Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- NM_001285480.1
- Aligned Length:
- 1670
- Identities:
- 778
- Gaps:
- 802
Alignment
Query 1 ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCACGCGGACAAGTTAGGTGAGGTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAA 148
|||||.||.||||||.|.|||||||||||||||||||
Sbjct 1 -------------------------------------ATGCCTATACGTCGAGCCGTGAATTCTACCCGGGAAA 37
Query 149 CTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTC 222
||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 38 CTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACC------------------------------- 80
Query 223 TCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACC 296
|||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||.||
Sbjct 81 --------AGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC 146
Query 297 TGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGTCTA 364
|||||.||.||||||||||| |.||.||||||.||||||||.||||||||||||||||.||||||||||
Sbjct 147 TGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGATCAGTCTA 220
Query 365 AAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGGGCC 438
|||||||||||||||||||||||||.||.||||||.|||||||.||.||.||||||||||||||||||||||||
Sbjct 221 AAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCC 294
Query 439 CAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGCATG 512
||||.||||||.||.||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 295 CAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGCATG 368
Query 513 CTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGCTGG 586
|||||||||||.|||.||.||.||||||||.||||||||.||||||||.||||||||.||.|||||||..||||
Sbjct 369 CTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTCTGG 442
Query 587 AGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAAGGA 660
||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||||||||||||.||||||.||||||
Sbjct 443 AGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGAGGAGTCATCAGACAGGTAAAAGGA 516
Query 661 AAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAAGAA 734
||||||||.|||||.||||||||||||||.|||||||| ||||.|||||||||||||||.||||||||||||
Sbjct 517 AAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACCTCAGAAATCCAAAAACAGAAAGAA 587
Query 735 TAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTT 808
|.||||.||..|||||||||||||||||||||||.||||.|||||.|||||..||||.||||||||.||.|
Sbjct 588 ---GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACTCGGCTCT 658
Query 809 GTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTGGAC 882
||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||||||
Sbjct 659 GTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTACCCTAAGCTCAGAGTGGAC 732
Query 883 ATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAA 956
||||||||.|||.||||||||||.|||||||||.|||||||||||||.||||||.|.||.||||||||||||||
Sbjct 733 ATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGGCAA 806
Query 957 AGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC--------GTG------------------ 996
.|||||||||||||||||.| |||||| ||||....||| |||
Sbjct 807 GGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTGGAAGCCTGATGGAATATG 880
Query 997 ---------------TTGC--CCAGG-------------------------CTACTCTTGAA-------CTCCT 1021
|||| |||.| ||.||| |||| .||||
Sbjct 881 CAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCTC-TGAAGAAGTATGTCCT 953
Query 1022 GGGTTCAG------------------------------------------------------------------ 1029
|| ||
Sbjct 954 GG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCTGCAGAAATGTGAG 1023
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1024 AAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCTTCCCCTACTACCC 1097
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1098 TAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGATGACGATGACGATG 1171
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1172 AATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAGTCC 1245
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1246 CAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGGGAA 1319
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1320 AGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG 1393
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1394 TCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAGCGAAACTGCCCGGG 1467
Query 1030 ------------------------------------------ 1029
Sbjct 1468 AAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG 1509
