Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- NM_001356431.1
- Aligned Length:
- 1670
- Identities:
- 775
- Gaps:
- 805
Alignment
Query 1 ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCACGCGGACAAGTTAGGTGAGGTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAA 148
|||||.||.||||||.|.|||||||||||||||||||
Sbjct 1 -------------------------------------ATGCCTATACGTCGAGCCGTGAATTCTACCCGGGAAA 37
Query 149 CTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTC 222
||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 38 CTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACC------------------------------- 80
Query 223 TCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACC 296
|||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||.||
Sbjct 81 --------AGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC 146
Query 297 TGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGTCTA 364
|||||.||.||||||||||| |.||.||||||.||||||||.||||||||||||||||.||||||||||
Sbjct 147 TGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGATCAGTCTA 220
Query 365 AAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGGGCC 438
|||||||||||||||||||||||||.||.||||||.|||||||.||.||.||||||||||||||||||||||||
Sbjct 221 AAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCC 294
Query 439 CAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGCATG 512
||||.||||||.||.||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 295 CAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGCATG 368
Query 513 CTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGCTGG 586
|||||||||||.|||.||.||.||||||||.||||||||.||||||||.||||||||.||.|||||||..||||
Sbjct 369 CTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTCTGG 442
Query 587 AGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAAGGA 660
||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||||||||||||.||||||.||||||
Sbjct 443 AGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGAGGAGTCATCAGACAGGTAAAAGGA 516
Query 661 AAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAAGAA 734
||||||||.|||||.||||||||||||||.|||||||| ||||.|||||||||||||||.|||||||||
Sbjct 517 AAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACCTCAGAAATCCAAAAACAGAAA--- 584
Query 735 TAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTT 808
|.||||.||..|||||||||||||||||||||||.||||.|||||.|||||..||||.||||||||.||.|
Sbjct 585 ---GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACTCGGCTCT 655
Query 809 GTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTGGAC 882
||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||||||
Sbjct 656 GTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTACCCTAAGCTCAGAGTGGAC 729
Query 883 ATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAA 956
||||||||.|||.||||||||||.|||||||||.|||||||||||||.||||||.|.||.||||||||||||||
Sbjct 730 ATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGGCAA 803
Query 957 AGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC--------GTG------------------ 996
.|||||||||||||||||.| |||||| ||||....||| |||
Sbjct 804 GGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTGGAAGCCTGATGGAATATG 877
Query 997 ---------------TTGC--CCAGG-------------------------CTACTCTTGAA-------CTCCT 1021
|||| |||.| ||.||| |||| .||||
Sbjct 878 CAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCTC-TGAAGAAGTATGTCCT 950
Query 1022 GGGTTCAG------------------------------------------------------------------ 1029
|| ||
Sbjct 951 GG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCTGCAGAAATGTGAG 1020
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1021 AAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCTTCCCCTACTACCC 1094
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1095 TAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGATGACGATGACGATG 1168
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1169 AATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAGTCC 1242
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1243 CAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGGGAA 1316
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1317 AGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG 1390
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1391 TCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAGCGAAACTGCCCGGG 1464
Query 1030 ------------------------------------------ 1029
Sbjct 1465 AAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG 1506
