAATCCGCTGCACACACACTTCCCAGCAGACACGGCTGTGCCTGGGGTTTTCTCACTGACCCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTGGACACTGCCCAACAGAACCTCAGGCATCTTCAACGTTAGCAGCCCCTTACCTGGGGACTGGTTCTTGGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCCACCTTCCCCAAGCCCATGGCCACATCTCTGTCAAGGGTCTCCAGGATGAATGTCAGTACCTGCTTCAGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACAACTGATTGTCCGACGACTGCTGGATGTGGCTGTACTGGTTCCTGGCCGTCCCTCAGAGCAAACCCTTTCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCATAATCGTTCAGCCTTGTACAAGGTCTTTGTGCCAAGCTTCACCTACAGGGTTTCAGCCCAGCTGGTGTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTAGGGGGTCGAGGGGCATCTGTCTGTCCCCTGACACTGCGCCTACGTCCCAAGGCTCCACCCCTACACAACTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGCTCTGTGGCCTGTGGAGGTGCCTCAGTATGCCAGCTGGAGTTGGCCTTGCCCCCCTGGGGCCACTGGGTCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGTGCGTGTGGAGACGCCATCCCGTGGTCCTGGCAGGACCATCAGCTTCCAGCTCTGTGTGCGGTTACAAGAG 1332
Query 1 ---------------------------------------------ATGAACATGCCCCAGTCCCTGGGCAACCA 29
|||||||||||||||||.||.||||.|||
Sbjct 1333 TGTCCACAACCCAGCCTGTCCCGTGCCTTGGTCCCTGGGGCTGCCATGAACATGCCCCAGTCACTAGGCACCCA 1406
Query 30 GCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGGGCCTGGGACCA-CGTCCCCACCCGAGCAC 102
|||||||||.||.||.||.||||||||.||.||.|||...||.|||.||||..||| .|..|||| |.||||||
Sbjct 1407 GCCACTGCCTCCGGAGCCACCATCCCTGGGGACTCCTATAGAAGGGTCTGGAGCCATAGCACCCA-CTGAGCAC 1479
Query 103 TGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCTCTGTCCACTTCTACATCTTCTTTGGCCC 176
||||||||||||||.||||||||||||||.||||||||.||||||||||||||||||||||||||.|||||.||
Sbjct 1480 TGCTGGCCAGTGCGTCCGACTCTGCGCAATGAGCTGGATACCTTCTCTGTCCACTTCTACATCTTTTTTGGTCC 1553
Query 177 AAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGAGGCG 250
.||.|||||||||||.||||||||||||||.||.||.|||.|||||||||||||.|||||||||||.||.||||
Sbjct 1554 CAGCGTGGCCCTTCCACCTGAGCGCCCAGCTGTATTTGCCCTGAGGCTGTTGCCGGTGCTGGACAGCGGGGGCG 1627
Query 251 TCCTCAGCCTGGAGCTCCAGCTCAATGCGAGCTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACT 324
||||.|||||||||||||||||||||||||||||..|||||||||||||.||.||.||.||.||||||.|||||
Sbjct 1628 TCCTTAGCCTGGAGCTCCAGCTCAATGCGAGCTCTCTGCGCCAGGAAAATGTAACAGTATTCGGATGCCTGACT 1701
Query 325 CACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTC 398
||.||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.||||||||.|||||
Sbjct 1702 CATGAGGTGCCCTTGAGCCTGGGGGATGCTGCTGTGACCTGTTCCAAAGAGTCCCTGGCAGGCTTCCTTCTCTC 1775
Query 399 TGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCC 472
.||||||||||||.||||.||.||||||||.||||||||||||||.|||||||||||||||||||||.||||||
Sbjct 1776 GGTCAGTGCCACCTCCAGAGTGGCCAGGCTTCGAATCCCATTCCCACAGACGGGGACCTGGTTCCTGACCCTCC 1849
Query 473 GCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTGTGGATGCGCACCTTC 546
|.||.||||||||||||||.||||||||.||||||||||||||.||.|||||.||.|||.||.||||.||||||
Sbjct 1850 GTTCTCTGTGCGGGGTGGGACCTCGGTTTGTGCGGTGCCGCAATGCAACGGCAGAAGTGCGGCTGCGTACCTTC 1923
Query 547 CTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGC 620
.||||||||||.|||||.|||||.||||||||.|||||||||||.|||||||||||.|||||.||.||||||||
Sbjct 1924 TTGTCCCCATGTGTGGATGACTGTGGGCCCTATGGCCAGTGCAAACTGCTGCGCACCCACAACTACCTGTACGC 1997
Query 621 AGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCC 694
.|||||||||||||||||.||||||.|.||||||||.|||||.||||||||.||.|||||||||||||||||||
Sbjct 1998 GGCCTGCGAGTGCAAGGCTGGGTGGCGGGGCTGGGGTTGCACAGACAGTGCCGACGCGCTCACCTATGGATTCC 2071
Query 695 AGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAGT 768
|||||||||||||||||||.||||||||||||||||||||||||.||||||||||||||||||||||||||||.
Sbjct 2072 AGCTGCTGTCCACACTCCTCCTCTGCCTGAGCAACCTCATGTTTTTGCCACCTGTGGTCCTGGCCATTCGGAGC 2145
Query 769 CGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGGTATGCGGTGGTGTCTGCATCTT 842
|||||.||||||||||||||.|||||||||||||||||||||||||||||| |..|
Sbjct 2146 CGATACGTGCTGGAAGCTGCCGTCTACACCTTCACCATGTTCTTCTCCACG-------------------TTCT 2200
Query 843 ATCACTGGGTGCTTGT----------GCATGGTGG-----TGGGTCACAGTC-----TGTATTTCCACCACGTT 896
|||| |||.||| ||||.|||| ||..|||..|.| ||||.||| .|||
Sbjct 2201 ATCA-----TGCCTGTGACCAGCCAGGCATTGTGGTTTTCTGTATCATGGACTATGATGTACTTC-----AGTT 2264
Query 897 CTCCGAGGGTT---TGGG------AATGTCTGTG-------CCTTCA-----CTGTGTCTTCTACAGACAGAGA 949
||..|| || |||| ||||||.||| ||.||| .||..||.|||.|||.|.|.||
Sbjct 2265 CTGTGA---TTTCCTGGGCTCCTTAATGTCCGTGTGGGTCACCGTCATAGCCATGGCTCGTCTGCAGCCTGTGA 2335
Query 950 --CAGCAG----------------------TGCTTCCCAAACTGTC-AT------------------GCATAGA 980
.||||| |||| .||||| || ||||.||
Sbjct 2336 TCAAGCAGGTGCTGTATCTGCTCGGGGCTATGCT------GCTGTCTATGGCTCTGCAGCTTGACCGGCATGGA 2403
Query 981 TAATG-----------------GTCATTTTTG-----------TAAGACACA--TTGGAGTAAA---------- 1014
...|| ||| |.|||| |..|.|||| |||| |.|
Sbjct 2404 CTCTGGAATCTGCTGGGACCCAGTC-TCTTTGCCCTCGGGATCTTGGCCACAGCTTGG---ACAGTTCGCAGCG 2473
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2474 TCCGGCGCCGGCACTGTTACCCACCGACATGGCGCCGCTGGCTTTTCTACCTGTGTCCCGGCAGCCTGATTGCT 2547
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2548 GGCAGTGCCGTTCTACTGTATGCTTTCGTGGAGACTCGGGACAACTACTTCTACATTCACAGCATTTGGCACAT 2621
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2622 GCTCATTGCTGGCAGTGTGGGCTTCCTGCTGCCTCCCCGTGCCAAGACTGACCGCCGGGTCCCTTCTGGAGCCC 2695
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 2696 GGGCCAGGGGCTGCGGTTACCAGCTGTGCATCAATGAACAGGAGGAGCTGGGACTTGTGGGCCCAGGAGGGACC 2769
Query 1015 ------------------------ 1014
Sbjct 2770 ACTGTCAGCAGCATCTGTGTCAGC 2793
