Nucleotide Global Alignment
Description
- Query:
- TRCN0000477624
- Subject:
- XM_017015233.1
- Aligned Length:
- 2585
- Identities:
- 1248
- Gaps:
- 1303
Alignment
Query 1 ATGGACATACAGCTGGACCCTGCCAGAGATGACCTGCCTCTCATGGCCAACACCAGCCACATACTTGTGAAGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTATGTACTGGATTTGGATGTGGATTTTGAAAGTCAAGTCATTGAGGGGACCATAGTGCTTTTCCTCGAGGATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GAAACAGATTCAAGAAACAGAATAGCTCTATTGAGGAAGCCTGCCAATCAGAATCAAACAAAGCCTGCAAATTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGGATGCCTGAACCCTGCCATATTCCCGTGACAAATGCAAGGACCTTCTCATCTGAAATGGAATATAATGATTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGCAATCTGTAGTAAAGGTGAAAAAGATACTTCTGATAAAGATGGTAACCATGACAACCAGGAACATGCTTCTG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GGATTTCTAGCTCAAAGTACTGCTGTGACACAGGGAATCATGGGAGTGAGGATTTTTTGCTAGTGTTGGACTGC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TGTGATTTATCTGTGTTAAAAGTCGAGGAGGTGGATGTTGCTGCTGTGCCAGGTCTGGAAAAATTTACAAGGTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TCCTGAGCTCACGGTTGTTTCTGAGGAGTTCAGGAATCAGATTGTACGTGAACTTGTGACTTTGCCTGCAAATC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GTTGGAGGGAGCAGTTAGACTATTACGCTCGCTGCAGCCAGGCTCCTGGCTGTGGGGAACTCCTCTTTGACACT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GACACTTGGAGCTTGCAGATAAGGAAGACAGGGGCTCAGACAGCTACTGACTTTCCTCATGCTATCAGGATATG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GTACAAAACTAAACCTGAAGGGCGATCGGTTACATGGACCTCAGACCAGAGTGGCAGGCCATGTGTTTATACTG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TGGGATCTCCCATAAACAACAGGGCCCTTTTTCCATGCCAGGAGCCACCCGTTGCCATGTCAACATGGCAGGCT 888
||||||||||||||||||
Sbjct 1 --------------------------------------------------------ATGTCAACATGGCAGGCT 18
Query 889 ACAGTTCGAGCAGCTGCATCTTTTGTTGTTTTAATGAGTGGGGAAAATTCTGCCAAACCAACGCAGCTTTGGGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19 ACAGTTCGAGCAGCTGCATCTTTTGTTGTTTTAATGAGTGGGGAAAATTCTGCCAAACCAACGCAGCTTTGGGA 92
Query 963 AGAGTGCTCAAGCTGGTATTACTATGTAACTATGCCAATGCCAGCCTCCACCTTCACAATTGCAGTGGGATGCT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 93 AGAGTGCTCAAGCTGGTATTACTATGTAACTATGCCAATGCCAGCCTCCACCTTCACAATTGCAGTGGGATGCT 166
Query 1037 GGACAGAAATGAAGATGGAGACATGGTCATCAAATGATTTGGCAACAGAGAGACCCTTCTCACCTTCTGAGGCC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 GGACAGAAATGAAGATGGAGACATGGTCATCAAATGATTTGGCAACAGAGAGACCCTTCTCACCTTCTGAGGCC 240
Query 1111 AACTTCAGGCATGTTGGTGTTTGCAGTCACATGGAATACCCCTGCCGCTTCCAGAATGCTTCTGCCACCACCCA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AACTTCAGGCATGTTGGTGTTTGCAGTCACATGGAATACCCCTGCCGCTTCCAGAATGCTTCTGCCACCACCCA 314
Query 1185 GGAGATCATTCCTCATCGGGTCTTTGCCCCTGTGTGCCTCACGGGTGCCTGCCAAGAGACCCTTCTGCGGCTGA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 GGAGATCATTCCTCATCGGGTCTTTGCCCCTGTGTGCCTCACGGGTGCCTGCCAAGAGACCCTTCTGCGGCTGA 388
Query 1259 TCCCTCCTTGCCTCTCAGCAGCACATTCTGTTCTGGGAGCACACCCGTTCTCTCGGCTGGATGTTCTCATCGTC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 389 TCCCTCCTTGCCTCTCAGCAGCACATTCTGTTCTGGGAGCACACCCGTTCTCTCGGCTGGATGTTCTCATCGTC 462
Query 1333 CCTGCCAACTTTCCAAGTCTGGGGATGGCC-------------------------------------------- 1362
||||||||||||||||||||||||||||||
Sbjct 463 CCTGCCAACTTTCCAAGTCTGGGGATGGCCAGCCCACACATCATGTTCCTCTCTCAGAGCATCTTGACAGGAGG 536
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 537 GAACCATCTCTGTGGGACCCGCCTCTGCCATGAAATTGCCCATGCCTGGTTTGGCCTAGCCATCGGGGCCCGAG 610
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 611 ACTGGACGGAGGAGTGGCTGAGTGAAGGCTTCGCCACTCACTTGGAGGATGTGTTTTGGGCCACAGCACAGCAG 684
Query 1363 -------------------------------------------------------------------------- 1362
Sbjct 685 CTGGCCCCCTATGAGGCCCGGGAGCAGCAGGAGCTGAGGGCTTGTCTGCGCTGGCGTCGCCTCCAGGACGAGAT 758
Query 1363 -------------------------------AGACCCAGTAAAGACAAAACTGGCCACACAAGTGACTCGGGAG 1405
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 759 GCAATGCTCCCCCGAGGAGATGCAGGTGTTAAGACCCAGTAAAGACAAAACTGGCCACACAAGTGACTCGGGAG 832
Query 1406 CATCTGTTATCAAGCATGGACTTAATCCGGAGAAGATCTTCATGCAGGTGCATTATTTAAAGGGCTACTTCCTT 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 CATCTGTTATCAAGCATGGACTTAATCCGGAGAAGATCTTCATGCAGGTGCATTATTTAAAGGGCTACTTCCTT 906
Query 1480 CTTCGGTTTCTTGCCAAAAGACTTGGAGATGAAACCTATTTTTCATTTTTAAGAAAATTTGTGCACACATTTCA 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 CTTCGGTTTCTTGCCAAAAGACTTGGAGATGAAACCTATTTTTCATTTTTAAGAAAATTTGTGCACACATTTCA 980
Query 1554 TGGACAGCTGATTCTTTCCCAGGATTTCCTTCAAATGCTACTGGAGAACATTCCAGAAGAAAAAAGGCTTGAGC 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 981 TGGACAGCTGATTCTTTCCCAGGATTTCCTTCAAATGCTACTGGAGAACATTCCAGAAGAAAAAAGGCTTGAGC 1054
Query 1628 TGTCTGTTGAAAACATCTACCAAGACTGGCTTGAGAGTTCCGGAATACCAAAGCCGCTGCAGAGGGAGCGTCGC 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 TGTCTGTTGAAAACATCTACCAAGACTGGCTTGAGAGTTCCGGAATACCAAAGCCGCTGCAGAGGGAGCGTCGC 1128
Query 1702 GCCGGGGCGGAGTGCGGGCTTGCGCGGCAAGTGCGCGCCGAGGTCACGAAATGGATTGGAGTGAACCGGAGACC 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 GCCGGGGCGGAGTGCGGGCTTGCGCGGCAAGTGCGCGCCGAGGTCACGAAATGGATTGGAGTGAACCGGAGACC 1202
Query 1776 CCGAAAACGGAAGCGCAGGGAGAAGGAAGAGGTGTTTGAAAAGCTTCTTCCAGACCAGCTGGTCTTGCTTCTGG 1849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 CCGAAAACGGAAGCGCAGGGAGAAGGAAGAGGTGTTTGAAAAGCTTCTTCCAGACCAGCTGGTCTTGCTTCTGG 1276
Query 1850 AGCATCTCTTGGAGCAGAAGACTCTGAGCCCCCGAACTCTGCAAAGCCTCCAGAGGACATACCACCTCCAGGAT 1923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1277 AGCATCTCTTGGAGCAGAAGACTCTGAGCCCCCGAACTCTGCAAAGCCTCCAGAGGACATACCACCTCCAGGAT 1350
Query 1924 CAGGATGCAGAGGTTCGCCATCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAGCCTACAAAAGTGT 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1351 CAGGATGCAGAGGTTCGCCATCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAGCCTACAAAAGTGT 1424
Query 1998 GGAGAGGTTCCTTCAGGAGGATCAGG-----CCA---------------------------------TGGGTG- 2032
|||||||||||||||||||||||||| ||| ||||.|
Sbjct 1425 GGAGAGGTTCCTTCAGGAGGATCAGGAAAGACCACAGCAAGATTCTTTCATTCGTCTCCTCCTAGCCTGGGGGA 1498
Query 2033 ------------------TGTACCTCTACGGGGAGCTGATGGTGAGTGAGGACGCCA------GACAGCAGCAG 2082
||.||.||.|.||.|.|.|.|| |||..||...|.|||| .||||| .|.|
Sbjct 1499 CCAGGCTCGAACTGACCCTGGACATCAAAGGAGGGATTAT-GTGGCTGCTAAAGCCATCGGCCCACAGC-CCTG 1570
Query 2083 CTCGCCCGTAGGTGCTTC---------GAG--CGGACC-----------------AAGGAGCAGA--------- 2119
.||.|...|.|||||||| ||| .||.|| ||| |||||
Sbjct 1571 TTCACATCTTGGTGCTTCTCTTTCCCAGAGGCTGGTCCCAGCCAGGCACACACAAAAG--GCAGATTCTCGTAA 1642
Query 2120 ----------------TGGATAGG-----TCCTCAGCCCAGG---TGGTG----GCCGAAATGTTATTT 2160
||| ||| |||| ||||.|| |||.| ||.|...||..||||
Sbjct 1643 ACGCAGCCTCCCTCCCTGG--AGGCTGCCTCCT--GCCCTGGATCTGGAGTGGAGCTGCTCTGAGATTT 1707
