Nucleotide Global Alignment
Description
- Query:
- TRCN0000477616
- Subject:
- XR_001778433.1
- Aligned Length:
- 2048
- Identities:
- 1040
- Gaps:
- 838
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCCCGCCTGCCGGCCCCGCCCCCCAGCCGCCATTGACAGTGTAGGCTCGCACTTCCTTGCAGAGGGATGGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTTCGGGCGGGCCCGGTAGCCCCGCAGTGTGCGCTGCTCTGGTAGCGGCTCGCAAGCGGGCGCGATCCGGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCGCGGGTGCACAGGTGCGGCCCACGCCTCCCTCGGCGCCTCAGCACCTTCGGGGCGGGACGCGGGACGGTCTG 222
Query 1 ---------ATGATGGAGGGAAGCAGGCAGACGCGAGTGTCTCGGCCATACAAGATCAGCGAATCATCAAAGGT 65
|..|||||||.|||||.|||||.|||.||.||.|||||||||||.|||||.||.||.||||||||
Sbjct 223 AGATTGGTCACAATGGAGGCAAGCAAGCAGATGCGGGTATCCCGGCCATACAAAATCAGTGAGTCTTCAAAGGT 296
Query 66 ATACCGCTGGGCCGACCACTCAAGCACGGTGCTGCAGCGGCTGAACGAGCAGCGTCTCCGCGGGCTCTTCTGCG 139
.||||.||||.|.||||||||.|...||||||||||||||||||||||||||||.||.|.|||.||||||||||
Sbjct 297 GTACCACTGGCCTGACCACTCTACTGCGGTGCTGCAGCGGCTGAACGAGCAGCGGCTGCACGGCCTCTTCTGCG 370
Query 140 ACGTCGTCCTGGTGGCCGATGAGCAGCGTGTGCCAGCCCATCGCAACCTGCTGGCCGTGTGCAGCGACTACTTC 213
||||.||.|||||||.|||.|||||||..|||||||||||.||||||||.|||||.||||||||||||||||||
Sbjct 371 ACGTGGTGCTGGTGGTCGAAGAGCAGCAAGTGCCAGCCCACCGCAACCTTCTGGCTGTGTGCAGCGACTACTTC 444
Query 214 AACTCCATGTTCACCATCGGCATGCGGGAAGCTTTCCAGAAGGAGGTGGAGCTGATCGGCGCCTCCTACATTGG 287
||||||||||||||..|.||||||||.|||||||||||||||||||||||||||.|.|||.||||||||.|.||
Sbjct 445 AACTCCATGTTCACACTGGGCATGCGCGAAGCTTTCCAGAAGGAGGTGGAGCTGGTGGGCACCTCCTACGTGGG 518
Query 288 GCTCAAGGCCGTGGTGGACTTCCTGTACGGCGGGGAGCTGGTGCTGGATGGCGGCAACATTGACTACGTCCTGG 361
|||||||||||||||.||.|||||.|||.||.|.|||||||.||||||.|||.||||||||||||||.||||||
Sbjct 519 GCTCAAGGCCGTGGTAGATTTCCTCTACAGCAGCGAGCTGGAGCTGGACGGCAGCAACATTGACTACATCCTGG 592
Query 362 AGACGGCTCACCTGCTGCAGATCTGGACGGTGGTAGACTTCTGCTGTGAGTACCTGGAGCAGGAGGTGAGCGAG 435
|||||||.||.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||||||
Sbjct 593 AGACGGCGCATCTGCTGCAGATCTGGACCGTGGTGGATTTCTGCTGTGAGTACCTGGAGCAGGAGGTGAGCGAG 666
Query 436 GACAACTACCTGTACCTGCAGGAGCTGGCCTCCATCTACAGCCTCAAGCGGCTTGATGCCTTCATCGATGGCTT 509
||||||||.||.|||||.|||||||||||||||||||||||.||||||.||||.|||||||||||||||.||||
Sbjct 667 GACAACTATCTCTACCTACAGGAGCTGGCCTCCATCTACAGTCTCAAGAGGCTCGATGCCTTCATCGATAGCTT 740
Query 510 CATCCTGAACCACTTCGGCACGCTGTCCTTTACGCCCGACTTCCTGCAGAACGTCTCCATGCAGAAGCTGTGTG 583
|.|.||||.|||||||.|||||||||||||.|||||.||||||||||||..|.|||||.|||||||||||||||
Sbjct 741 CGTACTGAGCCACTTCAGCACGCTGTCCTTCACGCCTGACTTCCTGCAGTCCATCTCCGTGCAGAAGCTGTGTG 814
Query 584 TCTACCTGAGCAGCAGCGAGGTGCAGCGGGAGTGTGAGCACGACCTCTTGCAGGCCGCCCTGCAGTGGCTGACG 657
|||||||||||||..||.||||.||||...|.||.||..|||||||..||||||..||.|||||||||||.|||
Sbjct 815 TCTACCTGAGCAGTGGCCAGGTACAGCACAAATGGGAATACGACCTGCTGCAGGTGGCTCTGCAGTGGCTCACG 888
Query 658 CAGCAGCCCGAGCGCGAGGCCCACGCCCGCCAGGTGCTGGAGAACATCCACTTCCCGCTCATCCCCAAGAACGA 731
||||||||.||||||||||..|||.||||||..||.|||||||||||||.||||||.|||.|||||.||.||..
Sbjct 889 CAGCAGCCGGAGCGCGAGGTGCACACCCGCCGCGTTCTGGAGAACATCCGCTTCCCCCTCTTCCCCGAGGACAT 962
Query 732 CCTGCTGCACCGCGTCAAGCCGGCCGTGTGCTCGCTGCTGCCCAAGGAGGCCAACTGCGAGGGCTTCATCGAGG 805
||||||.||.||.||.||||.||||.|||||||.||||||||||..|||||||||.||||||||||..|.||||
Sbjct 963 CCTGCTACAGCGGGTGAAGCTGGCCATGTGCTCTCTGCTGCCCAGCGAGGCCAACGGCGAGGGCTTTGTGGAGG 1036
Query 806 AGGCCGTGCGCTACCACAACAACCTGGCGGCCCAGCCCGTCATGCAGACCAAGCGCACGGCGCTGCGCACCAAC 879
|||||.|||.|||||||||||.|||||.|||||||||.|||.|||||||.|||||.|||..|||||||.| |
Sbjct 1037 AGGCCATGCACTACCACAACAGCCTGGTGGCCCAGCCTGTCCTGCAGACGAAGCGAACGCTGCTGCGCTC---C 1107
Query 880 CAGGAGCGCCTGCTGTTTGTGGGCGGCGAGGTCTCCGAGCGGTGTCTGGAGCTCAGTGACGACACCTGCTACCT 953
.|||||.||.||||.||.|||||.|||||||||||.|||||||||||||||||.||.||.||||||||||||||
Sbjct 1108 GAGGAGTGCTTGCTCTTCGTGGGGGGCGAGGTCTCTGAGCGGTGTCTGGAGCTGAGCGATGACACCTGCTACCT 1181
Query 954 GGACGCCAAGAGCGAGCAGTGGGTCAAAGAGACGCCGCTGCCCGCCCGGCGGAGCCACCACTGTGTCGCGGTGC 1027
.|||.||||||..|||||||||||.||.|||||..|.|||||.|||||.||||||||||||||.|||||.||||
Sbjct 1182 AGACACCAAGAATGAGCAGTGGGTGAAGGAGACATCCCTGCCGGCCCGCCGGAGCCACCACTGCGTCGCTGTGC 1255
Query 1028 TGGGGGGCTTCATCTTCATCGCCGGCGGCAGCTTCTCACGGGACAACGGAGGGGATGCGGCCTCCAATCTTCTT 1101
|||||||||||||||||||.|||||.|||||||||||..|.||||||||||||.||||.||||||||.||||||
Sbjct 1256 TGGGGGGCTTCATCTTCATTGCCGGGGGCAGCTTCTCGAGAGACAACGGAGGGAATGCCGCCTCCAACCTTCTT 1329
Query 1102 TAT----------------------------------------------------------------------- 1104
|||
Sbjct 1330 TATAGGTGGCGTCCATGAACCAGCGCCGTGTGGATTTCTACCTAGCTTCCATTGAAGACATGCTGGTGGCTGTC 1403
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1404 GGTGGCCGGAACGAGAATGGAGCGCTGTCTTCTGTAGAGACCTACAGCCCCAAGACCAACTCCTGGACCTACGT 1477
Query 1105 -------------AGGTTCACGTACGGCCACGCGGGCACCATCTACAAAGACTTCGTGTACATCTCGGGGGGCC 1165
||||||||.||.|||||||||||||||||||||||||||||.||.||||||||.|||||||
Sbjct 1478 GGCCGGCTTGCCAAGGTTCACCTATGGCCACGCGGGCACCATCTACAAAGACTTTGTCTACATCTCAGGGGGCC 1551
Query 1166 ACGACTACCAAATTGGCCCCTACCGCAAGAACCTGCTATGCTACGACCACCGGACAGACGTGTGGGAGGAGCGG 1239
||||||||||.||||||||.|||||||||||||||||.||.||.||||
Sbjct 1552 ACGACTACCAGATTGGCCCGTACCGCAAGAACCTGCTGTGTTATGACC-------------------------- 1599
Query 1240 CGGCCCATGACCACGGCGCGCGGCTGGCACAGCATGTGCAGCCTGGGTGACAGCATCTACTCCATCGGGGGCAG 1313
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 1314 CGATGACAACATCGAGTCCATGGAGCGCTTCGACGTGCTGGGCGTGGAGGCCTACAGCCCGCAGTGCAACCAGT 1387
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 1388 GGACCCGCGTGGCGCCGCTGCTGCACGCCAACAGCGAGTCGGGCGTGGCAGTGTGGGAGGGCCGCATCTACATC 1461
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 1462 CTGGGCGGCTACAGCTGGGAGAACACTGCCTTCTCCAAGACCGTGCAGGTGTACGACCGCGAGGCCGACAAGTG 1535
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 1536 GAGCAGGGGCGTCGACCTGCCCAAGGCCATCGCTGGCGGGTCCGCCTGTGTCTGCGCCCTGGAGCCACGGCCAG 1609
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 1610 AGGACAAGAAGAAGAAAGGCAAAGGCAAGAGGCACCAGGACCGGGGCCAG 1659
Sbjct 1600 -------------------------------------------------- 1599
