Nucleotide Global Alignment
Description
- Query:
- TRCN0000477990
- Subject:
- XM_005273498.4
- Aligned Length:
- 2447
- Identities:
- 575
- Gaps:
- 1849
Alignment
Query 1 ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ATTTGGAAATGTCATCCGATGGCACAATCAGGAAACAGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGATCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTTTGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACCTTCATGAAAACAGAATCATCCATCGGGATCTAAAGCCA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGACCTAGGATATGCCAAGGAGCT 518
|||||||||||||
Sbjct 1 -------------------------------------------------------------ATGCCAAGGAGCT 13
Query 519 GGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAGA 592
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14 GGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACC--------------------------- 60
Query 593 AGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTTC 666
Sbjct 61 -------------------------------------------------------------------------- 60
Query 667 CTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ------------------------TGGCATTCAAAAGTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGA 110
Query 741 AGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111 AGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGC 184
Query 815 GACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 GACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCC 258
Query 889 AATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 AATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCAC 332
Query 963 CATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 333 CATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCA 406
Query 1037 TCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 TCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGT 480
Query 1111 ATTTCAGACGGCAAG----GTGAGCCCTGGCTTCGTACACAC----------CATCCTGTTTACCTTGGCTGTG 1170
||||||||||||||| .|||| ||| ||||| .|||.||||| ||..||.||
Sbjct 481 ATTTCAGACGGCAAGTTAAATGAG----GGC------CACACATTGGACATGGATCTTGTTT---TTCTCTTTG 541
Query 1171 CCTCCTGGGAAACTCAAC----ACACTTTCAGATTT-----------CAATTCTGCTT-----TGTCA--TGTA 1222
.|..| .|.|||.|||.| |.|| ||||||.| ||| |.| ||||| ||||
Sbjct 542 ACAAC-AGTAAAATCACCTATGAGAC--TCAGATCTCCCCACGGCCCCAA-----CCTGAAAGTGTCAGCTGTA 607
Query 1223 GTCTGTTAATCACACAGTGC------GGATACCTGGCTGGTTTT------------------------------ 1260
..|| ||| ||.|| ||| |.||.|| .||.|
Sbjct 608 TCCT-----TCA---AGAGCCCAAGAGGA-ATCTCGC--CTTCTTCCAGCTGAGGAAGGTGTGGGGCCAGGTCT 670
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 671 GGCACAGCATCCAGACCCTGAAGGAAGATTGCAACCGGCTGCAGCAGGGACAGCGAGCCGCCATGATGAATCTC 744
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 745 CTCCGAAACAACAGCTGCCTCTCCAAAATGAAGAATTCCATGGCTTCCATGTCTCAGCAGCTCAAGGCCAAGTT 818
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 819 GGATTTCTTCAAAACCAGCATCCAGATTGACCTGGAGAAGTACAGCGAGCAAACCGAGTTTGGGATCACATCAG 892
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 893 ATAAACTGCTGCTGGCCTGGAGGGAAATGGAGCAGGCTGTGGAGCTCTGTGGGCGGGAGAACGAAGTGAAACTC 966
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 967 CTGGTAGAACGGATGATGGCTCTGCAGACCGACATTGTGGACTTACAGAGGAGCCCCATGGGCCGGAAGCAGGG 1040
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1041 GGGAACGCTGGACGACCTAGAGGAGCAAGCAAGGGAGCTGTACAGGAGACTAAGGGAAAAACCTCGAGACCAGC 1114
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1115 GAACTGAGGGTGACAGTCAGGAAATGGTACGGCTGCTGCTTCAGGCAATTCAGAGCTTCGAGAAGAAAGTGCGA 1188
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1189 GTGATCTATACGCAGCTCAGTAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAACTGTTGCCCAAGGTGGAAGA 1262
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1263 GGTGGTGAGCTTAATGAATGAGGATGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAGGAGCTCTGGA 1336
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1337 ATCTCCTGAAGATTGCTTGTAGCAAGGTCCGTGGTCCTGTCAGTGGAAGCCCGGATAGCATGAATGCCTCTCGA 1410
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1411 CTTAGCCAGCCTGGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCAACAGCTTACCTGAGCCAGCCAAGAAGAG 1484
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1485 TGAAGAACTGGTGGCTGAAGCACATAACCTCTGCACCCTGCTAGAAAATGCCATACAGGACACTGTGAGGGAAC 1558
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1559 AAGACCAGAGTTTCACGGTAACAGCTTGTGTGAGACTCCTGCGATTCCATGTCCTTTCTTTCTATGGCAAAATA 1632
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1633 GAAGAGAAAATGGAAATGCAATCTGGCATTATCCTCAACCTCAGTGTTTGTTTGTTTGCTTGTTTATTTGTGAC 1706
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1707 AGGGTCTCTCTCTCTCACCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACCTCCGCTTCCCGGGT 1780
Query 1261 ----- 1260
Sbjct 1781 TCAAG 1785
