Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- XM_006538566.4
- Aligned Length:
- 1768
- Identities:
- 885
- Gaps:
- 767
Alignment
Query 1 --------------ATGG--CGACTGATACGTCTC-------------------AAGGTGAACTCGTC--CA-- 35
.||| ||||| |.||.|.| |..||.||||.||| ||
Sbjct 1 ATGCTCCGAGGCCTGTGGCCCGACT--TCCGCCGCGCCCTCCTCCCCTCGGCCTACTGTCAACTTGTCTTCAAG 72
Query 36 -----TCCTAA-------GGCACTCCCACTTATAGT-AGGAGCT------------------CAGCTGATCCAC 78
|.|.|| ||||| |||| ||..||| |.|||..|||.|
Sbjct 73 CCCGGTTCGAAAGATGCCGGCAC---------TAGTGAGTGGCTGCGGCGGGCCCGCCCTCCCGGCTTCTCCGC 137
Query 79 ----------------GCGGACAAGTTAGGTGAG------------GTAGAAGATAGCACCATGCCGATTCGTC 124
||.|.|| |||.| ||| |.||||||||.|||||||||.||.||||
Sbjct 138 CCCCGCCGCCGCCGTGGCCGCCA--TTACG-GAGTCCCCAGTGAAAGCAGAAGATACCACCATGCCTATACGTC 208
Query 125 GAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCA 198
||.|.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||.|||||||||
Sbjct 209 GAGCCGTGAATTCTACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACCAGAACCA 282
Query 199 GACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGA 272
||...||||||||||||||||.||||.||||||||||||||.||||||||.||||||||||||||.||.|||||
Sbjct 283 GATGGAAGTTCAGAGGAATCTATCTCTACTGTAGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGA 356
Query 273 GGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCA 340
||||||||||||.||||||||.|||||||.||.||||||||||| |.||.||||||.||||||||.|||
Sbjct 357 GGCAGAGCAGCCCAAGGGGGAGCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCA 430
Query 341 AAAAGGATGAGAAAGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTT 414
|||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||.|||||||.||.||.
Sbjct 431 AAAAGGATGAGAAGGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTC 504
Query 415 TCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAAT 488
||||||||||||||||||||||||||||.||||||.||.||||||||.||||||||.|||||||||||.|||||
Sbjct 505 TCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAAT 578
Query 489 CTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCC 562
|||||||||||||||||||||||||||||||||||.|||.||.||.||||||||.||||||||.||||||||.|
Sbjct 579 CTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTC 652
Query 563 ATAAGTATCCTTCTCTGGAGCTGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGA 636
|||||||.||.|||||||..||||||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||
Sbjct 653 ATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGA 726
Query 637 GGAGTCATCAAACAGGTTAAAGGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACC 710
||||||||||.||||||.||||||||||||||.|||||.||||||||||||||.|||||||| ||||.||||
Sbjct 727 GGAGTCATCAGACAGGTAAAAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACC 797
Query 711 TCAGAAATCCAGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCC 784
|||||||||||.||||||||| |.||||.||..|||||||||||||||||||||||.||||.|||||.|
Sbjct 798 TCAGAAATCCAAAAACAGAAA------GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTC 865
Query 785 TCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAG 858
||||..||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 866 TCCCGTTGGCTTTTACTCGGCTCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAG 939
Query 859 TATTATCCTAAGCTTAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGG 932
|||||.||||||||.|||||||||||||||||.|||.||||||||||.|||||||||.|||||||||||||.||
Sbjct 940 TATTACCCTAAGCTCAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGG 1013
Query 933 CCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC----- 993
||||.|.||.||||||||||||||.|||||||||||||||||.| |||||| ||||....|||
Sbjct 1014 CCAGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGC 1087
Query 994 ---GTG---------------------------------TTGC--CCAGG------------------------ 1005
||| |||| |||.|
Sbjct 1088 TGGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACC 1161
Query 1006 -CTACTCTTGAA-------CTCCTGGGTTCAG------------------------------------------ 1029
||.||| |||| .|||||| ||
Sbjct 1162 ACTGCTC-TGAAGAAGTATGTCCTGG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTG 1230
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1231 AAAAAAACCCTGCAGAAATGTGAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTT 1304
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1305 CCAGCTGTCCTTCCCCTACTACCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATG 1378
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1379 AAGATGAAGATGACGATGACGATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTA 1452
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1453 CAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAA 1526
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1527 AGTCCCGGCTGCCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCA 1600
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1601 GGAAAGCCAGACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCA 1674
Query 1030 ------------------------------------------------------------------ 1029
Sbjct 1675 CGAAAGGAAGCGAAACTGCCCGGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG 1740
