Nucleotide Global Alignment
Description
- Query:
- TRCN0000477990
- Subject:
- XM_011544518.2
- Aligned Length:
- 2447
- Identities:
- 1055
- Gaps:
- 1369
Alignment
Query 1 ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGG 74
Query 75 ATTTGGAAATGTCATCCGATGGCACAATCAGGAAACAGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATTTGGAAATGTCATCCGATGGCACAATCAGGAAACAGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGC 148
Query 149 TCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGATCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGATCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTG 222
Query 223 GCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTG 296
Query 297 CCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTTTGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTTTGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCA 370
Query 371 CCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACCTTCATGAAAACAGAATCATCCATCGGGATCTAAAGCCA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACCTTCATGAAAACAGAATCATCCATCGGGATCTAAAGCCA 444
Query 445 GAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGACCTAGGATATGCCAAGGAGCT 518
|||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 445 GAAAACATCGTCCTGCAGCAAGGAGAACAGAG-------------------------GGATATGCCAAGGAGCT 493
Query 519 GGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAGA 592
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 494 GGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACC--------------------------- 540
Query 593 AGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTTC 666
Sbjct 541 -------------------------------------------------------------------------- 540
Query 667 CTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 ------------------------TGGCATTCAAAAGTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGA 590
Query 741 AGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 AGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGC 664
Query 815 GACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 GACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCC 738
Query 889 AATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 AATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCAC 812
Query 963 CATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 CATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCA 886
Query 1037 TCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGT 960
Query 1111 ATTTCAGACGGCAAG----GTGAGCCCTGGCTTCGTACACAC----------CATCCTGTTTACCTTGGCTGTG 1170
||||||||||||||| .|||| ||| ||||| .|||.||||| ||..||.||
Sbjct 961 ATTTCAGACGGCAAGTTAAATGAG----GGC------CACACATTGGACATGGATCTTGTTT---TTCTCTTTG 1021
Query 1171 CCTCCTGGGAAACTCAAC----ACACTTTCAGATTT-----------CAATTCTGCTT-----TGTCA--TGTA 1222
.|..| .|.|||.|||.| |.|| ||||||.| ||| |.| ||||| ||||
Sbjct 1022 ACAAC-AGTAAAATCACCTATGAGAC--TCAGATCTCCCCACGGCCCCAA-----CCTGAAAGTGTCAGCTGTA 1087
Query 1223 GTCTGTTAATCACACAGTGC------GGATACCTGGCTGGTTTT------------------------------ 1260
..|| ||| ||.|| ||| |.||.|| .||.|
Sbjct 1088 TCCT-----TCA---AGAGCCCAAGAGGA-ATCTCGC--CTTCTTCCAGCTGAGGAAGGTGTGGGGCCAGGTCT 1150
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1151 GGCACAGCATCCAGACCCTGAAGGAAGATTGCAACCGGCTGCAGCAGGGACAGCGAGCCGCCATGATGAATCTC 1224
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1225 CTCCGAAACAACAGCTGCCTCTCCAAAATGAAGAATTCCATGGCTTCCATGTCTCAGCAGCTCAAGGCCAAGTT 1298
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1299 GGATTTCTTCAAAACCAGCATCCAGATTGACCTGGAGAAGTACAGCGAGCAAACCGAGTTTGGGATCACATCAG 1372
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1373 ATAAACTGCTGCTGGCCTGGAGGGAAATGGAGCAGGCTGTGGAGCTCTGTGGGCGGGAGAACGAAGTGAAACTC 1446
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1447 CTGGTAGAACGGATGATGGCTCTGCAGACCGACATTGTGGACTTACAGAGGAGCCCCATGGGCCGGAAGCAGGG 1520
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1521 GGGAACGCTGGACGACCTAGAGGAGCAAGCAAGGGAGCTGTACAGGAGACTAAGGGAAAAACCTCGAGACCAGC 1594
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1595 GAACTGAGGGTGACAGTCAGGAAATGGTACGGCTGCTGCTTCAGGCAATTCAGAGCTTCGAGAAGAAAGTGCGA 1668
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1669 GTGATCTATACGCAGCTCAGTAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAACTGTTGCCCAAGGTGGAAGA 1742
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1743 GGTGGTGAGCTTAATGAATGAGGATGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAGGAGCTCTGGA 1816
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1817 ATCTCCTGAAGATTGCTTGTAGCAAGGTCCGTGGTCCTGTCAGTGGAAGCCCGGATAGCATGAATGCCTCTCGA 1890
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1891 CTTAGCCAGCCTGGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCAACAGCTTACCTGAGCCAGCCAAGAAGAG 1964
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1965 TGAAGAACTGGTGGCTGAAGCACATAACCTCTGCACCCTGCTAGAAAATGCCATACAGGACACTGTGAGGGAAC 2038
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2039 AAGACCAGAGTTTCACGGTAACAGCTTGTGTGAGACTCCTGCGATTCCATGTCCTTTCTTTCTATGGCAAAATA 2112
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2113 GAAGAGAAAATGGAAATGCAATCTGGCATTATCCTCAACCTCAGTGTTTGTTTGTTTGCTTGTTTATTTGTGAC 2186
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2187 AGGGTCTCTCTCTCTCACCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACCTCCGCTTCCCGGGT 2260
Query 1261 ----- 1260
Sbjct 2261 TCAAG 2265
