Nucleotide Global Alignment
Description
- Query:
- TRCN0000475378
- Subject:
- NM_001039211.3
- Aligned Length:
- 1953
- Identities:
- 1154
- Gaps:
- 729
Alignment
Query 1 ATGTCGTGGCTCTTCGGCGTTAACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGTTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTACG-CCAAGGAGGC 221
|.| |.|||||.||
Sbjct 1 ------------------------------------------------------------ATGTCAAAGGACGC 14
Query 222 CCTGAATCTGGCGCAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAGGCCG 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 15 CCTGAATCTGGCGCAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAA------------- 75
Query 296 CCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACC 369
Sbjct 76 -------------------------------------------------------------------------- 75
Query 370 CGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCA 443
Sbjct 76 -------------------------------------------------------------------------- 75
Query 444 GCGACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCA 517
|.||||.||||||||| ||||||||||||||||||||||||||||||
Sbjct 76 -CAACTTGTCAATGAGG---ATTTACGGAAGCAGGAGGAGTCCGTGCAGA------------------------ 121
Query 518 CCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCC 591
Sbjct 122 -------------------------------------------------------------------------- 121
Query 592 AAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGT 665
||||||.|||||||.|
Sbjct 122 ----------------------------------------------------------AGCACCATCAGACCTT 137
Query 666 CTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAG 739
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 138 CTTGGAGTCCATCAGGGCGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAG 211
Query 740 TGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACT 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 TGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACT 285
Query 814 GGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGC 887
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 286 GGCCGCTACATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTTGAGGC 359
Query 888 GCTGCGGCACCCCATC---CAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGC 958
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GCTGCGGCACCCCATCCAGCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGC 433
Query 959 TTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTG 1032
|||||||||||||||||||||||||||||||||||||||||...||.|||||||.|||||||||||||||||||
Sbjct 434 TTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAATGACAAGGAACATCAAGAAGAACCGGGGCCTG 507
Query 1033 TACAGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTC 1106
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 508 TACAGGCACATCCTGCTGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTC 581
Query 1107 AGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACA 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 AGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACA 655
Query 1181 AGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACGCCTTCCTTCGG 1254
||||||||||||||||||||||||||||||||||||||||||||||..||||||||||.|||||||||||||||
Sbjct 656 AGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTCGG 729
Query 1255 AAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCACATGGGCCAACA 1328
|||||||||||||||.||||||||.||||||||||.|||||||||||||||||||||||||.||.||||||.||
Sbjct 730 AAGCGAGCCACTGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAGCA 803
Query 1329 CAGCAACAAATTCATGCTGGTCCTGGCCAGCAATCTG----CCTGAGCAGTTCGACTGTGCCATCAACAGCC-G 1397
|||||||||||||||||||.|||||||||| ||| ||.||||||||||||||.|||||||| .||| |
Sbjct 804 CAGCAACAAATTCATGCTGATCCTGGCCAG----CTGCCACCCCGAGCAGTTCGACTGGGCCATCAA-TGCCTG 872
Query 1398 CATTGACGTGATGGTCCACTTCGACCTGCCGCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGCATTTTGACA 1471
|||.||||||||||||||||||||||||||...||||||||||||||.|||||||||||||.||.||.||.||.
Sbjct 873 CATCGACGTGATGGTCCACTTCGACCTGCCAGGGCAGGAGGAGCGGGCGCGCCTGGTGAGAATGTATCTTAACG 946
Query 1472 ACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGC 1545
|.|.|||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct 947 AGTATGTTCTTAAGCCGGCCACAGAAGGAAAGCGGCGTCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGC 1020
Query 1546 TCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCAC 1619
|..|||.|||||||||||||.|||||||||||..|||||.|||||||.||||||||||||||||||||||||||
Sbjct 1021 TTAGAGATCGCTCGGCTGACAGAGGGCATGTCATGCCGGAAGATCGCACAGCTGGCCGTGTCCTGGCAGGCCAC 1094
Query 1620 GGCATATGCCTCCAAGGACGGGGTCCTCACTGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCCAGCAGT 1693
|||.|||||||||||||||||||||||.||.||||||||||||||||||||.||||||||...||||||||||.
Sbjct 1095 GGCGTATGCCTCCAAGGACGGGGTCCTGACCGAGGCCATGATGGACGCCTGCGTGCAAGACTTTGTCCAGCAGC 1168
Query 1694 ACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGAGTCCAA 1767
|||..||||.|||||||||||||||||.||||.|||||||||.||.||.||||||.|||..||||
Sbjct 1169 ACCAGCAGATGATGCGCTGGCTGAAGGGGGAGAGGCCTGGGCCCGAGGACGAGCAACCCTCATCC--------- 1233
Query 1768 GGCGAGACCCTCACCTCATGGAGCCTGGCCACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTGCACATTTAG 1841
Sbjct 1234 -------------------------------------------------------------------------- 1233
Query 1842 GATATGCTCCTGGATGGGGACTGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGGCGGTCGGC 1915
Sbjct 1234 -------------------------------------------------------------------------- 1233
Query 1916 CGTTCTGCCCCCCAGGGCACCCCCTGTTG 1944
Sbjct 1234 ----------------------------- 1233
