Nucleotide Global Alignment

Description

Query:
TRCN0000475378
Subject:
NM_001039211.3
Aligned Length:
1953
Identities:
1154
Gaps:
729

Alignment

Query    1  ATGTCGTGGCTCTTCGGCGTTAACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGTTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTACG-CCAAGGAGGC  221
                                                                        |.| |.|||||.||
Sbjct    1  ------------------------------------------------------------ATGTCAAAGGACGC  14

Query  222  CCTGAATCTGGCGCAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAGGCCG  295
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct   15  CCTGAATCTGGCGCAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAA-------------  75

Query  296  CCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACC  369
                                                                                      
Sbjct   76  --------------------------------------------------------------------------  75

Query  370  CGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCA  443
                                                                                      
Sbjct   76  --------------------------------------------------------------------------  75

Query  444  GCGACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCA  517
             |.||||.|||||||||   ||||||||||||||||||||||||||||||                        
Sbjct   76  -CAACTTGTCAATGAGG---ATTTACGGAAGCAGGAGGAGTCCGTGCAGA------------------------  121

Query  518  CCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCC  591
                                                                                      
Sbjct  122  --------------------------------------------------------------------------  121

Query  592  AAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGT  665
                                                                      ||||||.|||||||.|
Sbjct  122  ----------------------------------------------------------AGCACCATCAGACCTT  137

Query  666  CTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAG  739
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  138  CTTGGAGTCCATCAGGGCGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAG  211

Query  740  TGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACT  813
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  212  TGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACT  285

Query  814  GGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGC  887
            |||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct  286  GGCCGCTACATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTTGAGGC  359

Query  888  GCTGCGGCACCCCATC---CAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGC  958
            ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  360  GCTGCGGCACCCCATCCAGCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGC  433

Query  959  TTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTG  1032
            |||||||||||||||||||||||||||||||||||||||||...||.|||||||.|||||||||||||||||||
Sbjct  434  TTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAATGACAAGGAACATCAAGAAGAACCGGGGCCTG  507

Query 1033  TACAGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTC  1106
            ||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  508  TACAGGCACATCCTGCTGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTC  581

Query 1107  AGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACA  1180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  582  AGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACA  655

Query 1181  AGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACGCCTTCCTTCGG  1254
            ||||||||||||||||||||||||||||||||||||||||||||||..||||||||||.|||||||||||||||
Sbjct  656  AGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTCGG  729

Query 1255  AAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCACATGGGCCAACA  1328
            |||||||||||||||.||||||||.||||||||||.|||||||||||||||||||||||||.||.||||||.||
Sbjct  730  AAGCGAGCCACTGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAGCA  803

Query 1329  CAGCAACAAATTCATGCTGGTCCTGGCCAGCAATCTG----CCTGAGCAGTTCGACTGTGCCATCAACAGCC-G  1397
            |||||||||||||||||||.||||||||||    |||    ||.||||||||||||||.|||||||| .||| |
Sbjct  804  CAGCAACAAATTCATGCTGATCCTGGCCAG----CTGCCACCCCGAGCAGTTCGACTGGGCCATCAA-TGCCTG  872

Query 1398  CATTGACGTGATGGTCCACTTCGACCTGCCGCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGCATTTTGACA  1471
            |||.||||||||||||||||||||||||||...||||||||||||||.|||||||||||||.||.||.||.||.
Sbjct  873  CATCGACGTGATGGTCCACTTCGACCTGCCAGGGCAGGAGGAGCGGGCGCGCCTGGTGAGAATGTATCTTAACG  946

Query 1472  ACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGC  1545
            |.|.|||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct  947  AGTATGTTCTTAAGCCGGCCACAGAAGGAAAGCGGCGTCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGC  1020

Query 1546  TCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCAC  1619
            |..|||.|||||||||||||.|||||||||||..|||||.|||||||.||||||||||||||||||||||||||
Sbjct 1021  TTAGAGATCGCTCGGCTGACAGAGGGCATGTCATGCCGGAAGATCGCACAGCTGGCCGTGTCCTGGCAGGCCAC  1094

Query 1620  GGCATATGCCTCCAAGGACGGGGTCCTCACTGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCCAGCAGT  1693
            |||.|||||||||||||||||||||||.||.||||||||||||||||||||.||||||||...||||||||||.
Sbjct 1095  GGCGTATGCCTCCAAGGACGGGGTCCTGACCGAGGCCATGATGGACGCCTGCGTGCAAGACTTTGTCCAGCAGC  1168

Query 1694  ACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGAGTCCAA  1767
            |||..||||.|||||||||||||||||.||||.|||||||||.||.||.||||||.|||..||||         
Sbjct 1169  ACCAGCAGATGATGCGCTGGCTGAAGGGGGAGAGGCCTGGGCCCGAGGACGAGCAACCCTCATCC---------  1233

Query 1768  GGCGAGACCCTCACCTCATGGAGCCTGGCCACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTGCACATTTAG  1841
                                                                                      
Sbjct 1234  --------------------------------------------------------------------------  1233

Query 1842  GATATGCTCCTGGATGGGGACTGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGGCGGTCGGC  1915
                                                                                      
Sbjct 1234  --------------------------------------------------------------------------  1233

Query 1916  CGTTCTGCCCCCCAGGGCACCCCCTGTTG  1944
                                         
Sbjct 1234  -----------------------------  1233

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