Nucleotide Global Alignment
Description
- Query:
- TRCN0000475906
- Subject:
- XM_030253220.1
- Aligned Length:
- 1670
- Identities:
- 812
- Gaps:
- 763
Alignment
Query 1 ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCACGCGGACAAGTTAGGTGAGGTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAA 148
|||||.||.||||||.|.|||||||||||||||||||
Sbjct 1 -------------------------------------ATGCCTATACGTCGAGCCGTGAATTCTACCCGGGAAA 37
Query 149 CTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTC 222
||||.|||||||||||.|||||||||||||||||||||||.|||||||||||...||||||||||||||||.||
Sbjct 38 CTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACCAGAACCAGATGGAAGTTCAGAGGAATCTATC 111
Query 223 TCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACC 296
||.||||||||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||.||
Sbjct 112 TCTACTGTAGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGAGCC 185
Query 297 TGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGTCTA 364
|||||.||.||||||||||| |.||.||||||.||||||||.||||||||||||||||.||||||||||
Sbjct 186 TGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGATCAGTCTA 259
Query 365 AAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGGGCC 438
|||||||||||||||||||||||||.||.||||||.|||||||.||.||.||||||||||||||||||||||||
Sbjct 260 AAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGGGCC 333
Query 439 CAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGCATG 512
||||.||||||.||.||||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 334 CAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGCATG 407
Query 513 CTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGCTGG 586
|||||||||||.|||.||.||.||||||||.||||||||.||||||||.||||||||.||.|||||||..||||
Sbjct 408 CTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTCTGG 481
Query 587 AGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAAGGA 660
||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||||||||||||.||||||.||||||
Sbjct 482 AGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGAGGAGTCATCAGACAGGTAAAAGGA 555
Query 661 AAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAAGAA 734
||||||||.|||||.||||||||||||||.|||||||| ||||.|||||||||||||||.||||||||||||
Sbjct 556 AAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACCTCAGAAATCCAAAAACAGAAAGAA 626
Query 735 TAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTT 808
|.||||.||..|||||||||||||||||||||||.||||.|||||.|||||..||||.||||||||.||.|
Sbjct 627 ---GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACTCGGCTCT 697
Query 809 GTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTGGAC 882
||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||||||
Sbjct 698 GTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTACCCTAAGCTCAGAGTGGAC 771
Query 883 ATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAA 956
||||||||.|||.||||||||||.|||||||||.|||||||||||||.||||||.|.||.||||||||||||||
Sbjct 772 ATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGGCAA 845
Query 957 AGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC--------GTG------------------ 996
.|||||||||||||||||.| |||||| ||||....||| |||
Sbjct 846 GGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTGGAAGCCTGATGGAATATG 919
Query 997 ---------------TTGC--CCAGG-------------------------CTACTCTTGAA-------CTCCT 1021
|||| |||.| ||.||| |||| .||||
Sbjct 920 CAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCTC-TGAAGAAGTATGTCCT 992
Query 1022 GGGTTCAG------------------------------------------------------------------ 1029
|| ||
Sbjct 993 GG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCTGCAGAAATGTGAG 1062
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1063 AAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCTTCCCCTACTACCC 1136
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1137 TAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGATGACGATGACGATG 1210
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1211 AATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAGTCC 1284
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1285 CAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGGGAA 1358
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1359 AGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCTCTCCCTCAG 1432
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1433 TCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAGCGAAACTGCCCGGG 1506
Query 1030 ------------------------------------------ 1029
Sbjct 1507 AAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG 1548
