Nucleotide Global Alignment

Description

Query:
TRCN0000478116
Subject:
NM_153081.3
Aligned Length:
1420
Identities:
1135
Gaps:
86

Alignment

Query    1  ATGCCAGCTCCCCAGCGGAAGCACAGGCGTGGAGGCTTCTCTCACAGATGTTTCCCCACCCCGCAGACGGCGAT  74
                                                                                    ||
Sbjct    1  ------------------------------------------------------------------------AT  2

Query   75  GACCCCCCAGCCCGCCGGACCCCCGGATGGGGGCTGGGGCTGGGTGGTGGCGGCCGCAGCCTTCGCGATAAACG  148
            |||||||.||||.||||||||||||||.||||||||||||||||||||||||||||||||.|||||..|.||||
Sbjct    3  GACCCCCAAGCCGGCCGGACCCCCGGACGGGGGCTGGGGCTGGGTGGTGGCGGCCGCAGCATTCGCCGTGAACG  76

Query  149  GGCTGTCCTACGGGCTGCTGCGCTCGCTGGGCCTTGCCTTCCCTGACCTTGCCGAGCACTTTGACCGAAGCGCC  222
            ||||.|||||||||||..|.|||||.||||||||||||.||||.|||||.||.|||||||||||.|||||||||
Sbjct   77  GGCTCTCCTACGGGCTCTTACGCTCCCTGGGCCTTGCCCTCCCCGACCTCGCGGAGCACTTTGAACGAAGCGCC  150

Query  223  CAGGACACTGCGTGGATCAGCGCCCTGGCCCTGGCCGTGCAGCAGGCAGCCAGCCCTGTGGGCAGCGCCCTGAG  296
            |||||||||||||||.||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||||
Sbjct  151  CAGGACACTGCGTGGGTCAGCGCCCTGGCCTTGGCCGTGCAGCAGGCAGCCAGCCCAGTGGGCAGCGCCCTGAG  224

Query  297  CACGCGCTGGGGGGCCCGCCCCGTGGTGATGGTTGGGGGCGTCCTCGCCTCGCTGGGCTTCGTCTTCTCGGCTT  370
            |||.|||||||||||.|||||||||||||||||||||||.|||||..|||||||.|||||.|||||||||||||
Sbjct  225  CACTCGCTGGGGGGCACGCCCCGTGGTGATGGTTGGGGGAGTCCTAACCTCGCTTGGCTTGGTCTTCTCGGCTT  298

Query  371  TCGCC---AGCGATCTGCTGCATCTCTACCTCGGCCTGGGCCTCCTCGCTGGCTTTGGTTGGGCCCTGGTGTTC  441
            |||||   |||   ||.|||||.|||||||||||||||||||||||||||||||.|||.||||||||||||||.
Sbjct  299  TCGCCCGAAGC---CTCCTGCACCTCTACCTCGGCCTGGGCCTCCTCGCTGGCTCTGGCTGGGCCCTGGTGTTT  369

Query  442  GCCCCCGCCCTAGGCACCCTCTCGCGTTACTTCTCCCGCCGTCGAGTCTTGGCGGTGGGGCTGGCGCTCACCGG  515
            |||||.|||||.||.||||||||.||.|||||||||||||||||.|||||||||||.|||.|||||||||||||
Sbjct  370  GCCCCAGCCCTGGGTACCCTCTCTCGGTACTTCTCCCGCCGTCGGGTCTTGGCGGTAGGGTTGGCGCTCACCGG  443

Query  516  CAACGGGGCCTCCTCGCTGCTCCTGGCGCCCGCCTTGCAGCTTCTTCTCGATACTTTCGGCTGGCGGGGCGCTC  589
            .||.|||||.|||||||||||||||||.||.|||||||||.|.||.||.||||||||||||||||||||.||..
Sbjct  444  TAATGGGGCATCCTCGCTGCTCCTGGCACCTGCCTTGCAGTTCCTCCTTGATACTTTCGGCTGGCGGGGTGCCT  517

Query  590  TGCTCCTCCTCGGCGCGATCACCCTCCACCTCACCCCCTGTGGCGCCCTGCTGCTACCCCTGGTCCTTCCTGGA  663
            ||||||||||.|||||..|||||||.||||||||.||||||||||||.||||...|||..|.|..||..||||.
Sbjct  518  TGCTCCTCCTTGGCGCTGTCACCCTTCACCTCACACCCTGTGGCGCCTTGCTAAGACCTTTAGCTCTCTCTGGT  591

Query  664  GACCCCCCAGCCCCACCGCGTAGTCCCCTAGCTGCCCTCGGCCTGAGTCTGTTCACACGCCGGGCCTTCTCAAT  737
            |||||.|..||||||||.||.|..||||||||||||||.|||||..|||||||||..|||||||||||.|||.|
Sbjct  592  GACCCGCTGGCCCCACCTCGCACCCCCCTAGCTGCCCTTGGCCTAGGTCTGTTCAAGCGCCGGGCCTTTTCAGT  665

Query  738  CTTTGCTCTAGGCACAGCCCTGGTTGGGGGCGGGTACTTCGTTCCTTACGTGCACTTGGCTCCCCACGCTTTAG  811
            |||||||.|.|||||.|||.||.|.||||||||.||||||||.||.|||||.||.||||.|||.||.|||||||
Sbjct  666  CTTTGCTTTGGGCACCGCCTTGATCGGGGGCGGATACTTCGTCCCCTACGTTCATTTGGGTCCGCATGCTTTAG  739

Query  812  ACCGGGGCCTGGGGGGATACGGAGCAGCGCTGGTGGTGGCCGTGGCTGCGATGGGGGATGCGGGCGCCCGGCTG  885
            |.|..|||.||||.||.||.||.||||||.|.||||||||.||.|||||..||||.|||||..|.|||||..||
Sbjct  740  ATCAAGGCATGGGTGGTTATGGGGCAGCGTTAGTGGTGGCTGTCGCTGCAGTGGGAGATGCCTGTGCCCGATTG  813

Query  886  GTCTGCGGGTGGCTGGCAGACCAAGGCTGGGTGCCCCTCCCGCGGCTGCTGGCCGTATTCGGGGCTCTGACTGG  959
            |.|.||||.||||||||||||||.||||||||||||||.|||.||||.||||..||.||.|||.||||||||||
Sbjct  814  GCCAGCGGATGGCTGGCAGACCAGGGCTGGGTGCCCCTTCCGAGGCTTCTGGTGGTGTTTGGGTCTCTGACTGG  887

Query  960  GCTGGGGCTGTGGGTGGTGGGGCTGGTGCCCGTGGTGGGCGGC-GAAGAGAGCTGGGGGGGTCCCCTGCTGGCC  1032
            |.|.|||.|....|...||||.||.||||||...||||| |.| ||.|||.|.|||||||.|||.|||||||||
Sbjct  888  GTTAGGGGTACTAGCAATGGGACTAGTGCCCACTGTGGG-GACAGAGGAGGGTTGGGGGGCTCCTCTGCTGGCC  960

Query 1033  GCGGCTGTGGCCTATGGGCTGAGCGCGGGGAGTTACGCCCCGCTGGTTTTCGGTGTACTCCCCGGGCTGGTGGG  1106
            ||.||||.||||||||||||||||||.||||||||.|||||.||||||||||||||.|||||.|||||||||||
Sbjct  961  GCTGCTGGGGCCTATGGGCTGAGCGCTGGGAGTTATGCCCCACTGGTTTTCGGTGTGCTCCCGGGGCTGGTGGG  1034

Query 1107  CGTCGGAGGTGTGGTGCAGGCCACAGGGCTGGTGATGATGCTGATGAGCCTCGGGGGGCTCCTGGGCCCTCCCC  1180
            |.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|
Sbjct 1035  CATTGGAGGTGTGGTGCAGGCCACAGGGCTGGTGATGATGCTGATGAGCCTCGGGGGACTCCTGGGCCCTCCTC  1108

Query 1181  TGTCAGGCTTCCTAAGGGATGAGACAGGAGACTTCACCGCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCC  1254
            ||||||||||||||||||||.|||||||||||||||..|||||||||||..|||...|.|||||.||||||||.
Sbjct 1109  TGTCAGGCTTCCTAAGGGATAAGACAGGAGACTTCAGTGCCTCTTTCCTGGTGTGCAGCTCTTTCATCCTCTCT  1182

Query 1255  GGCAGCTTCATCTACATAGGGTTGCCCAGGGCGCTGCCCTCCTGTGGTCCAGCCTCCCCTCCAGCCACGCCTCC  1328
            |||||.|||||||||||.|||.|||||||.||.||.||||||||..||||||||||.||||||||.||.|||||
Sbjct 1183  GGCAGTTTCATCTACATGGGGCTGCCCAGAGCCCTCCCCTCCTGCCGTCCAGCCTCACCTCCAGCAACCCCTCC  1256

Query 1329  CCCAGAGACGGGGGAGCTGCTTCCCGCTCCCCAGGCAGTCT---TGCTGTCCCCAGGAGGCCCTGGCTCCACTC  1399
            .|||||||..|||||||||||.||.|.|||.||   |||||   ||||.|||.||||.||..|||||||||..|
Sbjct 1257  ACCAGAGAGAGGGGAGCTGCTCCCAGTTCCACA---AGTCTCCCTGCTTTCCGCAGGGGGTACTGGCTCCATCC  1327

Query 1400  TGGACACCACTTGT  1413
            .|||.|||||||||
Sbjct 1328  GGGATACCACTTGT  1341

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.