Nucleotide Global Alignment

Description

• Query: TRCN0000476234
• Subject: NM_001111022.2
• Aligned Length: 1440
• Identities: 1092
• Gaps: 237

Alignment

Query    1  ATGGCTTCAGACAGCATATTTGAGTCATTTCCTTCGTACCCACAGTGCTTCATGAGAGAATGCATACTTGGAAT  74
            |||||||||||||||||.|||||||||||||||||.||.||||||||||||||||||                 
Sbjct    1  ATGGCTTCAGACAGCATTTTTGAGTCATTTCCTTCATATCCACAGTGCTTCATGAGA-----------------  57

Query   75  GAATCCTTCTAGAGACGTCCACGATGCCAGCACGAGCCGCCGCTTCACGCCGCCTTCCACCGCGCTGAGCCCAG  148
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct   58  ----------------------GATGCCAGCACGAGCCGCCGCTTCACGCCGCCTTCCACCGCGCTGAGCCCCG  109

Query  149  GCAAGATGAGCGAGGCGTTGCCGCTGGGCGCCCCGGACGCCGGCGCTGCCCTGGCCGGCAAGCTGAGGAGCGGC  222
            |||||||||||||||||.|||||||||||||||||||.|.||||||.|||||||||.|||||||||||||||||
Sbjct  110  GCAAGATGAGCGAGGCGCTGCCGCTGGGCGCCCCGGATGGCGGCGCCGCCCTGGCCAGCAAGCTGAGGAGCGGC  183

Query  223  GACCGCAGCATGGTGGAGGTGCTGGCCGACCACCCGGGCGAGCTGGTGCGCACCGACAGCCCCAACTTCCTCTG  296
            ||||||||||||||||||||.||.||.||||||||.||||||||.|||||||||||||||||||||||||||||
Sbjct  184  GACCGCAGCATGGTGGAGGTACTAGCTGACCACCCTGGCGAGCTAGTGCGCACCGACAGCCCCAACTTCCTCTG  257

Query  297  CTCCGTGCTGCCTACGCACTGGCGCTGCAACAAGACCCTGCCCATCGCTTTCAAGGTGGTGGCCCTAGGGGATG  370
            |||||||||.||.||.|||||||||||||||||||||||||||||||||||||||||||||||.||.|||||.|
Sbjct  258  CTCCGTGCTACCCACTCACTGGCGCTGCAACAAGACCCTGCCCATCGCTTTCAAGGTGGTGGCACTGGGGGACG  331

Query  371  TTCCAGATGGCACTCTGGTCACTGTGATGGCTGGCAATGATGAAAACTACTCGGCTGAGCTGAGAAATGCTACC  444
            |.||.|||||||||||||||||.||.|||||.|||||.|||||||||||||||||.||.|||||||||||||||
Sbjct  332  TCCCGGATGGCACTCTGGTCACCGTCATGGCAGGCAACGATGAAAACTACTCGGCAGAACTGAGAAATGCTACC  405

Query  445  GCAGCCATGAAGAACCAGGTTGCAAGATTTAATGACCTCAGGTTTGTCGGTCGAAGTGGAAGAGGGAAAAGCTT  518
            ||.|||||||||||||||||.||.|||||.||.|||||||||||||||||.||.||.||.|||||.||.|||||
Sbjct  406  GCGGCCATGAAGAACCAGGTAGCGAGATTCAACGACCTCAGGTTTGTCGGGCGGAGCGGTAGAGGCAAGAGCTT  479

Query  519  CACTCTGACCATCACTGTCTTCACAAACCCACCGCAAGTCGCCACCTACCACAGAGCCATCAAAATCACAGTGG  592
            |||||||||||||||.|||||.|||||.||.||.|||||.|||||||||||.||||||||||||||||||||||
Sbjct  480  CACTCTGACCATCACCGTCTTTACAAATCCGCCACAAGTTGCCACCTACCATAGAGCCATCAAAATCACAGTGG  553

Query  593  ATGGGCCCCGAGAACCTCGAAGACATCGGCAGAAACTAGATGATCAGACCAAGCCCGGGAGCTTGTCCTTTTCC  666
            |.||.|||||||||||.||||                                                     
Sbjct  554  ACGGCCCCCGAGAACCCCGAA-----------------------------------------------------  574

Query  667  GAGCGGCTCAGTGAACTGGAGCAGCTGCGGCGCACAGCCATGAGGGTCAGCCCACACCACCCAGCCCCCACGCC  740
                                                                                      
Sbjct  575  --------------------------------------------------------------------------  574

Query  741  CAACCCTCGTGCCTCCCTGAACCACTCCACTGCCTTTAACCCTCAGCCTCAGAGTCAGATGCAGGATACAAGGC  814
                                                                             ||.|.||||
Sbjct  575  -----------------------------------------------------------------ATGCCAGGC  583

Query  815  AGATCCAACCATCCCCACCGTGGTCCTACGATCAGTCCTACCAATACCTGGGATCCATTGCCTCTCCTTCTGTG  888
            |||||||.||||||||||||||||||||.||.|||||||||||.||||||||||||||..|||||.|.|||||.
Sbjct  584  AGATCCAGCCATCCCCACCGTGGTCCTATGACCAGTCCTACCAGTACCTGGGATCCATCACCTCTTCCTCTGTC  657

Query  889  CACCCAGCAACGCCCATTTCACCTGGACGTGCCAGCGGCATGACAACCCTCTCTGCAGAACTTTCCAGTCGACT  962
            ||||||||.||.|||||||||||.||.|||||||||||||||||.|.|||||||||||||||||||||||||||
Sbjct  658  CACCCAGCGACACCCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGACT  731

Query  963  CTCAACGGCACCCGACCTGACAGCGTTCAGCGACCCGCGCCAGTTCCCCGCGCTGCCCTCCATCTCCGACCCCC  1036
            |||||||||.||.||||||||.||.|||.|||||||.|||||||||||..|.|||||.||||||||||||||.|
Sbjct  732  CTCAACGGCTCCGGACCTGACCGCCTTCGGCGACCCACGCCAGTTCCCTACTCTGCCGTCCATCTCCGACCCGC  805

Query 1037  GCATGCACTATCCAGGCGCCTTCACCTACTCCCCGACGCCGGTCACCTCGGGCATCGGCATCGGCATGTCGGCC  1110
            ||||||||||.|||||||||||||||||||   ||.||||.|||||.|||||||||||||||||||||||.|||
Sbjct  806  GCATGCACTACCCAGGCGCCTTCACCTACT---CGCCGCCCGTCACGTCGGGCATCGGCATCGGCATGTCAGCC  876

Query 1111  ATGGGCTCGGCCACGCGCTACCACACCTACCTGCCGCCGCCCTACCCCGGCTCGTCGCAAGCGCAGGGAGGCCC  1184
            |||.||||||||.|.||||||||||||||||||||||||||||||||||||||.||.||.|||||||..||.||
Sbjct  877  ATGAGCTCGGCCTCTCGCTACCACACCTACCTGCCGCCGCCCTACCCCGGCTCATCACAGGCGCAGGCCGGGCC  950

Query 1185  GTTCCAAGCCAGCTCGCCCTCCTACCACCTGTACTACGGCGCCTCGGCCGGCTCCTACCAGTTCTCCATGGTGG  1258
            .|||||..||.||||||||||||||||.||.||||||||||||||||||||.||||||||||||||||||||||
Sbjct  951  CTTCCAGACCGGCTCGCCCTCCTACCATCTATACTACGGCGCCTCGGCCGGTTCCTACCAGTTCTCCATGGTGG  1024

Query 1259  GCGGCGAGCGCTCGCCGCCGCGCATCCTGCCGCCCTGCACCAACGCCTCCACCGGCTCCGCGCTGCTCAACCCC  1332
            ||||.|||.|.|||||.|||||||||||||||||||||||||||||.|||||||||.|||||||||||||||||
Sbjct 1025  GCGGAGAGAGATCGCCCCCGCGCATCCTGCCGCCCTGCACCAACGCATCCACCGGCGCCGCGCTGCTCAACCCC  1098

Query 1333  AGCCTCCCGAACCAGAGCGACGTGGTGGAGGCCGAGGGCAGCCACAGCAACTCCCCCACCAACATGGCGCCCTC  1406
            ||||||||.|.|||||||||||||||||||.|||||||||||||.||||||||.|||||||||||   ||||.|
Sbjct 1099  AGCCTCCCCAGCCAGAGCGACGTGGTGGAGACCGAGGGCAGCCATAGCAACTCGCCCACCAACAT---GCCCCC  1169

Query 1407  CGCGCGCCTGGAGGAGGCCGTGTGGAGGCCCTAC  1440
            |||||||||||||||||||||||||.||||||||
Sbjct 1170  CGCGCGCCTGGAGGAGGCCGTGTGGCGGCCCTAC  1203